C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y44E3B.1

Gene ID Gene Name Reads Transcripts Annotation
Y44E3B.1 zip-4 2998 Y44E3B.1a.1, Y44E3B.1a.2, Y44E3B.1b.1, Y44E3B.1b.2, Y44E3B.1c bZIP transcription factor family [Source:RefSeq peptide;Acc:NP_491132]

Genes with expression patterns similar to Y44E3B.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y44E3B.1 zip-4 2998 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bZIP transcription factor family [Source:RefSeq peptide;Acc:NP_491132]
2. K02F2.1 dpf-3 11465 7.524 0.924 0.923 0.958 0.923 0.969 0.987 0.911 0.929 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
3. T24F1.2 samp-1 8422 7.52 0.959 0.949 0.954 0.949 0.981 0.979 0.885 0.864 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
4. K10C3.2 ensa-1 19836 7.518 0.953 0.951 0.973 0.951 0.952 0.961 0.896 0.881 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
5. T10F2.3 ulp-1 8351 7.516 0.938 0.945 0.962 0.945 0.934 0.968 0.910 0.914 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
6. ZK858.1 gld-4 14162 7.511 0.957 0.942 0.966 0.942 0.964 0.986 0.864 0.890 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
7. T09B4.1 pigv-1 13282 7.507 0.882 0.964 0.935 0.964 0.985 0.969 0.912 0.896 GPI mannosyltransferase pigv-1 [Source:UniProtKB/Swiss-Prot;Acc:O02164]
8. K08D12.1 pbs-1 21677 7.488 0.939 0.932 0.956 0.932 0.949 0.960 0.927 0.893 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
9. F16D3.2 rsd-6 8211 7.482 0.937 0.948 0.966 0.948 0.935 0.973 0.872 0.903
10. Y55D9A.1 efa-6 10012 7.481 0.920 0.943 0.971 0.943 0.946 0.969 0.890 0.899 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
11. F36D4.3 hum-2 16493 7.481 0.942 0.949 0.971 0.949 0.937 0.980 0.879 0.874 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
12. F41E6.9 vps-60 4469 7.48 0.925 0.965 0.955 0.965 0.932 0.948 0.924 0.866 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
13. R02D3.5 fnta-1 5258 7.479 0.939 0.937 0.942 0.937 0.980 0.976 0.898 0.870 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
14. Y113G7B.23 swsn-1 13766 7.477 0.932 0.938 0.947 0.938 0.966 0.962 0.911 0.883 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
15. F32A5.1 ada-2 8343 7.474 0.925 0.954 0.968 0.954 0.969 0.982 0.843 0.879 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
16. D1081.9 D1081.9 3792 7.469 0.917 0.962 0.952 0.962 0.953 0.965 0.916 0.842
17. T07F8.3 gld-3 9324 7.468 0.968 0.952 0.962 0.952 0.966 0.971 0.853 0.844 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
18. F26E4.11 hrdl-1 14721 7.467 0.923 0.952 0.980 0.952 0.955 0.962 0.875 0.868 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
19. C17E4.10 C17E4.10 7034 7.467 0.933 0.953 0.960 0.953 0.969 0.963 0.868 0.868
20. ZC518.3 ccr-4 15531 7.466 0.941 0.941 0.960 0.941 0.962 0.949 0.902 0.870 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
21. Y71D11A.2 smr-1 4976 7.465 0.933 0.917 0.971 0.917 0.976 0.965 0.923 0.863 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
22. F39H11.5 pbs-7 13631 7.465 0.946 0.917 0.947 0.917 0.961 0.959 0.921 0.897 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
23. CD4.4 vps-37 4265 7.464 0.929 0.928 0.948 0.928 0.965 0.976 0.918 0.872 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_504474]
24. C50A2.2 cec-2 4169 7.464 0.937 0.937 0.973 0.937 0.973 0.935 0.849 0.923 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
25. R144.4 wip-1 14168 7.464 0.941 0.938 0.977 0.938 0.967 0.953 0.903 0.847 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
26. W01B6.9 ndc-80 4670 7.463 0.909 0.948 0.965 0.948 0.958 0.955 0.904 0.876 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
27. K10B2.1 lin-23 15896 7.462 0.946 0.945 0.976 0.945 0.919 0.954 0.864 0.913 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
28. F57B1.2 sun-1 5721 7.462 0.955 0.961 0.936 0.961 0.973 0.958 0.913 0.805 Sun domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20924]
29. ZK973.3 pdp-1 3966 7.462 0.934 0.950 0.974 0.950 0.955 0.952 0.913 0.834 Pyruvate Dehydrogenase Phosphatase homolog [Source:RefSeq peptide;Acc:NP_491357]
30. ZK20.3 rad-23 35070 7.458 0.947 0.944 0.954 0.944 0.935 0.957 0.899 0.878
31. F35G12.8 smc-4 6202 7.457 0.941 0.924 0.953 0.924 0.982 0.970 0.878 0.885 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
32. T06D8.8 rpn-9 11282 7.457 0.965 0.946 0.952 0.946 0.919 0.963 0.906 0.860 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
33. Y47G6A.20 rnp-6 5542 7.456 0.889 0.945 0.924 0.945 0.969 0.961 0.946 0.877 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
34. W03F9.5 ttb-1 8682 7.455 0.932 0.917 0.963 0.917 0.976 0.977 0.881 0.892 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
35. C36B1.8 gls-1 8617 7.454 0.939 0.925 0.964 0.925 0.988 0.975 0.884 0.854 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
36. T10C6.4 srx-44 8454 7.451 0.933 0.925 0.957 0.925 0.973 0.978 0.873 0.887 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
37. C09G4.3 cks-1 17852 7.45 0.945 0.935 0.965 0.935 0.979 0.961 0.908 0.822 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
38. ZK1098.8 mut-7 4940 7.449 0.935 0.945 0.960 0.945 0.978 0.929 0.933 0.824 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
39. C39E9.13 rfc-3 9443 7.449 0.974 0.946 0.977 0.946 0.985 0.924 0.915 0.782 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
40. B0334.5 B0334.5 4713 7.446 0.959 0.919 0.982 0.919 0.945 0.955 0.906 0.861
41. F46F11.10 F46F11.10 968 7.444 0.928 0.943 0.973 0.943 0.960 0.956 0.913 0.828
42. T17E9.1 kin-18 8172 7.442 0.930 0.920 0.972 0.920 0.948 0.955 0.910 0.887 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
43. F18E2.3 scc-3 13464 7.442 0.922 0.927 0.967 0.927 0.953 0.962 0.911 0.873 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
44. Y53C12A.4 mop-25.2 7481 7.441 0.948 0.960 0.954 0.960 0.935 0.973 0.855 0.856 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
45. F39B2.11 mtx-1 8526 7.441 0.932 0.937 0.923 0.937 0.952 0.965 0.880 0.915 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
46. Y11D7A.12 flh-1 4612 7.441 0.927 0.962 0.970 0.962 0.965 0.956 0.876 0.823 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
47. F58B6.3 par-2 3914 7.44 0.927 0.953 0.962 0.953 0.954 0.961 0.887 0.843
48. F44B9.8 F44B9.8 1978 7.439 0.941 0.947 0.953 0.947 0.951 0.962 0.879 0.859 Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]
49. T12D8.6 mlc-5 19567 7.439 0.946 0.964 0.943 0.964 0.947 0.947 0.864 0.864 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
50. T06D10.2 chaf-1 8121 7.438 0.899 0.961 0.960 0.961 0.944 0.945 0.877 0.891 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
51. ZK1127.4 ZK1127.4 3088 7.436 0.953 0.900 0.956 0.900 0.981 0.939 0.938 0.869 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
52. T09A5.8 cec-3 5813 7.435 0.926 0.947 0.964 0.947 0.952 0.954 0.898 0.847 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
53. C18G1.5 hil-4 21692 7.435 0.951 0.939 0.971 0.939 0.981 0.925 0.902 0.827 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
54. T20B12.2 tbp-1 9014 7.434 0.951 0.962 0.975 0.962 0.944 0.941 0.825 0.874 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
55. F17C11.10 F17C11.10 4355 7.433 0.917 0.921 0.939 0.921 0.979 0.966 0.943 0.847
56. H31G24.4 cyb-2.2 14285 7.432 0.931 0.944 0.936 0.944 0.956 0.955 0.921 0.845 CYclin B [Source:RefSeq peptide;Acc:NP_491297]
57. R01H2.6 ubc-18 13394 7.427 0.954 0.939 0.948 0.939 0.960 0.964 0.871 0.852 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
58. C36B1.4 pas-4 13140 7.426 0.921 0.939 0.943 0.939 0.955 0.984 0.887 0.858 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
59. F41E6.4 smk-1 22394 7.421 0.879 0.934 0.952 0.934 0.949 0.983 0.898 0.892 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
60. Y71G12B.1 chaf-2 3451 7.42 0.955 0.925 0.926 0.925 0.963 0.949 0.940 0.837 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
61. Y73F8A.34 tag-349 7966 7.42 0.947 0.928 0.977 0.928 0.969 0.958 0.892 0.821
62. T10F2.4 prp-19 11298 7.42 0.928 0.901 0.941 0.901 0.985 0.975 0.890 0.899 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
63. T12E12.4 drp-1 7694 7.419 0.930 0.950 0.969 0.950 0.959 0.983 0.859 0.819 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
64. F23B2.6 aly-2 7301 7.419 0.961 0.915 0.938 0.915 0.967 0.971 0.911 0.841 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
65. T23B12.4 natc-1 7759 7.418 0.922 0.933 0.958 0.933 0.970 0.922 0.907 0.873 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
66. T12D8.3 acbp-5 6816 7.418 0.926 0.916 0.959 0.916 0.962 0.969 0.912 0.858 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
67. C47G2.5 saps-1 7555 7.418 0.931 0.953 0.951 0.953 0.951 0.967 0.895 0.817 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
68. T05H10.2 apn-1 5628 7.418 0.928 0.957 0.967 0.957 0.931 0.951 0.887 0.840 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
69. F25B3.1 ehbp-1 6409 7.418 0.943 0.950 0.953 0.950 0.937 0.946 0.844 0.895 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
70. C27F2.10 C27F2.10 4214 7.417 0.931 0.955 0.944 0.955 0.959 0.952 0.848 0.873 PCI domain-containing protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95QU0]
71. Y17G9B.3 cyp-31A3 1709 7.417 0.980 0.957 0.942 0.957 0.928 0.921 0.884 0.848 CYtochrome P450 family [Source:RefSeq peptide;Acc:NP_500637]
72. F35B12.5 sas-5 4606 7.417 0.932 0.962 0.956 0.962 0.954 0.952 0.885 0.814 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
73. CD4.6 pas-6 18332 7.412 0.966 0.918 0.950 0.918 0.959 0.966 0.890 0.845 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
74. B0025.2 csn-2 5205 7.412 0.893 0.932 0.931 0.932 0.957 0.954 0.911 0.902 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
75. Y56A3A.20 ccf-1 18463 7.41 0.941 0.927 0.944 0.927 0.978 0.943 0.890 0.860 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
76. ZK328.5 npp-10 7652 7.41 0.919 0.907 0.956 0.907 0.977 0.960 0.916 0.868 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
77. C09G4.1 hyl-1 8815 7.409 0.904 0.934 0.939 0.934 0.953 0.969 0.880 0.896 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
78. VW02B12L.3 ebp-2 12251 7.408 0.956 0.969 0.951 0.969 0.950 0.956 0.832 0.825 microtubule End Binding Protein [Source:RefSeq peptide;Acc:NP_496438]
79. T21B10.5 set-17 5292 7.406 0.942 0.897 0.958 0.897 0.957 0.987 0.912 0.856 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_495902]
80. T05F1.6 hsr-9 13312 7.406 0.899 0.921 0.957 0.921 0.981 0.949 0.904 0.874
81. C25A1.5 C25A1.5 9135 7.405 0.925 0.944 0.947 0.944 0.937 0.980 0.889 0.839
82. R07G3.5 pgam-5 11646 7.404 0.938 0.930 0.946 0.930 0.971 0.967 0.912 0.810 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
83. F56A8.6 cpf-2 2730 7.404 0.900 0.917 0.934 0.917 0.980 0.961 0.900 0.895 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
84. C09G12.9 tsg-101 9451 7.403 0.951 0.905 0.964 0.905 0.944 0.950 0.909 0.875 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
85. T04A8.14 emb-5 11746 7.403 0.933 0.941 0.951 0.941 0.980 0.958 0.888 0.811 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
86. Y56A3A.1 ntl-3 10450 7.402 0.918 0.927 0.929 0.927 0.939 0.956 0.926 0.880 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
87. K07C5.8 cash-1 10523 7.4 0.937 0.942 0.947 0.942 0.951 0.950 0.892 0.839 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
88. C07A9.3 tlk-1 12572 7.399 0.935 0.949 0.974 0.949 0.943 0.929 0.798 0.922 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
89. C05C8.4 gei-6 6026 7.398 0.904 0.921 0.943 0.921 0.966 0.970 0.889 0.884 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
90. C47D12.1 trr-1 4646 7.397 0.911 0.936 0.957 0.936 0.987 0.912 0.855 0.903 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
91. D2089.1 rsp-7 11057 7.397 0.928 0.935 0.955 0.935 0.955 0.990 0.856 0.843 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
92. F28F8.6 atx-3 1976 7.395 0.901 0.965 0.945 0.965 0.918 0.950 0.881 0.870 Ataxin-3 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17850]
93. D1007.7 nrd-1 6738 7.395 0.927 0.929 0.969 0.929 0.937 0.956 0.904 0.844 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
94. C36B1.3 rpb-3 4442 7.394 0.952 0.934 0.957 0.934 0.962 0.946 0.923 0.786 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
95. T01G9.4 npp-2 5361 7.393 0.893 0.949 0.944 0.949 0.959 0.930 0.926 0.843 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
96. F25H2.8 ubc-25 12368 7.392 0.937 0.944 0.962 0.944 0.930 0.933 0.871 0.871 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
97. T05E11.4 spo-11 2806 7.391 0.957 0.930 0.927 0.930 0.965 0.956 0.878 0.848 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
98. T07A9.6 daf-18 15998 7.391 0.890 0.961 0.944 0.961 0.934 0.942 0.892 0.867 DAF-18; DAF-18 protein; PTEN phosphatidylinositol 3' phosphatase homolog DAF-18; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EE01]
99. EEED8.16 brap-2 3123 7.39 0.888 0.923 0.924 0.923 0.969 0.952 0.883 0.928 BRCA1-associated protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q95QN6]
100. T19B10.7 ima-1 2306 7.389 0.935 0.951 0.956 0.951 0.923 0.971 0.827 0.875 Importin subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22560]

There are 1912 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA