C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F28F8.6

Gene ID Gene Name Reads Transcripts Annotation
F28F8.6 atx-3 1976 F28F8.6.1, F28F8.6.2 Ataxin-3 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17850]

Genes with expression patterns similar to F28F8.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28F8.6 atx-3 1976 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ataxin-3 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17850]
2. F16D3.2 rsd-6 8211 7.648 0.963 0.957 0.949 0.957 0.963 0.980 0.956 0.923
3. Y50E8A.4 unc-61 8599 7.633 0.975 0.966 0.952 0.966 0.941 0.970 0.947 0.916
4. T06D10.2 chaf-1 8121 7.617 0.939 0.974 0.970 0.974 0.949 0.948 0.940 0.923 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
5. F11A10.1 lex-1 13720 7.617 0.951 0.953 0.969 0.953 0.957 0.973 0.974 0.887 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
6. Y55D9A.1 efa-6 10012 7.616 0.972 0.955 0.972 0.955 0.969 0.968 0.946 0.879 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
7. F35B12.5 sas-5 4606 7.614 0.969 0.968 0.959 0.968 0.926 0.959 0.942 0.923 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
8. C09G9.6 oma-1 18743 7.613 0.978 0.952 0.973 0.952 0.951 0.957 0.949 0.901
9. F23B2.6 aly-2 7301 7.61 0.973 0.940 0.968 0.940 0.965 0.980 0.928 0.916 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
10. C14B9.4 plk-1 18785 7.594 0.942 0.957 0.975 0.957 0.940 0.961 0.956 0.906 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
11. K10B2.5 ani-2 11397 7.586 0.933 0.954 0.982 0.954 0.937 0.923 0.967 0.936 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
12. C12D8.10 akt-1 12100 7.583 0.955 0.969 0.968 0.969 0.911 0.937 0.967 0.907 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
13. ZC404.9 gck-2 8382 7.578 0.926 0.941 0.955 0.941 0.964 0.970 0.946 0.935 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
14. C25A1.5 C25A1.5 9135 7.573 0.950 0.960 0.947 0.960 0.918 0.969 0.944 0.925
15. F25H2.8 ubc-25 12368 7.566 0.985 0.945 0.942 0.945 0.934 0.945 0.938 0.932 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
16. C13B4.2 usp-14 9000 7.566 0.945 0.943 0.971 0.943 0.965 0.944 0.943 0.912 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
17. F57C2.6 spat-1 5615 7.565 0.986 0.968 0.960 0.968 0.980 0.986 0.877 0.840 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
18. F37A4.8 isw-1 9337 7.561 0.943 0.943 0.955 0.943 0.964 0.970 0.927 0.916 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
19. W09C5.2 unc-59 5784 7.56 0.982 0.975 0.968 0.975 0.924 0.950 0.937 0.849
20. C03E10.4 gly-20 10739 7.559 0.960 0.962 0.945 0.962 0.934 0.946 0.932 0.918 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
21. C05C10.6 ufd-3 6304 7.558 0.953 0.950 0.937 0.950 0.938 0.956 0.966 0.908 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
22. F10G7.4 scc-1 2767 7.554 0.939 0.932 0.957 0.932 0.955 0.962 0.950 0.927 Sister chromatid cohesion protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19325]
23. K10B2.1 lin-23 15896 7.553 0.973 0.959 0.969 0.959 0.923 0.951 0.957 0.862 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
24. Y49E10.19 ani-1 12757 7.548 0.922 0.958 0.967 0.958 0.901 0.954 0.980 0.908 Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
25. C29E4.2 kle-2 5527 7.54 0.939 0.944 0.934 0.944 0.954 0.973 0.978 0.874 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
26. M03D4.1 zen-4 8185 7.536 0.959 0.955 0.961 0.955 0.929 0.968 0.884 0.925 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
27. R01H2.6 ubc-18 13394 7.53 0.915 0.955 0.970 0.955 0.934 0.969 0.931 0.901 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
28. C17D12.1 dhhc-7 6002 7.527 0.964 0.941 0.949 0.941 0.936 0.927 0.933 0.936 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_492960]
29. F55B12.3 sel-10 10304 7.526 0.923 0.953 0.956 0.953 0.947 0.939 0.913 0.942 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
30. B0348.6 ife-3 26859 7.524 0.878 0.947 0.957 0.947 0.970 0.970 0.925 0.930 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
31. Y43F4B.6 klp-19 13220 7.524 0.974 0.956 0.976 0.956 0.903 0.928 0.938 0.893 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_499742]
32. F18E2.3 scc-3 13464 7.523 0.929 0.943 0.946 0.943 0.959 0.975 0.938 0.890 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
33. T17E9.1 kin-18 8172 7.522 0.969 0.926 0.972 0.926 0.929 0.946 0.927 0.927 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
34. Y94H6A.9 ubxn-2 7082 7.521 0.904 0.964 0.947 0.964 0.947 0.950 0.934 0.911 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
35. F01G4.1 swsn-4 14710 7.518 0.964 0.950 0.963 0.950 0.941 0.941 0.907 0.902 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
36. T01G9.4 npp-2 5361 7.516 0.925 0.965 0.959 0.965 0.966 0.958 0.894 0.884 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
37. T09B4.1 pigv-1 13282 7.515 0.960 0.965 0.950 0.965 0.926 0.934 0.925 0.890 GPI mannosyltransferase pigv-1 [Source:UniProtKB/Swiss-Prot;Acc:O02164]
38. C17E4.5 pabp-2 12843 7.514 0.933 0.935 0.943 0.935 0.917 0.975 0.955 0.921 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
39. D1081.9 D1081.9 3792 7.51 0.904 0.952 0.922 0.952 0.953 0.971 0.924 0.932
40. D1007.7 nrd-1 6738 7.509 0.907 0.932 0.972 0.932 0.960 0.971 0.967 0.868 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
41. Y73F8A.34 tag-349 7966 7.505 0.943 0.952 0.967 0.952 0.959 0.963 0.880 0.889
42. F26H11.1 kbp-3 4177 7.502 0.941 0.918 0.957 0.918 0.944 0.965 0.962 0.897 Kinetochore-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O45406]
43. T06D8.8 rpn-9 11282 7.5 0.938 0.950 0.970 0.950 0.920 0.967 0.919 0.886 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
44. T05G5.3 cdk-1 14112 7.5 0.942 0.953 0.971 0.953 0.925 0.948 0.917 0.891 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
45. W01B6.9 ndc-80 4670 7.499 0.963 0.954 0.933 0.954 0.930 0.975 0.884 0.906 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
46. F31E3.4 panl-2 3371 7.498 0.948 0.969 0.923 0.969 0.940 0.957 0.917 0.875 PAN (PolyA-specific riboNucLease) subunit [Source:RefSeq peptide;Acc:NP_498519]
47. T28F3.1 nra-1 7034 7.494 0.927 0.947 0.935 0.947 0.944 0.941 0.957 0.896 Nicotinic receptor-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB9]
48. D1022.7 aka-1 10681 7.492 0.956 0.934 0.966 0.934 0.953 0.933 0.925 0.891 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
49. T07A9.6 daf-18 15998 7.492 0.958 0.963 0.942 0.963 0.942 0.943 0.927 0.854 DAF-18; DAF-18 protein; PTEN phosphatidylinositol 3' phosphatase homolog DAF-18; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EE01]
50. Y54G9A.6 bub-3 9123 7.491 0.941 0.939 0.959 0.939 0.944 0.975 0.884 0.910 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
51. T06D8.6 cchl-1 26292 7.491 0.914 0.939 0.927 0.939 0.940 0.967 0.962 0.903 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
52. C34G6.5 cdc-7 2956 7.487 0.965 0.938 0.965 0.938 0.920 0.934 0.950 0.877 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491705]
53. T12E12.1 T12E12.1 7629 7.485 0.910 0.968 0.964 0.968 0.917 0.947 0.916 0.895 Probable protein ariadne-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22431]
54. F35G12.8 smc-4 6202 7.482 0.900 0.930 0.966 0.930 0.936 0.960 0.952 0.908 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
55. K08D12.1 pbs-1 21677 7.482 0.924 0.952 0.964 0.952 0.931 0.930 0.940 0.889 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
56. Y43C5A.6 rad-51 5327 7.481 0.939 0.920 0.937 0.920 0.961 0.946 0.946 0.912 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
57. Y39A1B.3 dpy-28 4459 7.479 0.952 0.932 0.963 0.932 0.938 0.973 0.921 0.868 Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
58. T10F2.3 ulp-1 8351 7.478 0.904 0.946 0.980 0.946 0.941 0.976 0.886 0.899 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
59. C47D12.8 xpf-1 6173 7.477 0.926 0.967 0.953 0.967 0.938 0.966 0.910 0.850 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
60. R13F6.1 kbp-1 1218 7.476 0.970 0.956 0.923 0.956 0.918 0.954 0.934 0.865 KNL (kinetochore null) Binding Protein [Source:RefSeq peptide;Acc:NP_001293639]
61. C50A2.2 cec-2 4169 7.475 0.940 0.957 0.964 0.957 0.955 0.988 0.787 0.927 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
62. T10B5.6 knl-3 3516 7.475 0.883 0.964 0.943 0.964 0.951 0.969 0.890 0.911 Kinetochore NuLl [Source:RefSeq peptide;Acc:NP_503520]
63. F42A9.2 lin-49 6940 7.474 0.927 0.938 0.971 0.938 0.960 0.928 0.908 0.904
64. C39E9.12 C39E9.12 3588 7.472 0.893 0.936 0.923 0.936 0.940 0.988 0.925 0.931
65. ZK287.5 rbx-1 13546 7.471 0.949 0.928 0.963 0.928 0.964 0.947 0.893 0.899 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
66. Y92C3B.2 uaf-1 14981 7.47 0.925 0.926 0.917 0.926 0.960 0.960 0.945 0.911 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
67. C47D12.1 trr-1 4646 7.47 0.913 0.938 0.954 0.938 0.937 0.935 0.935 0.920 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
68. F21H12.6 tpp-2 4159 7.469 0.919 0.927 0.920 0.927 0.966 0.956 0.942 0.912 Tripeptidyl-peptidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09541]
69. C04A2.7 dnj-5 9618 7.468 0.978 0.955 0.936 0.955 0.942 0.958 0.885 0.859 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
70. T07F8.3 gld-3 9324 7.467 0.957 0.966 0.962 0.966 0.932 0.981 0.838 0.865 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
71. C09G4.1 hyl-1 8815 7.467 0.938 0.956 0.923 0.956 0.936 0.939 0.928 0.891 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
72. C50C3.8 bath-42 18053 7.467 0.943 0.962 0.950 0.962 0.941 0.955 0.888 0.866 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
73. C54G10.2 rfc-1 8814 7.466 0.947 0.931 0.956 0.931 0.927 0.934 0.916 0.924 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
74. ZC404.3 spe-39 7397 7.466 0.953 0.960 0.977 0.960 0.885 0.910 0.908 0.913 Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
75. F12F6.3 rib-1 10524 7.466 0.958 0.939 0.953 0.939 0.936 0.946 0.897 0.898 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
76. R06C1.1 hda-3 1998 7.464 0.916 0.951 0.962 0.951 0.920 0.929 0.926 0.909 Histone deacetylase [Source:RefSeq peptide;Acc:NP_493026]
77. F59B2.7 rab-6.1 10749 7.464 0.888 0.914 0.946 0.914 0.943 0.980 0.962 0.917 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
78. ZK328.5 npp-10 7652 7.463 0.947 0.925 0.951 0.925 0.937 0.982 0.912 0.884 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
79. ZK858.1 gld-4 14162 7.462 0.936 0.943 0.975 0.943 0.918 0.948 0.922 0.877 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
80. B0334.5 B0334.5 4713 7.461 0.951 0.933 0.970 0.933 0.935 0.932 0.940 0.867
81. T20H4.4 adr-2 5495 7.46 0.908 0.936 0.946 0.936 0.965 0.974 0.940 0.855 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
82. F46F11.10 F46F11.10 968 7.458 0.909 0.938 0.955 0.938 0.957 0.980 0.897 0.884
83. F18A1.5 rpa-1 3109 7.458 0.958 0.944 0.954 0.944 0.951 0.954 0.876 0.877 Probable replication factor A 73 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19537]
84. F32B6.8 tbc-3 9252 7.458 0.949 0.964 0.941 0.964 0.934 0.909 0.957 0.840 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
85. T27A3.2 usp-5 11388 7.457 0.917 0.942 0.936 0.942 0.952 0.949 0.918 0.901 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
86. Y39H10A.7 chk-1 3350 7.457 0.932 0.952 0.942 0.952 0.934 0.920 0.918 0.907 Serine/threonine-protein kinase chk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3Z3]
87. C02F5.9 pbs-6 20120 7.456 0.904 0.932 0.942 0.932 0.930 0.955 0.945 0.916 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
88. T28D6.9 pen-2 2311 7.455 0.941 0.950 0.930 0.950 0.958 0.931 0.915 0.880 Gamma-secretase subunit pen-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U357]
89. ZK1248.10 tbc-2 5875 7.454 0.959 0.964 0.962 0.964 0.936 0.964 0.856 0.849 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_495156]
90. C09G4.3 cks-1 17852 7.454 0.965 0.952 0.971 0.952 0.928 0.915 0.874 0.897 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
91. DY3.2 lmn-1 22449 7.454 0.901 0.960 0.932 0.960 0.906 0.930 0.938 0.927 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
92. F12F6.5 srgp-1 9048 7.453 0.946 0.935 0.954 0.935 0.918 0.957 0.926 0.882 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
93. C29H12.1 rars-2 3803 7.453 0.900 0.919 0.950 0.919 0.949 0.980 0.883 0.953 arginyl(R) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_495227]
94. C07A9.3 tlk-1 12572 7.449 0.965 0.966 0.960 0.966 0.953 0.905 0.884 0.850 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
95. F49D11.9 tag-296 7973 7.449 0.945 0.962 0.952 0.962 0.886 0.926 0.912 0.904
96. Y54F10AM.4 ceh-44 5910 7.446 0.931 0.954 0.956 0.954 0.941 0.951 0.924 0.835 Homeobox protein cut-like ceh-44 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL02]
97. K07C5.8 cash-1 10523 7.445 0.931 0.952 0.933 0.952 0.953 0.971 0.905 0.848 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
98. C56C10.1 vps-33.2 2038 7.444 0.910 0.934 0.926 0.934 0.954 0.971 0.950 0.865 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495342]
99. F23C8.4 ubxn-1 25368 7.444 0.936 0.961 0.968 0.961 0.871 0.941 0.886 0.920 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
100. K08E3.6 cyk-4 8158 7.442 0.960 0.949 0.947 0.949 0.902 0.900 0.933 0.902 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]

There are 1519 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA