C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R13H8.1

Gene ID Gene Name Reads Transcripts Annotation
R13H8.1 daf-16 17736 R13H8.1a, R13H8.1b.1, R13H8.1b.2, R13H8.1c.1, R13H8.1c.2, R13H8.1d, R13H8.1e, R13H8.1f, R13H8.1g, R13H8.1h, R13H8.1i, R13H8.1k, R13H8.1l, R13H8.1m Forkhead box protein O [Source:UniProtKB/Swiss-Prot;Acc:O16850]

Genes with expression patterns similar to R13H8.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R13H8.1 daf-16 17736 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Forkhead box protein O [Source:UniProtKB/Swiss-Prot;Acc:O16850]
2. C47E12.5 uba-1 36184 7.535 0.965 0.951 0.947 0.951 0.929 0.965 0.900 0.927 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
3. C30C11.4 hsp-110 27892 7.474 0.939 0.936 0.945 0.936 0.949 0.954 0.879 0.936 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_498868]
4. M142.6 rle-1 11584 7.47 0.947 0.952 0.959 0.952 0.928 0.906 0.879 0.947 Regulation of longevity by E3 ubiquitin-protein ligase [Source:UniProtKB/Swiss-Prot;Acc:O45962]
5. T26A5.9 dlc-1 59038 7.437 0.952 0.957 0.956 0.957 0.930 0.936 0.801 0.948 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
6. M7.1 let-70 85699 7.427 0.955 0.954 0.958 0.954 0.936 0.956 0.777 0.937 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
7. C07G2.2 atf-7 17768 7.425 0.978 0.962 0.960 0.962 0.931 0.932 0.812 0.888 ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_497914]
8. ZK637.3 lnkn-1 16095 7.411 0.962 0.950 0.955 0.950 0.930 0.947 0.779 0.938 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
9. Y54G2A.2 atln-1 16823 7.403 0.965 0.928 0.963 0.928 0.928 0.944 0.852 0.895 ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
10. Y47D3A.16 rsks-1 16858 7.398 0.942 0.936 0.963 0.936 0.943 0.919 0.884 0.875 Ribosomal protein S6 kinase [Source:RefSeq peptide;Acc:NP_499447]
11. C36A4.9 acs-19 32578 7.389 0.900 0.957 0.955 0.957 0.958 0.959 0.922 0.781 Acetyl-coenzyme A synthetase [Source:RefSeq peptide;Acc:NP_001021206]
12. R05F9.10 sgt-1 35541 7.35 0.935 0.958 0.962 0.958 0.918 0.937 0.803 0.879 Small Glutamine-rich Tetratrico repeat protein [Source:RefSeq peptide;Acc:NP_494893]
13. F33D11.11 vpr-1 18001 7.349 0.978 0.955 0.951 0.955 0.891 0.962 0.731 0.926 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
14. F57B9.10 rpn-6.1 20218 7.345 0.961 0.943 0.956 0.943 0.937 0.881 0.774 0.950 Probable 26S proteasome regulatory subunit rpn-6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20938]
15. D2096.2 praf-3 18471 7.345 0.948 0.947 0.971 0.947 0.971 0.872 0.841 0.848 Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
16. T23H2.5 rab-10 31382 7.339 0.973 0.945 0.982 0.945 0.899 0.906 0.773 0.916 RAB family [Source:RefSeq peptide;Acc:NP_491857]
17. F26E4.1 sur-6 16191 7.333 0.984 0.957 0.942 0.957 0.882 0.927 0.771 0.913 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
18. Y104H12BR.1 plst-1 9556 7.327 0.971 0.945 0.962 0.945 0.909 0.954 0.732 0.909 PLaSTin (actin bundling protein) homolog [Source:RefSeq peptide;Acc:NP_001294438]
19. R07G3.1 cdc-42 35737 7.311 0.968 0.923 0.971 0.923 0.914 0.913 0.769 0.930 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
20. T05H10.5 ufd-2 30044 7.31 0.938 0.937 0.949 0.937 0.900 0.951 0.769 0.929 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
21. F46E10.9 dpy-11 16851 7.309 0.962 0.954 0.973 0.954 0.954 0.856 0.823 0.833 DumPY: shorter than wild-type [Source:RefSeq peptide;Acc:NP_504655]
22. Y48A6B.13 spat-2 21773 7.303 0.961 0.940 0.931 0.940 0.915 0.954 0.743 0.919 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
23. R05D11.3 ran-4 15494 7.3 0.962 0.966 0.960 0.966 0.852 0.949 0.750 0.895 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
24. Y43F4B.7 Y43F4B.7 2077 7.295 0.892 0.955 0.917 0.955 0.936 0.910 0.809 0.921
25. F01G10.1 tkt-1 37942 7.291 0.913 0.922 0.881 0.922 0.965 0.899 0.919 0.870 TransKeTolase homolog [Source:RefSeq peptide;Acc:NP_501878]
26. F40G9.3 ubc-20 16785 7.286 0.949 0.948 0.954 0.948 0.878 0.964 0.765 0.880 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
27. F08F8.3 kap-1 31437 7.285 0.946 0.920 0.949 0.920 0.892 0.953 0.764 0.941 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
28. ZK370.5 pdhk-2 9358 7.28 0.940 0.924 0.957 0.924 0.883 0.940 0.817 0.895 Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q02332]
29. Y57A10A.18 pqn-87 31844 7.279 0.950 0.926 0.968 0.926 0.897 0.955 0.695 0.962 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
30. Y79H2A.6 arx-3 17398 7.276 0.967 0.935 0.964 0.935 0.889 0.927 0.734 0.925 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
31. F53F10.4 unc-108 41213 7.275 0.946 0.956 0.962 0.956 0.923 0.880 0.824 0.828 Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
32. F57B9.2 let-711 8592 7.273 0.952 0.936 0.948 0.936 0.880 0.947 0.756 0.918 NTL-1a; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q20937]
33. F38H4.9 let-92 25368 7.272 0.963 0.930 0.964 0.930 0.896 0.943 0.739 0.907 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
34. H38K22.2 dcn-1 9678 7.272 0.931 0.939 0.958 0.939 0.910 0.928 0.757 0.910 Defective in cullin neddylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3C8]
35. C56C10.3 vps-32.1 24107 7.269 0.945 0.943 0.971 0.943 0.877 0.864 0.822 0.904 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
36. F25D1.1 ppm-1 16992 7.266 0.949 0.937 0.958 0.937 0.896 0.961 0.749 0.879 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
37. M01E5.4 M01E5.4 7638 7.264 0.951 0.955 0.965 0.955 0.890 0.952 0.816 0.780
38. C15H11.4 dhs-22 21674 7.264 0.954 0.935 0.959 0.935 0.894 0.931 0.749 0.907 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
39. H37A05.1 lpin-1 17623 7.264 0.862 0.905 0.935 0.905 0.951 0.936 0.866 0.904 LiPIN (mammalian lipodystrophy associated) homolog [Source:RefSeq peptide;Acc:NP_506380]
40. T23D8.1 mom-5 4550 7.259 0.963 0.948 0.945 0.948 0.942 0.919 0.842 0.752 More Of MS [Source:RefSeq peptide;Acc:NP_492635]
41. K10C3.6 nhr-49 10681 7.254 0.953 0.925 0.969 0.925 0.943 0.879 0.783 0.877 Nuclear hormone receptor family member nhr-49 [Source:UniProtKB/Swiss-Prot;Acc:O45666]
42. T12D8.6 mlc-5 19567 7.25 0.949 0.940 0.961 0.940 0.897 0.962 0.731 0.870 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
43. C09G12.9 tsg-101 9451 7.245 0.942 0.944 0.967 0.944 0.894 0.941 0.716 0.897 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
44. F43E2.7 mtch-1 30689 7.243 0.935 0.958 0.958 0.958 0.889 0.953 0.691 0.901 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
45. F36H1.2 kdin-1 6118 7.241 0.919 0.916 0.949 0.916 0.938 0.960 0.817 0.826 KiDINs220 (vertebrate scaffold protein) homolog [Source:RefSeq peptide;Acc:NP_001040942]
46. R12B2.5 mdt-15 19784 7.24 0.935 0.897 0.971 0.897 0.943 0.954 0.859 0.784 Mediator of RNA polymerase II transcription subunit 15 [Source:UniProtKB/Swiss-Prot;Acc:Q21955]
47. Y73B6BL.6 sqd-1 41708 7.236 0.919 0.931 0.951 0.931 0.891 0.961 0.729 0.923 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
48. Y46G5A.31 gsy-1 22792 7.235 0.950 0.948 0.945 0.948 0.956 0.830 0.842 0.816 Glycogen [starch] synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2D9]
49. C18D11.4 rsp-8 18308 7.232 0.958 0.957 0.954 0.957 0.885 0.944 0.708 0.869 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
50. C46C2.1 wnk-1 15184 7.232 0.951 0.946 0.956 0.946 0.878 0.938 0.676 0.941 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
51. R10E11.1 cbp-1 20447 7.23 0.946 0.922 0.964 0.922 0.911 0.935 0.792 0.838
52. Y54G2A.31 ubc-13 22367 7.229 0.938 0.921 0.962 0.921 0.906 0.923 0.765 0.893 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
53. F57B10.7 tre-1 12811 7.225 0.952 0.943 0.950 0.943 0.952 0.856 0.891 0.738 Trehalase [Source:RefSeq peptide;Acc:NP_491890]
54. C16C10.7 rnf-5 7067 7.225 0.947 0.940 0.963 0.940 0.866 0.908 0.768 0.893 RING finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09463]
55. C43G2.1 paqr-1 17585 7.224 0.932 0.944 0.972 0.944 0.860 0.930 0.762 0.880 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
56. ZK265.9 fitm-2 8255 7.223 0.881 0.922 0.967 0.922 0.924 0.937 0.802 0.868 FIT family protein fitm-2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CZ37]
57. F40F9.7 drap-1 10298 7.22 0.968 0.951 0.947 0.951 0.891 0.919 0.744 0.849 DRAP1 corepressor homolog [Source:RefSeq peptide;Acc:NP_001023907]
58. C35D10.16 arx-6 8242 7.22 0.930 0.926 0.961 0.926 0.895 0.927 0.729 0.926 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
59. C18A3.5 tiar-1 25400 7.22 0.972 0.952 0.967 0.952 0.873 0.910 0.685 0.909 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
60. F26G5.9 tam-1 11602 7.219 0.953 0.937 0.953 0.937 0.943 0.928 0.711 0.857 Tandem Array expression Modifier [Source:RefSeq peptide;Acc:NP_504335]
61. ZK970.4 vha-9 43596 7.218 0.917 0.908 0.889 0.908 0.956 0.885 0.872 0.883 Probable V-type proton ATPase subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q23680]
62. K05C4.1 pbs-5 17648 7.217 0.952 0.939 0.952 0.939 0.894 0.951 0.717 0.873 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
63. R144.4 wip-1 14168 7.216 0.958 0.927 0.966 0.927 0.904 0.958 0.699 0.877 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
64. Y65B4BR.4 wwp-1 23206 7.216 0.977 0.949 0.964 0.949 0.874 0.930 0.673 0.900 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
65. Y41C4A.4 crh-1 18112 7.215 0.965 0.925 0.961 0.925 0.932 0.899 0.807 0.801 CREB Homolog [Source:RefSeq peptide;Acc:NP_001022861]
66. C52E4.3 snr-4 19308 7.215 0.931 0.930 0.950 0.930 0.858 0.896 0.806 0.914 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
67. Y71G12B.15 ubc-3 9409 7.213 0.960 0.937 0.953 0.937 0.870 0.965 0.725 0.866 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001293441]
68. Y59A8B.22 snx-6 9350 7.211 0.964 0.911 0.960 0.911 0.920 0.872 0.828 0.845 Sorting NeXin [Source:RefSeq peptide;Acc:NP_001256763]
69. F10E7.8 farl-11 15974 7.21 0.948 0.890 0.967 0.890 0.929 0.942 0.784 0.860 FAR (Factor ARrest) Like [Source:RefSeq peptide;Acc:NP_495467]
70. Y57E12AM.1 Y57E12AM.1 10510 7.21 0.953 0.953 0.936 0.953 0.891 0.941 0.682 0.901 Transmembrane protein 258 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q965T1]
71. K08D12.1 pbs-1 21677 7.21 0.972 0.946 0.943 0.946 0.861 0.946 0.700 0.896 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
72. Y38A8.2 pbs-3 18117 7.209 0.950 0.921 0.964 0.921 0.865 0.944 0.731 0.913 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
73. W02F12.5 dlst-1 55841 7.207 0.927 0.909 0.875 0.909 0.924 0.951 0.785 0.927 DihydroLipoamide S-SuccinylTransferase [Source:RefSeq peptide;Acc:NP_504700]
74. D2023.2 pyc-1 45018 7.206 0.950 0.937 0.912 0.937 0.898 0.940 0.794 0.838 Pyruvate carboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17732]
75. F26E4.11 hrdl-1 14721 7.206 0.944 0.943 0.935 0.943 0.904 0.969 0.678 0.890 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
76. ZK1058.4 ccdc-47 8879 7.205 0.977 0.950 0.940 0.950 0.880 0.915 0.717 0.876 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
77. B0205.7 kin-3 29775 7.205 0.933 0.935 0.927 0.935 0.888 0.956 0.733 0.898 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
78. T24C4.6 zer-1 16051 7.202 0.952 0.939 0.943 0.939 0.865 0.935 0.712 0.917 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
79. Y102A5A.1 cand-1 11808 7.201 0.910 0.953 0.956 0.953 0.872 0.953 0.717 0.887 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
80. T05C12.7 cct-1 41264 7.196 0.957 0.939 0.947 0.939 0.895 0.926 0.659 0.934 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
81. D1014.3 snap-1 16776 7.194 0.972 0.951 0.966 0.951 0.847 0.951 0.660 0.896 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
82. R155.1 mboa-6 8023 7.194 0.918 0.936 0.947 0.936 0.955 0.815 0.834 0.853 Lysophospholipid acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:O01925]
83. C34E10.1 gop-3 11393 7.191 0.916 0.938 0.952 0.938 0.879 0.944 0.695 0.929 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
84. T24F1.1 raga-1 16171 7.19 0.940 0.933 0.956 0.933 0.909 0.904 0.731 0.884 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
85. R12E2.2 suco-1 10408 7.189 0.953 0.935 0.957 0.935 0.863 0.932 0.791 0.823 SUn (SUN) domain Containing Ossification factor homolog [Source:RefSeq peptide;Acc:NP_491321]
86. F36H9.3 dhs-13 21659 7.188 0.937 0.940 0.973 0.940 0.882 0.938 0.744 0.834 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_503501]
87. C47B2.4 pbs-2 19805 7.187 0.942 0.929 0.955 0.929 0.872 0.966 0.739 0.855 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
88. Y57G11C.12 nuo-3 34963 7.186 0.917 0.922 0.929 0.922 0.872 0.953 0.743 0.928 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_502790]
89. Y17G7B.18 Y17G7B.18 3107 7.183 0.950 0.927 0.962 0.927 0.917 0.936 0.688 0.876 Probable RNA methyltransferase Y17G7B.18 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2R0]
90. C39F7.4 rab-1 44088 7.183 0.955 0.944 0.968 0.944 0.861 0.907 0.692 0.912 RAB family [Source:RefSeq peptide;Acc:NP_503397]
91. F39B2.10 dnj-12 35162 7.183 0.947 0.952 0.956 0.952 0.864 0.935 0.662 0.915 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
92. Y111B2A.18 rsp-3 43731 7.182 0.981 0.965 0.956 0.965 0.865 0.901 0.659 0.890 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
93. F13G3.4 dylt-1 21345 7.181 0.927 0.943 0.954 0.943 0.872 0.935 0.731 0.876 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
94. T04D1.3 unc-57 12126 7.181 0.962 0.929 0.964 0.929 0.854 0.958 0.686 0.899 Endophilin [Source:UniProtKB/TrEMBL;Acc:Q6TM46]
95. F49E8.7 F49E8.7 2432 7.18 0.955 0.890 0.965 0.890 0.940 0.890 0.737 0.913
96. T07A5.2 unc-50 4604 7.18 0.935 0.945 0.960 0.945 0.867 0.941 0.708 0.879
97. Y38F1A.10 max-2 13482 7.177 0.942 0.869 0.962 0.869 0.882 0.965 0.850 0.838 Serine/threonine-protein kinase max-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EGQ3]
98. ZC518.3 ccr-4 15531 7.174 0.959 0.934 0.939 0.934 0.870 0.948 0.712 0.878 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
99. Y113G7B.23 swsn-1 13766 7.17 0.972 0.939 0.966 0.939 0.850 0.961 0.654 0.889 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
100. R05H10.2 rbm-28 12662 7.17 0.897 0.889 0.911 0.889 0.951 0.948 0.831 0.854 RNA Binding Motif protein homolog [Source:RefSeq peptide;Acc:NP_497077]

There are 1096 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA