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Results for R12B2.5

Gene ID Gene Name Reads Transcripts Annotation
R12B2.5 mdt-15 19784 R12B2.5a.1, R12B2.5a.2, R12B2.5a.3, R12B2.5b.1, R12B2.5b.2, R12B2.5b.3 Mediator of RNA polymerase II transcription subunit 15 [Source:UniProtKB/Swiss-Prot;Acc:Q21955]

Genes with expression patterns similar to R12B2.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R12B2.5 mdt-15 19784 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mediator of RNA polymerase II transcription subunit 15 [Source:UniProtKB/Swiss-Prot;Acc:Q21955]
2. R10E11.1 cbp-1 20447 7.549 0.960 0.966 0.964 0.966 0.942 0.942 0.898 0.911
3. B0041.2 ain-2 13092 7.534 0.951 0.967 0.958 0.967 0.961 0.946 0.901 0.883 ALG-1 INteracting protein [Source:RefSeq peptide;Acc:NP_001249682]
4. F47D12.4 hmg-1.2 13779 7.532 0.961 0.961 0.970 0.961 0.969 0.961 0.876 0.873 High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
5. H21P03.3 sms-1 7737 7.505 0.931 0.962 0.963 0.962 0.972 0.956 0.903 0.856 Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3D4]
6. R07G3.1 cdc-42 35737 7.504 0.967 0.973 0.977 0.973 0.953 0.948 0.856 0.857 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
7. Y79H2A.6 arx-3 17398 7.483 0.949 0.959 0.968 0.959 0.953 0.967 0.858 0.870 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
8. T26A5.9 dlc-1 59038 7.47 0.957 0.936 0.958 0.936 0.969 0.986 0.904 0.824 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
9. ZK637.3 lnkn-1 16095 7.464 0.956 0.963 0.952 0.963 0.948 0.974 0.892 0.816 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
10. F43C1.2 mpk-1 13166 7.462 0.964 0.952 0.960 0.952 0.944 0.956 0.905 0.829 Mitogen-activated protein kinase mpk-1 [Source:UniProtKB/Swiss-Prot;Acc:P39745]
11. K05C4.11 sol-2 16560 7.46 0.945 0.959 0.946 0.959 0.962 0.960 0.922 0.807 Suppressor Of Lurcher movement defect [Source:RefSeq peptide;Acc:NP_493560]
12. D2024.6 cap-1 13880 7.433 0.947 0.958 0.971 0.958 0.948 0.940 0.864 0.847 F-actin-capping protein subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P34685]
13. C07G2.2 atf-7 17768 7.428 0.967 0.951 0.958 0.951 0.945 0.913 0.899 0.844 ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_497914]
14. F36H1.2 kdin-1 6118 7.42 0.953 0.928 0.957 0.928 0.967 0.953 0.890 0.844 KiDINs220 (vertebrate scaffold protein) homolog [Source:RefSeq peptide;Acc:NP_001040942]
15. ZK792.6 let-60 16967 7.411 0.957 0.950 0.971 0.950 0.921 0.925 0.895 0.842 Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
16. F57B9.2 let-711 8592 7.407 0.954 0.934 0.945 0.934 0.942 0.893 0.934 0.871 NTL-1a; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q20937]
17. Y59A8B.22 snx-6 9350 7.407 0.959 0.968 0.971 0.968 0.878 0.952 0.874 0.837 Sorting NeXin [Source:RefSeq peptide;Acc:NP_001256763]
18. F08F8.3 kap-1 31437 7.406 0.968 0.961 0.949 0.961 0.932 0.956 0.877 0.802 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
19. Y71F9AL.16 arx-1 7692 7.405 0.966 0.955 0.965 0.955 0.916 0.938 0.850 0.860 Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I0]
20. H21P03.1 mbf-1 25586 7.396 0.935 0.960 0.940 0.960 0.965 0.945 0.874 0.817 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
21. K04G7.3 ogt-1 8245 7.395 0.932 0.957 0.955 0.957 0.917 0.943 0.912 0.822 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Source:UniProtKB/Swiss-Prot;Acc:O18158]
22. F53G12.1 rab-11.1 28814 7.395 0.923 0.944 0.948 0.944 0.962 0.940 0.880 0.854 RAB family [Source:RefSeq peptide;Acc:NP_490675]
23. Y41C4A.4 crh-1 18112 7.38 0.954 0.940 0.943 0.940 0.912 0.919 0.948 0.824 CREB Homolog [Source:RefSeq peptide;Acc:NP_001022861]
24. F56C9.11 F56C9.11 4388 7.379 0.928 0.954 0.947 0.954 0.917 0.948 0.827 0.904
25. F43E2.7 mtch-1 30689 7.372 0.952 0.955 0.963 0.955 0.923 0.951 0.846 0.827 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
26. C30C11.4 hsp-110 27892 7.367 0.957 0.947 0.953 0.947 0.958 0.922 0.883 0.800 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_498868]
27. F38A5.1 odr-8 5283 7.366 0.962 0.975 0.952 0.975 0.909 0.957 0.797 0.839 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
28. T24F1.1 raga-1 16171 7.363 0.955 0.965 0.949 0.965 0.927 0.958 0.820 0.824 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
29. K10C3.6 nhr-49 10681 7.361 0.930 0.960 0.957 0.960 0.924 0.959 0.791 0.880 Nuclear hormone receptor family member nhr-49 [Source:UniProtKB/Swiss-Prot;Acc:O45666]
30. Y42G9A.4 mvk-1 17922 7.353 0.937 0.952 0.928 0.952 0.924 0.941 0.899 0.820 MeValonate Kinase [Source:RefSeq peptide;Acc:NP_001022866]
31. C52E12.4 lst-6 5520 7.352 0.938 0.961 0.971 0.961 0.891 0.913 0.850 0.867 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_495437]
32. F26G5.9 tam-1 11602 7.351 0.937 0.955 0.959 0.955 0.937 0.932 0.902 0.774 Tandem Array expression Modifier [Source:RefSeq peptide;Acc:NP_504335]
33. F55C5.7 rskd-1 4814 7.351 0.945 0.953 0.923 0.953 0.840 0.963 0.836 0.938 Ribosomal protein S6 Kinase Delta homolog [Source:RefSeq peptide;Acc:NP_506082]
34. F57B9.10 rpn-6.1 20218 7.349 0.957 0.943 0.954 0.943 0.917 0.960 0.849 0.826 Probable 26S proteasome regulatory subunit rpn-6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20938]
35. T05H10.5 ufd-2 30044 7.348 0.956 0.954 0.958 0.954 0.939 0.945 0.829 0.813 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
36. Y57G11C.13 arl-8 26649 7.345 0.949 0.961 0.966 0.961 0.920 0.904 0.877 0.807 ARF-Like [Source:RefSeq peptide;Acc:NP_502791]
37. R08D7.6 pde-2 9491 7.343 0.915 0.966 0.955 0.966 0.938 0.939 0.831 0.833 Probable 3',5'-cyclic phosphodiesterase pde-2 [Source:UniProtKB/Swiss-Prot;Acc:P30645]
38. D1022.1 ubc-6 9722 7.343 0.956 0.963 0.953 0.963 0.936 0.950 0.806 0.816 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
39. Y54G2A.2 atln-1 16823 7.341 0.943 0.959 0.957 0.959 0.905 0.939 0.788 0.891 ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
40. T04A8.9 dnj-18 10313 7.338 0.953 0.966 0.974 0.966 0.889 0.953 0.838 0.799 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_497962]
41. R05D11.3 ran-4 15494 7.338 0.958 0.946 0.960 0.946 0.933 0.947 0.817 0.831 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
42. F08F8.2 hmgr-1 6483 7.333 0.938 0.957 0.942 0.957 0.911 0.951 0.800 0.877 3-hydroxy-3-methylglutaryl coenzyme A reductase [Source:RefSeq peptide;Acc:NP_498626]
43. T04D1.3 unc-57 12126 7.332 0.946 0.950 0.970 0.950 0.904 0.934 0.827 0.851 Endophilin [Source:UniProtKB/TrEMBL;Acc:Q6TM46]
44. C15H11.4 dhs-22 21674 7.331 0.971 0.956 0.971 0.956 0.946 0.931 0.831 0.769 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
45. F38H4.9 let-92 25368 7.328 0.976 0.964 0.969 0.964 0.932 0.915 0.796 0.812 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
46. E01A2.2 E01A2.2 12356 7.328 0.937 0.944 0.951 0.944 0.942 0.941 0.841 0.828 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
47. K07C5.1 arx-2 20142 7.326 0.965 0.964 0.952 0.964 0.932 0.949 0.790 0.810 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
48. F26H11.2 nurf-1 13015 7.323 0.953 0.954 0.956 0.954 0.921 0.931 0.836 0.818 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
49. C35D10.16 arx-6 8242 7.322 0.965 0.928 0.952 0.928 0.947 0.946 0.847 0.809 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
50. Y49A3A.1 cept-2 8916 7.322 0.949 0.952 0.957 0.952 0.906 0.941 0.872 0.793 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
51. R10E12.1 alx-1 10631 7.32 0.965 0.979 0.961 0.979 0.875 0.892 0.785 0.884 Apoptosis-linked gene 2-interacting protein X 1 [Source:UniProtKB/Swiss-Prot;Acc:P34552]
52. D2096.2 praf-3 18471 7.317 0.948 0.960 0.971 0.960 0.928 0.943 0.861 0.746 Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
53. C06H2.6 lmtr-3 11122 7.317 0.917 0.960 0.944 0.960 0.933 0.963 0.839 0.801 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
54. Y46G5A.31 gsy-1 22792 7.316 0.974 0.958 0.968 0.958 0.901 0.918 0.808 0.831 Glycogen [starch] synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2D9]
55. ZK1128.8 vps-29 5118 7.315 0.948 0.958 0.964 0.958 0.897 0.970 0.811 0.809 Vacuolar protein sorting-associated protein 29 [Source:RefSeq peptide;Acc:NP_001022987]
56. R07E5.10 pdcd-2 5211 7.314 0.935 0.958 0.946 0.958 0.890 0.966 0.827 0.834 Vacuolar ATPase assembly integral membrane protein VMA21 homolog [Source:UniProtKB/Swiss-Prot;Acc:A5JYQ9]
57. Y54G2A.31 ubc-13 22367 7.313 0.939 0.954 0.968 0.954 0.932 0.972 0.893 0.701 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
58. C01G6.5 C01G6.5 10996 7.313 0.876 0.968 0.954 0.968 0.925 0.931 0.832 0.859
59. Y54E10BL.6 mek-2 5042 7.312 0.948 0.908 0.944 0.908 0.933 0.955 0.879 0.837 Dual specificity mitogen-activated protein kinase kinase mek-2 [Source:UniProtKB/Swiss-Prot;Acc:Q10664]
60. Y73B6BL.6 sqd-1 41708 7.31 0.940 0.968 0.964 0.968 0.944 0.960 0.814 0.752 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
61. Y56A3A.20 ccf-1 18463 7.309 0.970 0.975 0.976 0.975 0.915 0.912 0.806 0.780 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
62. B0379.4 scpl-1 14783 7.307 0.942 0.971 0.947 0.971 0.907 0.900 0.811 0.858 SCP (Small C-terminal domain Phosphatase)-Like phosphatase [Source:RefSeq peptide;Acc:NP_740911]
63. C15F1.7 sod-1 36504 7.306 0.938 0.915 0.909 0.915 0.942 0.968 0.919 0.800 Superoxide dismutase [Cu-Zn] [Source:UniProtKB/Swiss-Prot;Acc:P34697]
64. C15H11.3 nxf-1 9528 7.305 0.961 0.935 0.943 0.935 0.871 0.967 0.887 0.806 Nuclear RNA export factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS7]
65. W07B3.2 gei-4 15206 7.304 0.934 0.950 0.965 0.950 0.888 0.950 0.869 0.798 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_497188]
66. T05C12.7 cct-1 41264 7.302 0.952 0.967 0.964 0.967 0.935 0.964 0.764 0.789 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
67. T09B4.10 chn-1 5327 7.301 0.945 0.958 0.950 0.958 0.890 0.943 0.820 0.837 C-term of Hsp70-iNteracting protein (CHIP family) [Source:RefSeq peptide;Acc:NP_491781]
68. F59G1.3 vps-35 9577 7.299 0.940 0.957 0.962 0.957 0.927 0.928 0.821 0.807 Vacuolar protein sorting-associated protein 35 [Source:RefSeq peptide;Acc:NP_495180]
69. F25D1.1 ppm-1 16992 7.297 0.965 0.966 0.960 0.966 0.937 0.891 0.781 0.831 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
70. H37A05.1 lpin-1 17623 7.293 0.899 0.930 0.923 0.930 0.931 0.953 0.845 0.882 LiPIN (mammalian lipodystrophy associated) homolog [Source:RefSeq peptide;Acc:NP_506380]
71. C53A5.3 hda-1 18413 7.289 0.953 0.964 0.963 0.964 0.914 0.954 0.824 0.753 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
72. M7.1 let-70 85699 7.289 0.928 0.942 0.955 0.942 0.954 0.954 0.836 0.778 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
73. C54G10.3 pmp-3 8899 7.288 0.950 0.964 0.977 0.964 0.948 0.921 0.767 0.797 Peroxisomal Membrane Protein related [Source:RefSeq peptide;Acc:NP_001256607]
74. M142.6 rle-1 11584 7.287 0.934 0.928 0.960 0.928 0.931 0.947 0.883 0.776 Regulation of longevity by E3 ubiquitin-protein ligase [Source:UniProtKB/Swiss-Prot;Acc:O45962]
75. Y6D11A.2 arx-4 3777 7.285 0.948 0.954 0.918 0.954 0.892 0.892 0.881 0.846 Probable actin-related protein 2/3 complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8WTM6]
76. Y53G8AR.3 ral-1 8736 7.283 0.953 0.929 0.920 0.929 0.913 0.919 0.869 0.851 RAL (Ras-related GTPase) homolog [Source:RefSeq peptide;Acc:NP_001254867]
77. F35G12.3 sel-5 5924 7.283 0.950 0.963 0.961 0.963 0.942 0.886 0.849 0.769 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_001022562]
78. M04B2.1 mep-1 14260 7.283 0.948 0.971 0.941 0.971 0.909 0.903 0.841 0.799 MOG interacting and ectopic P-granules protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21502]
79. F26F4.7 nhl-2 13541 7.277 0.937 0.966 0.952 0.966 0.930 0.878 0.878 0.770 NHL (ring finger b-box coiled coil) domain containing [Source:RefSeq peptide;Acc:NP_498026]
80. W06D4.5 snx-3 13450 7.276 0.972 0.950 0.962 0.950 0.887 0.918 0.863 0.774 Sorting NeXin [Source:RefSeq peptide;Acc:NP_492437]
81. C26E6.11 mmab-1 4385 7.275 0.950 0.975 0.967 0.975 0.903 0.921 0.791 0.793 MethylMalonic Aciduria type B homolog [Source:RefSeq peptide;Acc:NP_498038]
82. C46C2.1 wnk-1 15184 7.275 0.927 0.964 0.960 0.964 0.913 0.918 0.805 0.824 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
83. F54F2.8 prx-19 15821 7.275 0.949 0.968 0.968 0.968 0.893 0.883 0.758 0.888 Putative peroxisomal biogenesis factor 19 [Source:UniProtKB/Swiss-Prot;Acc:P34453]
84. T26E3.3 par-6 8650 7.274 0.945 0.963 0.960 0.963 0.890 0.930 0.831 0.792 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
85. C18A3.5 tiar-1 25400 7.273 0.938 0.946 0.957 0.946 0.932 0.924 0.813 0.817 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
86. F55A12.3 ppk-1 8598 7.273 0.958 0.982 0.970 0.982 0.851 0.930 0.761 0.839 PIP Kinase [Source:RefSeq peptide;Acc:NP_491576]
87. Y106G6A.5 dsbn-1 7130 7.27 0.933 0.974 0.949 0.974 0.910 0.941 0.853 0.736 Dysbindin protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XWQ1]
88. F49E8.7 F49E8.7 2432 7.269 0.926 0.945 0.976 0.945 0.935 0.958 0.759 0.825
89. B0285.1 cdk-12 5900 7.268 0.974 0.943 0.964 0.943 0.903 0.938 0.777 0.826 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
90. F33D11.11 vpr-1 18001 7.267 0.928 0.959 0.950 0.959 0.938 0.911 0.778 0.844 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
91. C47E12.5 uba-1 36184 7.267 0.953 0.952 0.947 0.952 0.926 0.907 0.820 0.810 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
92. C09G12.9 tsg-101 9451 7.267 0.969 0.942 0.961 0.942 0.950 0.906 0.789 0.808 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
93. F10F2.1 sel-2 8706 7.266 0.952 0.944 0.962 0.944 0.920 0.897 0.839 0.808 Putative neurobeachin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19317]
94. Y57A10A.18 pqn-87 31844 7.265 0.931 0.969 0.971 0.969 0.894 0.924 0.798 0.809 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
95. Y48A6B.13 spat-2 21773 7.262 0.948 0.951 0.929 0.951 0.933 0.957 0.821 0.772 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
96. R07B7.3 pqn-53 10459 7.261 0.965 0.953 0.951 0.953 0.900 0.959 0.818 0.762 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
97. F01F1.4 rabn-5 5269 7.258 0.935 0.967 0.906 0.967 0.930 0.904 0.782 0.867 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
98. F09E5.2 algn-2 2694 7.258 0.952 0.941 0.972 0.941 0.924 0.880 0.782 0.866 Asparagine Linked Glycosylation (ALG) homolog, Nematode [Source:RefSeq peptide;Acc:NP_495010]
99. F57F5.5 pkc-1 13592 7.258 0.934 0.952 0.962 0.952 0.948 0.856 0.820 0.834 Protein kinase C-like 1B [Source:UniProtKB/Swiss-Prot;Acc:P34885]
100. C16C10.7 rnf-5 7067 7.254 0.959 0.949 0.970 0.949 0.904 0.904 0.777 0.842 RING finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09463]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA