C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C56C10.3

Gene ID Gene Name Reads Transcripts Annotation
C56C10.3 vps-32.1 24107 C56C10.3.1, C56C10.3.2 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]

Genes with expression patterns similar to C56C10.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C56C10.3 vps-32.1 24107 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
2. Y65B4BR.4 wwp-1 23206 7.675 0.971 0.986 0.984 0.986 0.949 0.958 0.892 0.949 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
3. K02B2.3 mcu-1 20448 7.662 0.982 0.977 0.971 0.977 0.974 0.974 0.865 0.942 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
4. R10E12.1 alx-1 10631 7.634 0.973 0.970 0.966 0.970 0.952 0.934 0.930 0.939 Apoptosis-linked gene 2-interacting protein X 1 [Source:UniProtKB/Swiss-Prot;Acc:P34552]
5. F38H4.9 let-92 25368 7.626 0.982 0.977 0.972 0.977 0.958 0.907 0.903 0.950 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
6. C47E12.5 uba-1 36184 7.618 0.973 0.976 0.978 0.976 0.968 0.905 0.924 0.918 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
7. F48E8.5 paa-1 39773 7.613 0.951 0.972 0.974 0.972 0.966 0.937 0.904 0.937 Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]
8. C43G2.1 paqr-1 17585 7.608 0.982 0.961 0.984 0.961 0.958 0.953 0.903 0.906 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
9. C30C11.2 rpn-3 14437 7.608 0.978 0.973 0.976 0.973 0.962 0.962 0.915 0.869 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
10. F09G2.8 F09G2.8 2899 7.597 0.983 0.975 0.985 0.975 0.953 0.958 0.846 0.922 Probable phospholipase D F09G2.8 [Source:UniProtKB/Swiss-Prot;Acc:O17405]
11. K10C8.3 istr-1 14718 7.597 0.954 0.976 0.968 0.976 0.959 0.971 0.888 0.905 Increased Sodium Tolerance Related [Source:RefSeq peptide;Acc:NP_506170]
12. B0464.5 spk-1 35112 7.596 0.965 0.981 0.979 0.981 0.968 0.928 0.880 0.914 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
13. Y17G7B.18 Y17G7B.18 3107 7.592 0.966 0.944 0.986 0.944 0.980 0.970 0.876 0.926 Probable RNA methyltransferase Y17G7B.18 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2R0]
14. F29F11.6 gsp-1 27907 7.592 0.973 0.980 0.960 0.980 0.959 0.913 0.876 0.951 Serine/threonine-protein phosphatase PP1-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q27497]
15. D1014.3 snap-1 16776 7.589 0.961 0.985 0.987 0.985 0.927 0.906 0.861 0.977 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
16. D1037.4 rab-8 14097 7.583 0.964 0.978 0.985 0.978 0.949 0.974 0.853 0.902 RAB family [Source:RefSeq peptide;Acc:NP_491199]
17. K02F3.10 moma-1 12723 7.582 0.951 0.938 0.951 0.938 0.957 0.966 0.924 0.957
18. R05F9.10 sgt-1 35541 7.582 0.965 0.979 0.970 0.979 0.948 0.928 0.903 0.910 Small Glutamine-rich Tetratrico repeat protein [Source:RefSeq peptide;Acc:NP_494893]
19. M7.1 let-70 85699 7.581 0.976 0.976 0.975 0.976 0.947 0.879 0.912 0.940 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
20. B0286.4 ntl-2 14207 7.58 0.966 0.965 0.975 0.965 0.942 0.939 0.886 0.942 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
21. F59A6.6 rnh-1.0 8629 7.573 0.968 0.962 0.977 0.962 0.939 0.975 0.859 0.931 RNase H [Source:RefSeq peptide;Acc:NP_001040787]
22. T20G5.1 chc-1 32620 7.569 0.982 0.976 0.977 0.976 0.936 0.951 0.857 0.914 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
23. F36H9.3 dhs-13 21659 7.567 0.979 0.973 0.968 0.973 0.955 0.952 0.895 0.872 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_503501]
24. F37C12.7 acs-4 25192 7.566 0.961 0.985 0.977 0.985 0.944 0.943 0.812 0.959 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_498568]
25. F46A9.5 skr-1 31598 7.559 0.952 0.955 0.931 0.955 0.971 0.897 0.930 0.968 Skp1-related protein [Source:UniProtKB/Swiss-Prot;Acc:G5ECU1]
26. K04G2.11 scbp-2 9123 7.555 0.981 0.972 0.964 0.972 0.960 0.970 0.843 0.893 SECIS (SeCis) Binding Protein homolog, partial [Source:RefSeq peptide;Acc:NP_492214]
27. B0495.8 B0495.8 2064 7.55 0.919 0.972 0.955 0.972 0.948 0.956 0.901 0.927
28. W08G11.4 pptr-1 18411 7.544 0.955 0.962 0.923 0.962 0.966 0.947 0.891 0.938 Protein Phosphatase 2A (Two A) Regulatory subunit [Source:RefSeq peptide;Acc:NP_507133]
29. Y71H2B.10 apb-1 10457 7.543 0.966 0.976 0.976 0.976 0.949 0.953 0.806 0.941 AP complex subunit beta [Source:RefSeq peptide;Acc:NP_001022937]
30. F25D7.2 tag-353 21026 7.541 0.973 0.974 0.985 0.974 0.969 0.892 0.850 0.924
31. F21F3.7 F21F3.7 4924 7.537 0.965 0.921 0.971 0.921 0.971 0.966 0.912 0.910
32. T24C4.6 zer-1 16051 7.535 0.926 0.971 0.967 0.971 0.942 0.923 0.879 0.956 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
33. F52E1.13 lmd-3 25047 7.532 0.971 0.987 0.981 0.987 0.952 0.973 0.836 0.845 LysM Domain (peptidoglycan binding) protein [Source:RefSeq peptide;Acc:NP_872149]
34. F25B5.4 ubq-1 19910 7.531 0.946 0.967 0.920 0.967 0.954 0.987 0.862 0.928 Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71]
35. Y106G6E.6 csnk-1 11517 7.529 0.949 0.978 0.968 0.978 0.930 0.948 0.831 0.947 Casein kinase I gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8WQ99]
36. F40F12.5 cyld-1 10757 7.528 0.949 0.984 0.981 0.984 0.951 0.939 0.881 0.859 CYLinDromatosis (human disease gene) homolog [Source:RefSeq peptide;Acc:NP_001255045]
37. F15C11.2 ubql-1 22588 7.523 0.963 0.962 0.964 0.962 0.954 0.869 0.927 0.922 UBiQuiLin [Source:RefSeq peptide;Acc:NP_740884]
38. T20F5.2 pbs-4 8985 7.52 0.974 0.979 0.983 0.979 0.929 0.943 0.849 0.884 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
39. T23H2.5 rab-10 31382 7.519 0.978 0.976 0.982 0.976 0.967 0.881 0.832 0.927 RAB family [Source:RefSeq peptide;Acc:NP_491857]
40. F40G9.3 ubc-20 16785 7.517 0.966 0.982 0.964 0.982 0.966 0.901 0.894 0.862 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
41. R12E2.3 rpn-8 11194 7.516 0.976 0.973 0.974 0.973 0.963 0.964 0.836 0.857 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
42. C03C10.1 kin-19 53180 7.515 0.954 0.965 0.958 0.965 0.969 0.945 0.867 0.892 Casein kinase I isoform alpha [Source:UniProtKB/Swiss-Prot;Acc:P42168]
43. Y54G2A.2 atln-1 16823 7.514 0.955 0.957 0.975 0.957 0.951 0.860 0.915 0.944 ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
44. F49C12.8 rpn-7 15688 7.514 0.981 0.984 0.974 0.984 0.956 0.979 0.823 0.833 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
45. ZK370.5 pdhk-2 9358 7.513 0.968 0.973 0.972 0.973 0.933 0.947 0.833 0.914 Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q02332]
46. R02F2.4 R02F2.4 2756 7.512 0.965 0.961 0.983 0.961 0.920 0.884 0.916 0.922
47. W10D5.3 gei-17 8809 7.51 0.946 0.979 0.969 0.979 0.952 0.940 0.831 0.914 E3 SUMO-protein ligase gei-17 [Source:UniProtKB/Swiss-Prot;Acc:Q94361]
48. W04C9.4 W04C9.4 7142 7.507 0.973 0.924 0.950 0.924 0.962 0.960 0.852 0.962
49. R166.5 mnk-1 28617 7.507 0.969 0.973 0.950 0.973 0.941 0.978 0.869 0.854 MAP kinase iNtegrating Kinase (MNK) homolog [Source:RefSeq peptide;Acc:NP_496272]
50. Y57G11C.12 nuo-3 34963 7.505 0.955 0.954 0.925 0.954 0.949 0.909 0.907 0.952 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_502790]
51. ZK180.4 sar-1 27456 7.504 0.980 0.976 0.965 0.976 0.977 0.909 0.845 0.876 GTP-binding protein SAR1 [Source:UniProtKB/Swiss-Prot;Acc:Q23445]
52. C39F7.4 rab-1 44088 7.504 0.969 0.978 0.965 0.978 0.951 0.870 0.850 0.943 RAB family [Source:RefSeq peptide;Acc:NP_503397]
53. Y119D3B.15 dss-1 19116 7.503 0.972 0.980 0.961 0.980 0.950 0.936 0.852 0.872 Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
54. F56H1.7 oxy-5 12425 7.503 0.953 0.942 0.961 0.942 0.962 0.964 0.869 0.910
55. T16H12.5 bath-43 10021 7.503 0.947 0.964 0.964 0.964 0.929 0.961 0.838 0.936 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
56. T03F1.8 guk-1 9333 7.5 0.969 0.981 0.980 0.981 0.904 0.935 0.814 0.936 GUanylate Kinase [Source:RefSeq peptide;Acc:NP_491243]
57. F39H11.5 pbs-7 13631 7.498 0.986 0.991 0.981 0.991 0.933 0.889 0.862 0.865 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
58. C02F5.9 pbs-6 20120 7.496 0.963 0.992 0.983 0.992 0.950 0.934 0.833 0.849 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
59. T12D8.6 mlc-5 19567 7.488 0.980 0.974 0.981 0.974 0.944 0.863 0.873 0.899 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
60. C36E8.5 tbb-2 19603 7.482 0.947 0.963 0.952 0.963 0.963 0.970 0.869 0.855 Tubulin beta-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P52275]
61. C06A1.1 cdc-48.1 52743 7.478 0.981 0.977 0.979 0.977 0.949 0.964 0.811 0.840 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
62. M117.2 par-5 64868 7.476 0.965 0.962 0.944 0.962 0.964 0.902 0.873 0.904 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
63. M110.4 ifg-1 25579 7.476 0.937 0.962 0.944 0.962 0.960 0.936 0.841 0.934 Initiation Factor 4G (eIF4G) family [Source:RefSeq peptide;Acc:NP_001129819]
64. F10G7.8 rpn-5 16014 7.476 0.965 0.981 0.974 0.981 0.956 0.967 0.833 0.819 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
65. R07G3.1 cdc-42 35737 7.472 0.981 0.980 0.983 0.980 0.946 0.818 0.846 0.938 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
66. ZK20.3 rad-23 35070 7.47 0.988 0.971 0.983 0.971 0.944 0.890 0.840 0.883
67. H38K22.2 dcn-1 9678 7.467 0.946 0.961 0.971 0.961 0.942 0.916 0.902 0.868 Defective in cullin neddylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3C8]
68. ZK637.8 unc-32 13714 7.467 0.974 0.973 0.972 0.973 0.943 0.908 0.843 0.881 Probable V-type proton ATPase 116 kDa subunit a [Source:UniProtKB/Swiss-Prot;Acc:P30628]
69. F58G11.2 rde-12 6935 7.467 0.967 0.966 0.983 0.966 0.925 0.951 0.816 0.893 DEAD-box ATP-dependent RNA helicase rde-12 [Source:UniProtKB/Swiss-Prot;Acc:P90897]
70. K08D12.1 pbs-1 21677 7.464 0.984 0.986 0.984 0.986 0.933 0.883 0.831 0.877 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
71. Y67D8C.5 eel-1 30623 7.464 0.944 0.976 0.966 0.976 0.940 0.916 0.861 0.885 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
72. T23F11.1 ppm-2 10411 7.462 0.949 0.966 0.908 0.966 0.947 0.960 0.869 0.897 Probable protein phosphatase 2C T23F11.1 [Source:UniProtKB/Swiss-Prot;Acc:P49596]
73. F36A2.9 F36A2.9 9829 7.461 0.888 0.979 0.791 0.979 0.972 0.949 0.925 0.978
74. T21E12.4 dhc-1 20370 7.46 0.970 0.984 0.979 0.984 0.923 0.928 0.811 0.881 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
75. ZK287.5 rbx-1 13546 7.46 0.966 0.981 0.971 0.981 0.917 0.937 0.837 0.870 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
76. F20D6.4 srp-7 7446 7.458 0.966 0.945 0.975 0.945 0.911 0.931 0.867 0.918 SeRPin [Source:RefSeq peptide;Acc:NP_001023822]
77. Y62E10A.10 emc-3 8138 7.456 0.974 0.972 0.969 0.972 0.896 0.904 0.834 0.935 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_502575]
78. K05C4.1 pbs-5 17648 7.455 0.983 0.989 0.973 0.989 0.924 0.897 0.792 0.908 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
79. F26E4.1 sur-6 16191 7.455 0.935 0.981 0.959 0.981 0.946 0.864 0.883 0.906 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
80. F40F9.1 xbx-6 23586 7.454 0.961 0.972 0.974 0.972 0.916 0.954 0.832 0.873 X-BoX promoter element regulated [Source:RefSeq peptide;Acc:NP_741597]
81. ZK637.5 asna-1 6017 7.451 0.935 0.936 0.957 0.936 0.935 0.950 0.876 0.926 ATPase asna-1 [Source:UniProtKB/Swiss-Prot;Acc:P30632]
82. Y71F9AL.17 copa-1 20285 7.449 0.969 0.974 0.957 0.974 0.903 0.933 0.803 0.936 Coatomer subunit alpha [Source:RefSeq peptide;Acc:NP_491069]
83. Y32F6A.3 pap-1 11972 7.448 0.959 0.987 0.991 0.987 0.914 0.927 0.809 0.874 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
84. C16C10.7 rnf-5 7067 7.447 0.956 0.967 0.965 0.967 0.920 0.895 0.855 0.922 RING finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09463]
85. F29G9.5 rpt-2 18618 7.445 0.979 0.981 0.973 0.981 0.952 0.964 0.805 0.810 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
86. F25D1.1 ppm-1 16992 7.445 0.956 0.981 0.984 0.981 0.934 0.856 0.844 0.909 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
87. Y57G11C.10 gdi-1 38397 7.445 0.969 0.977 0.963 0.977 0.961 0.812 0.898 0.888 GDI (RabGDP Dissociation Inhibitor) family [Source:RefSeq peptide;Acc:NP_001041043]
88. Y51H4A.3 rho-1 32656 7.438 0.938 0.915 0.921 0.915 0.964 0.892 0.927 0.966 Ras-like GTP-binding protein rhoA [Source:UniProtKB/Swiss-Prot;Acc:Q22038]
89. F53F10.4 unc-108 41213 7.438 0.982 0.972 0.956 0.972 0.940 0.843 0.867 0.906 Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
90. F39B2.2 uev-1 13597 7.434 0.965 0.982 0.977 0.982 0.907 0.891 0.847 0.883 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
91. T05H10.5 ufd-2 30044 7.434 0.977 0.968 0.957 0.968 0.902 0.852 0.871 0.939 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
92. F23F1.8 rpt-4 14303 7.43 0.978 0.984 0.977 0.984 0.953 0.934 0.811 0.809 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
93. C33A12.3 C33A12.3 8034 7.427 0.947 0.972 0.888 0.972 0.929 0.923 0.852 0.944
94. ZC518.2 sec-24.2 13037 7.426 0.960 0.978 0.969 0.978 0.913 0.932 0.777 0.919 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
95. F27D4.4 F27D4.4 19502 7.424 0.893 0.969 0.842 0.969 0.950 0.977 0.896 0.928 Zinc finger CCCH domain-containing protein 15 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93618]
96. T27A3.2 usp-5 11388 7.42 0.984 0.979 0.975 0.979 0.934 0.956 0.806 0.807 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
97. Y38A8.2 pbs-3 18117 7.42 0.982 0.985 0.987 0.985 0.913 0.856 0.839 0.873 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
98. Y110A7A.14 pas-3 6831 7.42 0.977 0.981 0.961 0.981 0.928 0.902 0.829 0.861 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
99. C18E9.10 sftd-3 4611 7.419 0.967 0.975 0.955 0.975 0.961 0.952 0.751 0.883 SFT2 Domain containing protein 3 homolog [Source:RefSeq peptide;Acc:NP_495905]
100. Y97E10AL.3 Y97E10AL.3 3022 7.416 0.961 0.973 0.966 0.973 0.942 0.960 0.834 0.807

There are 3243 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA