C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R12E2.2

Gene ID Gene Name Reads Transcripts Annotation
R12E2.2 suco-1 10408 R12E2.2 SUn (SUN) domain Containing Ossification factor homolog [Source:RefSeq peptide;Acc:NP_491321]

Genes with expression patterns similar to R12E2.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R12E2.2 suco-1 10408 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SUn (SUN) domain Containing Ossification factor homolog [Source:RefSeq peptide;Acc:NP_491321]
2. C47E12.5 uba-1 36184 7.513 0.982 0.987 0.982 0.987 0.885 0.957 0.855 0.878 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
3. ZK20.3 rad-23 35070 7.372 0.960 0.979 0.976 0.979 0.818 0.974 0.848 0.838
4. C30C11.2 rpn-3 14437 7.371 0.961 0.960 0.979 0.960 0.803 0.966 0.858 0.884 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
5. Y46G5A.17 cpt-1 14412 7.359 0.953 0.972 0.966 0.972 0.850 0.953 0.862 0.831 Carnitine Palmitoyl Transferase [Source:RefSeq peptide;Acc:NP_496721]
6. D1014.3 snap-1 16776 7.353 0.983 0.979 0.991 0.979 0.753 0.941 0.830 0.897 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
7. Y65B4BR.4 wwp-1 23206 7.344 0.966 0.967 0.969 0.967 0.797 0.971 0.796 0.911 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
8. F25D7.2 tag-353 21026 7.344 0.967 0.973 0.981 0.973 0.814 0.914 0.839 0.883
9. T24C4.6 zer-1 16051 7.342 0.966 0.962 0.984 0.962 0.788 0.956 0.833 0.891 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
10. Y104H12BR.1 plst-1 9556 7.339 0.977 0.965 0.961 0.965 0.821 0.931 0.828 0.891 PLaSTin (actin bundling protein) homolog [Source:RefSeq peptide;Acc:NP_001294438]
11. C43G2.1 paqr-1 17585 7.331 0.963 0.957 0.977 0.957 0.800 0.982 0.817 0.878 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
12. ZK370.5 pdhk-2 9358 7.33 0.972 0.969 0.962 0.969 0.805 0.975 0.824 0.854 Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q02332]
13. R05F9.10 sgt-1 35541 7.319 0.925 0.963 0.950 0.963 0.861 0.927 0.880 0.850 Small Glutamine-rich Tetratrico repeat protein [Source:RefSeq peptide;Acc:NP_494893]
14. T20G5.1 chc-1 32620 7.318 0.979 0.977 0.957 0.977 0.782 0.960 0.817 0.869 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
15. C06A1.1 cdc-48.1 52743 7.309 0.961 0.970 0.987 0.970 0.766 0.978 0.855 0.822 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
16. C56C10.3 vps-32.1 24107 7.308 0.957 0.966 0.985 0.966 0.829 0.925 0.790 0.890 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
17. K08D12.1 pbs-1 21677 7.299 0.961 0.983 0.983 0.983 0.780 0.969 0.800 0.840 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
18. R12E2.3 rpn-8 11194 7.297 0.961 0.971 0.969 0.971 0.798 0.970 0.802 0.855 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
19. F25D1.1 ppm-1 16992 7.283 0.959 0.976 0.974 0.976 0.792 0.953 0.801 0.852 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
20. K02F2.1 dpf-3 11465 7.283 0.977 0.985 0.992 0.985 0.752 0.935 0.753 0.904 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
21. F48E8.5 paa-1 39773 7.282 0.945 0.980 0.978 0.980 0.804 0.942 0.786 0.867 Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]
22. T23D8.1 mom-5 4550 7.28 0.982 0.964 0.968 0.964 0.827 0.911 0.912 0.752 More Of MS [Source:RefSeq peptide;Acc:NP_492635]
23. K07A1.8 ile-1 16218 7.279 0.977 0.976 0.974 0.976 0.741 0.968 0.808 0.859 Intracellular LEctin [Source:RefSeq peptide;Acc:NP_492548]
24. F25B5.4 ubq-1 19910 7.278 0.993 0.972 0.942 0.972 0.792 0.938 0.790 0.879 Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71]
25. Y38F1A.10 max-2 13482 7.277 0.938 0.935 0.971 0.935 0.937 0.930 0.881 0.750 Serine/threonine-protein kinase max-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EGQ3]
26. C02F5.9 pbs-6 20120 7.27 0.936 0.963 0.981 0.963 0.786 0.988 0.817 0.836 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
27. F32B6.8 tbc-3 9252 7.265 0.966 0.968 0.976 0.968 0.754 0.968 0.782 0.883 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
28. D1022.7 aka-1 10681 7.261 0.980 0.976 0.985 0.976 0.756 0.960 0.748 0.880 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
29. Y71H2B.10 apb-1 10457 7.261 0.951 0.961 0.965 0.961 0.761 0.964 0.833 0.865 AP complex subunit beta [Source:RefSeq peptide;Acc:NP_001022937]
30. ZC395.3 toc-1 6437 7.256 0.969 0.971 0.983 0.971 0.777 0.930 0.824 0.831 similar to Transporter Of divalent Cations [Source:RefSeq peptide;Acc:NP_001033385]
31. Y46G5A.12 vps-2 5685 7.254 0.966 0.973 0.961 0.973 0.779 0.984 0.790 0.828 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
32. Y54G2A.2 atln-1 16823 7.252 0.974 0.972 0.962 0.972 0.861 0.892 0.799 0.820 ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
33. C36A4.9 acs-19 32578 7.25 0.942 0.924 0.966 0.924 0.899 0.913 0.854 0.828 Acetyl-coenzyme A synthetase [Source:RefSeq peptide;Acc:NP_001021206]
34. F23F1.8 rpt-4 14303 7.25 0.943 0.969 0.986 0.969 0.777 0.990 0.818 0.798 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
35. F58G11.1 letm-1 13414 7.249 0.968 0.970 0.970 0.970 0.757 0.966 0.780 0.868 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
36. F39H11.5 pbs-7 13631 7.246 0.956 0.964 0.983 0.964 0.754 0.969 0.804 0.852 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
37. F40G9.3 ubc-20 16785 7.246 0.921 0.970 0.949 0.970 0.800 0.966 0.832 0.838 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
38. F21F3.7 F21F3.7 4924 7.244 0.987 0.944 0.977 0.944 0.800 0.919 0.806 0.867
39. F49E8.3 pam-1 25149 7.239 0.965 0.937 0.982 0.937 0.783 0.974 0.810 0.851
40. K02B2.3 mcu-1 20448 7.239 0.978 0.974 0.963 0.974 0.774 0.955 0.756 0.865 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
41. ZC262.3 iglr-2 6268 7.239 0.956 0.942 0.978 0.942 0.770 0.980 0.855 0.816 Immunoglobulin domain and leucine-rich repeat-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34595]
42. K10B2.1 lin-23 15896 7.238 0.985 0.960 0.979 0.960 0.762 0.973 0.778 0.841 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
43. F23C8.4 ubxn-1 25368 7.238 0.970 0.957 0.965 0.957 0.776 0.978 0.819 0.816 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
44. B0286.4 ntl-2 14207 7.236 0.962 0.978 0.967 0.978 0.789 0.932 0.792 0.838 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
45. CD4.6 pas-6 18332 7.235 0.971 0.972 0.967 0.972 0.794 0.960 0.808 0.791 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
46. F49E11.1 mbk-2 30367 7.235 0.953 0.963 0.963 0.963 0.794 0.964 0.771 0.864 Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTF3]
47. T20F5.2 pbs-4 8985 7.234 0.938 0.969 0.987 0.969 0.755 0.986 0.809 0.821 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
48. T06D8.8 rpn-9 11282 7.233 0.973 0.963 0.981 0.963 0.769 0.972 0.769 0.843 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
49. ZK287.5 rbx-1 13546 7.232 0.975 0.975 0.979 0.975 0.744 0.980 0.793 0.811 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
50. F40F12.5 cyld-1 10757 7.232 0.981 0.971 0.978 0.971 0.783 0.954 0.746 0.848 CYLinDromatosis (human disease gene) homolog [Source:RefSeq peptide;Acc:NP_001255045]
51. T12D8.6 mlc-5 19567 7.229 0.963 0.971 0.964 0.971 0.798 0.943 0.795 0.824 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
52. F42G9.5 alh-11 5722 7.226 0.966 0.975 0.982 0.975 0.741 0.951 0.788 0.848 ALdehyde deHydrogenase [Source:RefSeq peptide;Acc:NP_741082]
53. F26E4.11 hrdl-1 14721 7.225 0.978 0.970 0.977 0.970 0.762 0.937 0.770 0.861 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
54. Y82E9BR.16 Y82E9BR.16 2822 7.224 0.924 0.942 0.930 0.942 0.835 0.959 0.800 0.892
55. Y32F6A.3 pap-1 11972 7.223 0.980 0.975 0.980 0.975 0.721 0.968 0.795 0.829 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
56. F26E4.1 sur-6 16191 7.22 0.965 0.970 0.974 0.970 0.783 0.925 0.781 0.852 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
57. F33D11.11 vpr-1 18001 7.217 0.962 0.966 0.958 0.966 0.792 0.942 0.808 0.823 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
58. W03G9.4 app-1 5935 7.217 0.971 0.967 0.964 0.967 0.818 0.906 0.864 0.760 AminoPeptidase P [Source:RefSeq peptide;Acc:NP_491489]
59. C10C6.6 catp-8 8079 7.217 0.968 0.961 0.973 0.961 0.765 0.959 0.785 0.845 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
60. T23H2.5 rab-10 31382 7.212 0.960 0.968 0.981 0.968 0.827 0.849 0.803 0.856 RAB family [Source:RefSeq peptide;Acc:NP_491857]
61. B0495.8 B0495.8 2064 7.211 0.883 0.954 0.928 0.954 0.806 0.963 0.852 0.871
62. R01B10.5 jamp-1 10072 7.211 0.946 0.964 0.982 0.964 0.776 0.947 0.805 0.827 JAMP (JNK1-Associated Membrane Protein) homolog [Source:RefSeq peptide;Acc:NP_504568]
63. F38H4.9 let-92 25368 7.21 0.951 0.969 0.946 0.969 0.799 0.919 0.786 0.871 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
64. D1037.4 rab-8 14097 7.208 0.975 0.981 0.987 0.981 0.733 0.963 0.734 0.854 RAB family [Source:RefSeq peptide;Acc:NP_491199]
65. M7.1 let-70 85699 7.206 0.948 0.971 0.964 0.971 0.809 0.902 0.777 0.864 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
66. Y105E8A.9 apg-1 9675 7.206 0.954 0.977 0.960 0.977 0.761 0.934 0.804 0.839 AdaPtin, Gamma chain (clathrin associated complex) [Source:RefSeq peptide;Acc:NP_740937]
67. ZK858.1 gld-4 14162 7.201 0.983 0.972 0.978 0.972 0.745 0.935 0.739 0.877 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
68. ZK858.7 ZK858.7 2817 7.199 0.969 0.971 0.973 0.971 0.728 0.978 0.757 0.852
69. R07G3.1 cdc-42 35737 7.199 0.972 0.976 0.974 0.976 0.816 0.834 0.783 0.868 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
70. F10G7.8 rpn-5 16014 7.194 0.952 0.972 0.981 0.972 0.785 0.971 0.803 0.758 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
71. F20D6.4 srp-7 7446 7.193 0.945 0.946 0.972 0.946 0.941 0.855 0.759 0.829 SeRPin [Source:RefSeq peptide;Acc:NP_001023822]
72. B0464.5 spk-1 35112 7.191 0.945 0.957 0.954 0.957 0.769 0.955 0.757 0.897 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
73. F49D11.9 tag-296 7973 7.191 0.968 0.973 0.988 0.973 0.734 0.961 0.766 0.828
74. Y17G7B.18 Y17G7B.18 3107 7.19 0.957 0.941 0.980 0.941 0.828 0.949 0.758 0.836 Probable RNA methyltransferase Y17G7B.18 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2R0]
75. W09D10.4 W09D10.4 7486 7.189 0.962 0.921 0.956 0.921 0.760 0.978 0.824 0.867
76. R13H8.1 daf-16 17736 7.189 0.953 0.935 0.957 0.935 0.863 0.932 0.791 0.823 Forkhead box protein O [Source:UniProtKB/Swiss-Prot;Acc:O16850]
77. C07A9.3 tlk-1 12572 7.187 0.983 0.961 0.976 0.961 0.724 0.949 0.733 0.900 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
78. F25H2.8 ubc-25 12368 7.187 0.975 0.954 0.983 0.954 0.722 0.991 0.773 0.835 Ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q93571]
79. Y38A8.2 pbs-3 18117 7.185 0.958 0.967 0.989 0.967 0.771 0.944 0.794 0.795 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
80. C41C4.8 cdc-48.2 7843 7.185 0.979 0.973 0.979 0.973 0.764 0.963 0.779 0.775 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
81. F58G11.2 rde-12 6935 7.185 0.982 0.956 0.976 0.956 0.763 0.963 0.745 0.844 DEAD-box ATP-dependent RNA helicase rde-12 [Source:UniProtKB/Swiss-Prot;Acc:P90897]
82. F12F6.6 sec-24.1 10754 7.184 0.948 0.951 0.963 0.951 0.772 0.941 0.806 0.852 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502178]
83. F29G9.5 rpt-2 18618 7.181 0.940 0.970 0.973 0.970 0.767 0.968 0.798 0.795 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
84. F36F2.4 syx-7 3556 7.179 0.912 0.959 0.968 0.959 0.766 0.946 0.828 0.841 SYntaXin [Source:RefSeq peptide;Acc:NP_492422]
85. K05C4.1 pbs-5 17648 7.179 0.948 0.963 0.967 0.963 0.793 0.953 0.758 0.834 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
86. ZK652.3 ufm-1 12647 7.175 0.974 0.970 0.948 0.970 0.743 0.942 0.796 0.832 Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
87. R01H2.6 ubc-18 13394 7.174 0.957 0.982 0.968 0.982 0.758 0.957 0.767 0.803 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
88. C52E4.4 rpt-1 16724 7.173 0.938 0.971 0.964 0.971 0.751 0.971 0.801 0.806 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
89. Y106G6E.6 csnk-1 11517 7.172 0.953 0.967 0.963 0.967 0.753 0.937 0.777 0.855 Casein kinase I gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8WQ99]
90. T27A3.2 usp-5 11388 7.17 0.972 0.974 0.976 0.974 0.747 0.979 0.816 0.732 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
91. F37C12.7 acs-4 25192 7.168 0.962 0.963 0.964 0.963 0.766 0.942 0.770 0.838 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_498568]
92. K10C8.3 istr-1 14718 7.168 0.957 0.968 0.967 0.968 0.788 0.926 0.776 0.818 Increased Sodium Tolerance Related [Source:RefSeq peptide;Acc:NP_506170]
93. F55B12.3 sel-10 10304 7.164 0.962 0.975 0.967 0.975 0.751 0.986 0.756 0.792 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
94. C17H12.1 dyci-1 9858 7.163 0.954 0.969 0.971 0.969 0.760 0.964 0.757 0.819 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
95. F29C12.3 rict-1 5292 7.16 0.964 0.948 0.975 0.948 0.767 0.971 0.742 0.845
96. T05B11.3 clic-1 19766 7.16 0.981 0.980 0.985 0.980 0.799 0.868 0.705 0.862 Clathrin LIght Chain [Source:RefSeq peptide;Acc:NP_504999]
97. Y59A8A.3 tcc-1 20646 7.16 0.976 0.966 0.982 0.966 0.770 0.962 0.706 0.832 Transmembrane and Coiled-Coil protein [Source:RefSeq peptide;Acc:NP_507506]
98. C17D12.1 dhhc-7 6002 7.16 0.972 0.948 0.969 0.948 0.779 0.959 0.785 0.800 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_492960]
99. F49C12.8 rpn-7 15688 7.159 0.940 0.967 0.977 0.967 0.753 0.953 0.775 0.827 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
100. B0361.10 ykt-6 8571 7.159 0.946 0.966 0.965 0.966 0.755 0.968 0.797 0.796 YKT6 (yeast v-SNARE) homolog [Source:RefSeq peptide;Acc:NP_498605]

There are 2693 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA