C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y41C4A.4

Gene ID Gene Name Reads Transcripts Annotation
Y41C4A.4 crh-1 18112 Y41C4A.4a, Y41C4A.4b, Y41C4A.4c, Y41C4A.4d, Y41C4A.4e, Y41C4A.4f, Y41C4A.4g CREB Homolog [Source:RefSeq peptide;Acc:NP_001022861]

Genes with expression patterns similar to Y41C4A.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y41C4A.4 crh-1 18112 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CREB Homolog [Source:RefSeq peptide;Acc:NP_001022861]
2. ZK792.6 let-60 16967 7.514 0.942 0.959 0.967 0.959 0.905 0.945 0.920 0.917 Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
3. T26A5.9 dlc-1 59038 7.473 0.963 0.971 0.967 0.971 0.918 0.910 0.923 0.850 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
4. B0041.2 ain-2 13092 7.45 0.960 0.952 0.974 0.952 0.927 0.906 0.888 0.891 ALG-1 INteracting protein [Source:RefSeq peptide;Acc:NP_001249682]
5. F43C1.2 mpk-1 13166 7.419 0.972 0.944 0.958 0.944 0.909 0.895 0.912 0.885 Mitogen-activated protein kinase mpk-1 [Source:UniProtKB/Swiss-Prot;Acc:P39745]
6. R10E11.1 cbp-1 20447 7.411 0.961 0.949 0.968 0.949 0.907 0.921 0.879 0.877
7. Y47D3A.6 tra-1 10698 7.403 0.909 0.944 0.958 0.944 0.950 0.938 0.866 0.894 Sex-determining transformer protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34708]
8. C07G2.2 atf-7 17768 7.398 0.974 0.968 0.973 0.968 0.869 0.853 0.893 0.900 ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_497914]
9. K04G7.3 ogt-1 8245 7.395 0.952 0.954 0.953 0.954 0.862 0.899 0.921 0.900 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Source:UniProtKB/Swiss-Prot;Acc:O18158]
10. Y57G11C.13 arl-8 26649 7.395 0.944 0.948 0.963 0.948 0.914 0.882 0.899 0.897 ARF-Like [Source:RefSeq peptide;Acc:NP_502791]
11. W07B3.2 gei-4 15206 7.392 0.963 0.950 0.967 0.950 0.894 0.899 0.856 0.913 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_497188]
12. F56C9.11 F56C9.11 4388 7.392 0.938 0.951 0.949 0.951 0.917 0.918 0.868 0.900
13. T24A11.1 mtm-3 18086 7.384 0.943 0.964 0.965 0.964 0.926 0.904 0.859 0.859 Myotubularin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q22712]
14. R12B2.5 mdt-15 19784 7.38 0.954 0.940 0.943 0.940 0.912 0.919 0.948 0.824 Mediator of RNA polymerase II transcription subunit 15 [Source:UniProtKB/Swiss-Prot;Acc:Q21955]
15. R08D7.6 pde-2 9491 7.379 0.945 0.949 0.970 0.949 0.879 0.890 0.892 0.905 Probable 3',5'-cyclic phosphodiesterase pde-2 [Source:UniProtKB/Swiss-Prot;Acc:P30645]
16. B0379.4 scpl-1 14783 7.378 0.915 0.946 0.949 0.946 0.952 0.936 0.860 0.874 SCP (Small C-terminal domain Phosphatase)-Like phosphatase [Source:RefSeq peptide;Acc:NP_740911]
17. H38K22.3 tag-131 9318 7.369 0.943 0.943 0.968 0.943 0.944 0.875 0.856 0.897 Neuferricin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXA7]
18. T09A12.4 nhr-66 4746 7.361 0.943 0.958 0.966 0.958 0.843 0.901 0.898 0.894 Nuclear Hormone Receptor family [Source:RefSeq peptide;Acc:NP_001294133]
19. F26G5.9 tam-1 11602 7.359 0.955 0.947 0.970 0.947 0.913 0.897 0.898 0.832 Tandem Array expression Modifier [Source:RefSeq peptide;Acc:NP_504335]
20. H21P03.3 sms-1 7737 7.357 0.955 0.942 0.948 0.942 0.911 0.860 0.899 0.900 Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3D4]
21. R07G3.1 cdc-42 35737 7.347 0.969 0.954 0.968 0.954 0.896 0.897 0.847 0.862 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
22. F57B9.10 rpn-6.1 20218 7.343 0.971 0.956 0.965 0.956 0.904 0.896 0.865 0.830 Probable 26S proteasome regulatory subunit rpn-6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20938]
23. D2024.6 cap-1 13880 7.342 0.941 0.942 0.954 0.942 0.895 0.882 0.898 0.888 F-actin-capping protein subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P34685]
24. T04A8.9 dnj-18 10313 7.341 0.951 0.924 0.956 0.924 0.895 0.874 0.885 0.932 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_497962]
25. F47D12.4 hmg-1.2 13779 7.339 0.954 0.944 0.960 0.944 0.916 0.888 0.889 0.844 High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
26. F54F2.2 zfp-1 14753 7.337 0.942 0.928 0.935 0.928 0.903 0.950 0.862 0.889 Uncharacterized protein F54F2.2, isoform a [Source:UniProtKB/Swiss-Prot;Acc:P34447]
27. T23H2.5 rab-10 31382 7.337 0.968 0.961 0.973 0.961 0.909 0.925 0.802 0.838 RAB family [Source:RefSeq peptide;Acc:NP_491857]
28. F26H9.6 rab-5 23942 7.33 0.948 0.945 0.969 0.945 0.947 0.827 0.842 0.907 RAB family [Source:RefSeq peptide;Acc:NP_492481]
29. Y79H2A.6 arx-3 17398 7.328 0.954 0.958 0.964 0.958 0.881 0.912 0.874 0.827 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
30. K04G7.1 K04G7.1 3045 7.326 0.938 0.936 0.950 0.936 0.890 0.870 0.889 0.917
31. C35D10.16 arx-6 8242 7.319 0.948 0.922 0.981 0.922 0.895 0.910 0.884 0.857 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
32. F49E8.7 F49E8.7 2432 7.318 0.947 0.939 0.956 0.939 0.945 0.937 0.806 0.849
33. F57B10.7 tre-1 12811 7.318 0.957 0.938 0.958 0.938 0.911 0.877 0.783 0.956 Trehalase [Source:RefSeq peptide;Acc:NP_491890]
34. M7.1 let-70 85699 7.315 0.963 0.968 0.972 0.968 0.935 0.906 0.866 0.737 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
35. W03F11.6 afd-1 8609 7.314 0.917 0.958 0.955 0.958 0.943 0.832 0.856 0.895 AFaDin (actin filament binding protein) homolog [Source:RefSeq peptide;Acc:NP_001021660]
36. K02A11.1 gfi-2 8382 7.312 0.941 0.933 0.950 0.933 0.897 0.862 0.908 0.888 GEI-4 (Four) Interacting protein [Source:RefSeq peptide;Acc:NP_492587]
37. F46E10.9 dpy-11 16851 7.307 0.967 0.963 0.973 0.963 0.930 0.887 0.822 0.802 DumPY: shorter than wild-type [Source:RefSeq peptide;Acc:NP_504655]
38. ZK637.3 lnkn-1 16095 7.302 0.953 0.943 0.952 0.943 0.911 0.902 0.916 0.782 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
39. Y57G11C.10 gdi-1 38397 7.298 0.963 0.969 0.947 0.969 0.921 0.856 0.785 0.888 GDI (RabGDP Dissociation Inhibitor) family [Source:RefSeq peptide;Acc:NP_001041043]
40. C54G10.3 pmp-3 8899 7.291 0.955 0.945 0.939 0.945 0.927 0.891 0.828 0.861 Peroxisomal Membrane Protein related [Source:RefSeq peptide;Acc:NP_001256607]
41. Y49A3A.1 cept-2 8916 7.291 0.947 0.945 0.981 0.945 0.863 0.880 0.891 0.839 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
42. T03F1.3 pgk-1 25964 7.281 0.954 0.934 0.937 0.934 0.908 0.924 0.824 0.866 Probable phosphoglycerate kinase [Source:UniProtKB/Swiss-Prot;Acc:P91427]
43. C46C2.1 wnk-1 15184 7.281 0.946 0.957 0.964 0.957 0.880 0.879 0.813 0.885 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
44. D2096.2 praf-3 18471 7.28 0.948 0.951 0.977 0.951 0.912 0.850 0.865 0.826 Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
45. C27B7.8 rap-1 11965 7.28 0.959 0.941 0.961 0.941 0.888 0.866 0.851 0.873 Ras-related protein Rap-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18246]
46. C01G6.5 C01G6.5 10996 7.277 0.924 0.966 0.946 0.966 0.896 0.893 0.836 0.850
47. Y71F9AL.16 arx-1 7692 7.275 0.962 0.968 0.950 0.968 0.878 0.842 0.858 0.849 Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I0]
48. F36H1.2 kdin-1 6118 7.274 0.954 0.945 0.928 0.945 0.888 0.856 0.893 0.865 KiDINs220 (vertebrate scaffold protein) homolog [Source:RefSeq peptide;Acc:NP_001040942]
49. Y57A10A.18 pqn-87 31844 7.268 0.961 0.948 0.959 0.948 0.895 0.892 0.822 0.843 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
50. F40F9.7 drap-1 10298 7.268 0.961 0.933 0.940 0.933 0.849 0.906 0.894 0.852 DRAP1 corepressor homolog [Source:RefSeq peptide;Acc:NP_001023907]
51. D2030.9 wdr-23 12287 7.266 0.925 0.957 0.945 0.957 0.892 0.928 0.817 0.845 DDB1- and CUL4-associated factor 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90794]
52. F57F5.5 pkc-1 13592 7.266 0.956 0.970 0.971 0.970 0.899 0.865 0.792 0.843 Protein kinase C-like 1B [Source:UniProtKB/Swiss-Prot;Acc:P34885]
53. K07C5.1 arx-2 20142 7.263 0.957 0.946 0.978 0.946 0.914 0.889 0.850 0.783 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
54. Y59A8B.22 snx-6 9350 7.257 0.960 0.949 0.958 0.949 0.910 0.850 0.886 0.795 Sorting NeXin [Source:RefSeq peptide;Acc:NP_001256763]
55. Y54G2A.31 ubc-13 22367 7.257 0.934 0.948 0.957 0.948 0.889 0.866 0.911 0.804 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
56. Y54G2A.2 atln-1 16823 7.256 0.962 0.961 0.969 0.961 0.909 0.882 0.780 0.832 ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
57. T05H10.5 ufd-2 30044 7.255 0.954 0.941 0.947 0.941 0.898 0.905 0.863 0.806 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
58. Y46G5A.31 gsy-1 22792 7.254 0.957 0.949 0.924 0.949 0.919 0.887 0.805 0.864 Glycogen [starch] synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2D9]
59. Y37A1B.2 lst-4 11343 7.252 0.948 0.950 0.960 0.950 0.839 0.900 0.849 0.856 Sorting nexin lst-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4E2]
60. Y92C3B.3 rab-18 12556 7.246 0.960 0.951 0.981 0.951 0.899 0.868 0.842 0.794 Ras-related protein Rab-18 [Source:UniProtKB/Swiss-Prot;Acc:Q8MXS1]
61. ZC376.7 atfs-1 7905 7.242 0.935 0.935 0.959 0.935 0.889 0.879 0.883 0.827 Activating Transcription Factor associated with Stress [Source:RefSeq peptide;Acc:NP_506515]
62. C56C10.3 vps-32.1 24107 7.239 0.957 0.955 0.971 0.955 0.899 0.807 0.868 0.827 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
63. F57B10.3 ipgm-1 32965 7.236 0.951 0.914 0.927 0.914 0.890 0.907 0.855 0.878 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Source:UniProtKB/Swiss-Prot;Acc:G5EFZ1]
64. H38K22.2 dcn-1 9678 7.236 0.937 0.948 0.956 0.948 0.934 0.896 0.864 0.753 Defective in cullin neddylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3C8]
65. Y45G5AM.2 Y45G5AM.2 1267 7.233 0.964 0.924 0.975 0.924 0.912 0.862 0.877 0.795
66. T24F1.1 raga-1 16171 7.228 0.952 0.960 0.978 0.960 0.894 0.834 0.840 0.810 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
67. Y54E5B.4 ubc-16 8386 7.227 0.962 0.935 0.948 0.935 0.872 0.834 0.895 0.846 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
68. Y71G12B.15 ubc-3 9409 7.226 0.944 0.953 0.954 0.953 0.840 0.912 0.821 0.849 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001293441]
69. F53F10.4 unc-108 41213 7.226 0.952 0.959 0.946 0.959 0.893 0.896 0.777 0.844 Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
70. Y48G9A.8 ppk-2 8863 7.223 0.959 0.951 0.952 0.951 0.891 0.892 0.836 0.791 PIP Kinase [Source:RefSeq peptide;Acc:NP_497500]
71. M110.3 M110.3 3352 7.223 0.945 0.926 0.964 0.926 0.915 0.857 0.831 0.859
72. Y49E10.6 his-72 32293 7.219 0.953 0.957 0.967 0.957 0.873 0.865 0.881 0.766 Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
73. F43E2.7 mtch-1 30689 7.216 0.956 0.955 0.948 0.955 0.849 0.892 0.851 0.810 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
74. R13H8.1 daf-16 17736 7.215 0.965 0.925 0.961 0.925 0.932 0.899 0.807 0.801 Forkhead box protein O [Source:UniProtKB/Swiss-Prot;Acc:O16850]
75. F40F12.5 cyld-1 10757 7.209 0.955 0.962 0.968 0.962 0.916 0.849 0.827 0.770 CYLinDromatosis (human disease gene) homolog [Source:RefSeq peptide;Acc:NP_001255045]
76. F25D1.1 ppm-1 16992 7.209 0.946 0.951 0.970 0.951 0.887 0.815 0.805 0.884 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
77. F08F8.3 kap-1 31437 7.209 0.948 0.950 0.960 0.950 0.863 0.874 0.887 0.777 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
78. C06H2.6 lmtr-3 11122 7.208 0.941 0.963 0.980 0.963 0.883 0.878 0.845 0.755 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
79. Y59A8B.1 dpy-21 8126 7.207 0.907 0.962 0.952 0.962 0.871 0.854 0.798 0.901 DumPY: shorter than wild-type [Source:RefSeq peptide;Acc:NP_001024266]
80. Y73B6A.5 lin-45 10864 7.206 0.945 0.956 0.951 0.956 0.865 0.838 0.879 0.816 Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
81. R02F2.4 R02F2.4 2756 7.206 0.953 0.942 0.965 0.942 0.900 0.920 0.825 0.759
82. M01E5.4 M01E5.4 7638 7.206 0.928 0.955 0.976 0.955 0.891 0.862 0.884 0.755
83. R08C7.2 chat-1 11092 7.203 0.967 0.930 0.923 0.930 0.944 0.934 0.729 0.846 CHAperonin of TAT-1 [Source:RefSeq peptide;Acc:NP_001023332]
84. C47E12.5 uba-1 36184 7.203 0.968 0.969 0.978 0.969 0.904 0.839 0.824 0.752 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
85. W03C9.3 rab-7 10600 7.202 0.959 0.908 0.945 0.908 0.925 0.834 0.855 0.868 RAB family [Source:RefSeq peptide;Acc:NP_496549]
86. F55A12.3 ppk-1 8598 7.201 0.960 0.937 0.961 0.937 0.837 0.891 0.808 0.870 PIP Kinase [Source:RefSeq peptide;Acc:NP_491576]
87. K11D9.2 sca-1 71133 7.192 0.962 0.950 0.916 0.950 0.880 0.891 0.775 0.868 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
88. F10F2.1 sel-2 8706 7.19 0.956 0.943 0.944 0.943 0.859 0.826 0.848 0.871 Putative neurobeachin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19317]
89. C04D8.1 pac-1 11331 7.188 0.914 0.943 0.977 0.943 0.856 0.896 0.778 0.881 GTPase-activating protein pac-1 [Source:UniProtKB/Swiss-Prot;Acc:P34288]
90. C35B1.1 ubc-1 13805 7.188 0.911 0.914 0.953 0.914 0.909 0.906 0.833 0.848 Ubiquitin-conjugating enzyme E2 1 [Source:UniProtKB/Swiss-Prot;Acc:P52478]
91. C53A5.3 hda-1 18413 7.187 0.966 0.955 0.961 0.955 0.876 0.873 0.873 0.728 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
92. ZK593.6 lgg-2 19780 7.185 0.935 0.952 0.936 0.952 0.909 0.886 0.772 0.843
93. K10C3.6 nhr-49 10681 7.181 0.940 0.918 0.961 0.918 0.920 0.916 0.802 0.806 Nuclear hormone receptor family member nhr-49 [Source:UniProtKB/Swiss-Prot;Acc:O45666]
94. K02B2.1 pfkb-1.2 8303 7.179 0.935 0.960 0.974 0.960 0.861 0.830 0.808 0.851 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 6-phosphofructo-2-kinase Fructose-2,6-bisphosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q21122]
95. Y17G7B.18 Y17G7B.18 3107 7.179 0.952 0.924 0.959 0.924 0.925 0.865 0.762 0.868 Probable RNA methyltransferase Y17G7B.18 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2R0]
96. Y48A6B.13 spat-2 21773 7.178 0.963 0.955 0.955 0.955 0.900 0.865 0.815 0.770 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
97. W09G10.4 apd-3 6967 7.174 0.946 0.959 0.955 0.959 0.823 0.876 0.835 0.821 AP-3 complex subunit delta [Source:RefSeq peptide;Acc:NP_494570]
98. T24C4.6 zer-1 16051 7.172 0.957 0.957 0.960 0.957 0.875 0.863 0.773 0.830 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
99. F54F2.8 prx-19 15821 7.17 0.965 0.951 0.955 0.951 0.847 0.871 0.793 0.837 Putative peroxisomal biogenesis factor 19 [Source:UniProtKB/Swiss-Prot;Acc:P34453]
100. Y111B2A.11 epc-1 8915 7.17 0.924 0.956 0.957 0.956 0.884 0.817 0.831 0.845 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]

There are 1596 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA