C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F53F10.4

Gene ID Gene Name Reads Transcripts Annotation
F53F10.4 unc-108 41213 F53F10.4 Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]

Genes with expression patterns similar to F53F10.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F53F10.4 unc-108 41213 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
2. Y57G11C.10 gdi-1 38397 7.705 0.975 0.983 0.965 0.983 0.962 0.974 0.918 0.945 GDI (RabGDP Dissociation Inhibitor) family [Source:RefSeq peptide;Acc:NP_001041043]
3. F55A8.2 egl-4 28504 7.61 0.963 0.961 0.963 0.961 0.975 0.981 0.915 0.891 cGMP-dependent protein kinase egl-4 [Source:UniProtKB/Swiss-Prot;Acc:O76360]
4. F57B10.3 ipgm-1 32965 7.605 0.963 0.945 0.980 0.945 0.973 0.964 0.919 0.916 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Source:UniProtKB/Swiss-Prot;Acc:G5EFZ1]
5. F46A9.5 skr-1 31598 7.56 0.958 0.973 0.971 0.973 0.943 0.976 0.827 0.939 Skp1-related protein [Source:UniProtKB/Swiss-Prot;Acc:G5ECU1]
6. T03F1.3 pgk-1 25964 7.558 0.947 0.971 0.960 0.971 0.951 0.974 0.874 0.910 Probable phosphoglycerate kinase [Source:UniProtKB/Swiss-Prot;Acc:P91427]
7. ZK637.8 unc-32 13714 7.548 0.976 0.985 0.970 0.985 0.933 0.937 0.822 0.940 Probable V-type proton ATPase 116 kDa subunit a [Source:UniProtKB/Swiss-Prot;Acc:P30628]
8. F33A8.3 cey-1 94306 7.543 0.971 0.942 0.939 0.942 0.952 0.966 0.874 0.957 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
9. T23F11.1 ppm-2 10411 7.534 0.950 0.976 0.946 0.976 0.935 0.908 0.908 0.935 Probable protein phosphatase 2C T23F11.1 [Source:UniProtKB/Swiss-Prot;Acc:P49596]
10. ZK970.4 vha-9 43596 7.532 0.955 0.919 0.930 0.919 0.977 0.983 0.930 0.919 Probable V-type proton ATPase subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q23680]
11. K11D9.2 sca-1 71133 7.511 0.973 0.971 0.972 0.971 0.930 0.915 0.872 0.907 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
12. F15C11.2 ubql-1 22588 7.51 0.980 0.975 0.965 0.975 0.944 0.941 0.814 0.916 UBiQuiLin [Source:RefSeq peptide;Acc:NP_740884]
13. Y54G2A.2 atln-1 16823 7.499 0.961 0.963 0.955 0.963 0.954 0.956 0.870 0.877 ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
14. T23H2.5 rab-10 31382 7.481 0.972 0.975 0.974 0.975 0.948 0.965 0.768 0.904 RAB family [Source:RefSeq peptide;Acc:NP_491857]
15. T05H4.13 alh-4 60430 7.47 0.938 0.931 0.916 0.931 0.952 0.961 0.901 0.940 Aldehyde dehydrogenase [Source:RefSeq peptide;Acc:NP_741553]
16. ZK593.6 lgg-2 19780 7.461 0.919 0.950 0.939 0.950 0.959 0.959 0.880 0.905
17. T02G5.13 mmaa-1 14498 7.44 0.973 0.946 0.965 0.946 0.950 0.934 0.859 0.867 Methylmalonic aciduria type A homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22111]
18. C56C10.3 vps-32.1 24107 7.438 0.982 0.972 0.956 0.972 0.940 0.843 0.867 0.906 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
19. C39F7.4 rab-1 44088 7.435 0.989 0.983 0.969 0.983 0.918 0.950 0.764 0.879 RAB family [Source:RefSeq peptide;Acc:NP_503397]
20. ZK484.3 ZK484.3 9359 7.413 0.918 0.952 0.794 0.952 0.960 0.966 0.934 0.937
21. F01G10.1 tkt-1 37942 7.409 0.965 0.913 0.909 0.913 0.967 0.975 0.898 0.869 TransKeTolase homolog [Source:RefSeq peptide;Acc:NP_501878]
22. C06A8.1 mthf-1 33610 7.406 0.941 0.948 0.920 0.948 0.960 0.971 0.823 0.895 Probable methylenetetrahydrofolate reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17693]
23. ZK180.4 sar-1 27456 7.401 0.987 0.974 0.972 0.974 0.917 0.949 0.751 0.877 GTP-binding protein SAR1 [Source:UniProtKB/Swiss-Prot;Acc:Q23445]
24. D2023.2 pyc-1 45018 7.397 0.951 0.931 0.926 0.931 0.971 0.959 0.878 0.850 Pyruvate carboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17732]
25. Y46G5A.31 gsy-1 22792 7.384 0.979 0.975 0.967 0.975 0.902 0.915 0.789 0.882 Glycogen [starch] synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2D9]
26. R10E12.1 alx-1 10631 7.38 0.968 0.960 0.953 0.960 0.929 0.939 0.858 0.813 Apoptosis-linked gene 2-interacting protein X 1 [Source:UniProtKB/Swiss-Prot;Acc:P34552]
27. R04F11.3 R04F11.3 10000 7.379 0.917 0.963 0.840 0.963 0.953 0.939 0.848 0.956
28. R02F2.4 R02F2.4 2756 7.378 0.950 0.958 0.958 0.958 0.954 0.920 0.829 0.851
29. F55H2.2 vha-14 37918 7.374 0.912 0.906 0.889 0.906 0.956 0.980 0.915 0.910 V-type proton ATPase subunit D [Source:UniProtKB/Swiss-Prot;Acc:P34462]
30. R01B10.1 cpi-2 10083 7.372 0.928 0.919 0.911 0.919 0.963 0.945 0.862 0.925 Cysteine Protease Inhibitor [Source:RefSeq peptide;Acc:NP_504565]
31. K11H3.1 gpdh-2 10414 7.363 0.969 0.971 0.941 0.971 0.904 0.972 0.722 0.913 Probable glycerol-3-phosphate dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:P34517]
32. F43G9.1 idha-1 35495 7.362 0.958 0.928 0.918 0.928 0.933 0.932 0.841 0.924 Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93714]
33. C47E12.5 uba-1 36184 7.36 0.961 0.974 0.949 0.974 0.960 0.880 0.886 0.776 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
34. R166.5 mnk-1 28617 7.359 0.977 0.969 0.962 0.969 0.899 0.911 0.851 0.821 MAP kinase iNtegrating Kinase (MNK) homolog [Source:RefSeq peptide;Acc:NP_496272]
35. M106.5 cap-2 11395 7.353 0.969 0.980 0.947 0.980 0.834 0.938 0.805 0.900 F-actin-capping protein subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P34686]
36. F33A8.5 sdhd-1 35107 7.352 0.973 0.932 0.918 0.932 0.954 0.935 0.793 0.915 Putative succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O62215]
37. Y17G7B.7 tpi-1 19678 7.35 0.936 0.934 0.852 0.934 0.893 0.964 0.900 0.937 Triosephosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q10657]
38. F36A2.9 F36A2.9 9829 7.348 0.928 0.976 0.817 0.976 0.959 0.936 0.822 0.934
39. F26H9.6 rab-5 23942 7.347 0.953 0.966 0.955 0.966 0.895 0.909 0.837 0.866 RAB family [Source:RefSeq peptide;Acc:NP_492481]
40. F52F12.7 strl-1 8451 7.346 0.941 0.952 0.939 0.952 0.920 0.966 0.809 0.867 Steroidogenic acute regulatory-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O17883]
41. T04C12.5 act-2 157046 7.345 0.950 0.911 0.945 0.911 0.929 0.933 0.828 0.938 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
42. Y24D9A.1 ell-1 22458 7.344 0.934 0.952 0.963 0.952 0.905 0.916 0.803 0.919 ELL transcription elongation factor homolog [Source:RefSeq peptide;Acc:NP_741374]
43. F27D4.4 F27D4.4 19502 7.344 0.936 0.961 0.914 0.961 0.926 0.896 0.833 0.917 Zinc finger CCCH domain-containing protein 15 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93618]
44. B0041.2 ain-2 13092 7.341 0.965 0.969 0.957 0.969 0.894 0.936 0.809 0.842 ALG-1 INteracting protein [Source:RefSeq peptide;Acc:NP_001249682]
45. T03D3.5 T03D3.5 2636 7.338 0.911 0.931 0.877 0.931 0.955 0.911 0.865 0.957
46. Y57G11C.12 nuo-3 34963 7.337 0.977 0.950 0.955 0.950 0.911 0.915 0.765 0.914 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_502790]
47. R05F9.10 sgt-1 35541 7.327 0.981 0.975 0.967 0.975 0.935 0.932 0.800 0.762 Small Glutamine-rich Tetratrico repeat protein [Source:RefSeq peptide;Acc:NP_494893]
48. C15F1.7 sod-1 36504 7.325 0.959 0.955 0.941 0.955 0.918 0.924 0.789 0.884 Superoxide dismutase [Cu-Zn] [Source:UniProtKB/Swiss-Prot;Acc:P34697]
49. F42A8.2 sdhb-1 44720 7.325 0.962 0.945 0.893 0.945 0.938 0.914 0.847 0.881 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09545]
50. Y59E9AL.7 nbet-1 13073 7.322 0.977 0.971 0.974 0.971 0.896 0.948 0.714 0.871 Nematode homolog of yeast BET1 (Blocked Early in Transport) [Source:RefSeq peptide;Acc:NP_001023538]
51. B0379.4 scpl-1 14783 7.32 0.938 0.965 0.954 0.965 0.904 0.947 0.745 0.902 SCP (Small C-terminal domain Phosphatase)-Like phosphatase [Source:RefSeq peptide;Acc:NP_740911]
52. F10E7.8 farl-11 15974 7.319 0.948 0.955 0.951 0.955 0.929 0.939 0.740 0.902 FAR (Factor ARrest) Like [Source:RefSeq peptide;Acc:NP_495467]
53. F57B10.7 tre-1 12811 7.317 0.956 0.969 0.976 0.969 0.905 0.931 0.803 0.808 Trehalase [Source:RefSeq peptide;Acc:NP_491890]
54. H38K22.3 tag-131 9318 7.316 0.975 0.968 0.960 0.968 0.882 0.869 0.789 0.905 Neuferricin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXA7]
55. C16C10.11 har-1 65692 7.314 0.920 0.945 0.879 0.945 0.963 0.946 0.811 0.905 Hemiasterlin resistant protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09254]
56. F25D7.2 tag-353 21026 7.314 0.973 0.978 0.961 0.978 0.923 0.931 0.692 0.878
57. R10E11.1 cbp-1 20447 7.311 0.978 0.971 0.967 0.971 0.895 0.884 0.736 0.909
58. F49C12.13 vha-17 47854 7.309 0.894 0.880 0.902 0.880 0.936 0.969 0.926 0.922 V-type proton ATPase subunit e [Source:UniProtKB/Swiss-Prot;Acc:Q20591]
59. D2030.9 wdr-23 12287 7.304 0.881 0.951 0.937 0.951 0.932 0.946 0.851 0.855 DDB1- and CUL4-associated factor 11 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90794]
60. F20D6.4 srp-7 7446 7.304 0.973 0.948 0.948 0.948 0.900 0.954 0.784 0.849 SeRPin [Source:RefSeq peptide;Acc:NP_001023822]
61. Y48B6A.12 men-1 20764 7.304 0.957 0.945 0.939 0.945 0.915 0.918 0.856 0.829 Malic enzyme [Source:RefSeq peptide;Acc:NP_496968]
62. F25H5.3 pyk-1 71675 7.303 0.973 0.958 0.955 0.958 0.877 0.871 0.834 0.877 Pyruvate kinase [Source:RefSeq peptide;Acc:NP_492459]
63. T26A5.9 dlc-1 59038 7.303 0.980 0.980 0.972 0.980 0.882 0.888 0.745 0.876 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
64. F42G9.1 F42G9.1 16349 7.3 0.948 0.954 0.933 0.954 0.912 0.917 0.766 0.916 Probable protein phosphatase 2C F42G9.1 [Source:UniProtKB/Swiss-Prot;Acc:P49595]
65. F49E8.7 F49E8.7 2432 7.297 0.961 0.932 0.971 0.932 0.882 0.902 0.839 0.878
66. W01A8.1 plin-1 15175 7.297 0.951 0.926 0.920 0.926 0.937 0.933 0.798 0.906 PeriLIpiN homolog [Source:RefSeq peptide;Acc:NP_001122526]
67. T05H10.5 ufd-2 30044 7.295 0.966 0.976 0.951 0.976 0.875 0.911 0.772 0.868 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
68. F45D3.5 sel-1 14277 7.289 0.952 0.955 0.960 0.955 0.934 0.937 0.740 0.856 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_506144]
69. ZK632.10 ZK632.10 28231 7.289 0.917 0.960 0.974 0.960 0.898 0.919 0.804 0.857 UPF0057 membrane protein ZK632.10 [Source:UniProtKB/Swiss-Prot;Acc:P34655]
70. M7.1 let-70 85699 7.288 0.970 0.982 0.968 0.982 0.937 0.917 0.724 0.808 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
71. F40F9.6 aagr-3 20254 7.286 0.935 0.963 0.979 0.963 0.896 0.907 0.778 0.865 Acid Alpha Glucosidase Relate [Source:RefSeq peptide;Acc:NP_001263844]
72. F53G12.1 rab-11.1 28814 7.281 0.959 0.949 0.952 0.949 0.893 0.913 0.847 0.819 RAB family [Source:RefSeq peptide;Acc:NP_490675]
73. D2096.2 praf-3 18471 7.279 0.974 0.978 0.972 0.978 0.879 0.907 0.831 0.760 Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
74. R13H8.1 daf-16 17736 7.275 0.946 0.956 0.962 0.956 0.923 0.880 0.824 0.828 Forkhead box protein O [Source:UniProtKB/Swiss-Prot;Acc:O16850]
75. F40F9.1 xbx-6 23586 7.274 0.957 0.967 0.969 0.967 0.865 0.918 0.791 0.840 X-BoX promoter element regulated [Source:RefSeq peptide;Acc:NP_741597]
76. R07H5.2 cpt-2 3645 7.273 0.922 0.955 0.923 0.955 0.890 0.920 0.802 0.906 Carnitine Palmitoyl Transferase [Source:RefSeq peptide;Acc:NP_001040977]
77. Y51H4A.3 rho-1 32656 7.269 0.936 0.912 0.903 0.912 0.909 0.963 0.843 0.891 Ras-like GTP-binding protein rhoA [Source:UniProtKB/Swiss-Prot;Acc:Q22038]
78. Y63D3A.8 Y63D3A.8 9808 7.267 0.945 0.964 0.907 0.964 0.908 0.926 0.727 0.926
79. W02D7.7 sel-9 9432 7.261 0.958 0.969 0.957 0.969 0.830 0.913 0.750 0.915 Suppressor/enhancer of lin-12 protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O17528]
80. Y67D8C.10 mca-3 22275 7.255 0.952 0.933 0.946 0.933 0.894 0.892 0.841 0.864 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_500294]
81. R07G3.1 cdc-42 35737 7.251 0.970 0.973 0.968 0.973 0.927 0.925 0.698 0.817 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
82. F53F10.3 F53F10.3 11093 7.25 0.957 0.785 0.961 0.785 0.958 0.970 0.924 0.910 Probable mitochondrial pyruvate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:O01578]
83. W08G11.4 pptr-1 18411 7.248 0.945 0.964 0.915 0.964 0.933 0.903 0.744 0.880 Protein Phosphatase 2A (Two A) Regulatory subunit [Source:RefSeq peptide;Acc:NP_507133]
84. F48E8.5 paa-1 39773 7.246 0.932 0.976 0.968 0.976 0.920 0.919 0.732 0.823 Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]
85. H19N07.4 mboa-2 5200 7.245 0.949 0.946 0.946 0.946 0.870 0.967 0.753 0.868 O-acyltransferase [Source:RefSeq peptide;Acc:NP_001256301]
86. F38H4.9 let-92 25368 7.242 0.974 0.972 0.956 0.972 0.917 0.916 0.738 0.797 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
87. F29F11.6 gsp-1 27907 7.242 0.962 0.970 0.938 0.970 0.890 0.896 0.725 0.891 Serine/threonine-protein phosphatase PP1-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q27497]
88. C24F3.1 tram-1 21190 7.241 0.964 0.983 0.958 0.983 0.868 0.890 0.694 0.901 Translocating chain-associated membrane protein [Source:RefSeq peptide;Acc:NP_501869]
89. Y37D8A.10 hpo-21 14222 7.238 0.979 0.965 0.957 0.965 0.871 0.916 0.718 0.867 Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWW1]
90. F57H12.1 arf-3 44382 7.236 0.979 0.975 0.956 0.975 0.861 0.956 0.675 0.859 ADP-Ribosylation Factor related [Source:RefSeq peptide;Acc:NP_501336]
91. C17E4.9 nkb-1 32762 7.234 0.973 0.935 0.937 0.935 0.914 0.899 0.719 0.922 Sodium/potassium-transporting ATPase subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93235]
92. Y43F4B.7 Y43F4B.7 2077 7.232 0.935 0.963 0.959 0.963 0.883 0.908 0.748 0.873
93. Y41C4A.4 crh-1 18112 7.226 0.952 0.959 0.946 0.959 0.893 0.896 0.777 0.844 CREB Homolog [Source:RefSeq peptide;Acc:NP_001022861]
94. Y37D8A.14 cco-2 79181 7.226 0.937 0.881 0.892 0.881 0.952 0.935 0.821 0.927 Cytochrome c oxidase subunit 5A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P55954]
95. C16C10.7 rnf-5 7067 7.223 0.947 0.955 0.967 0.955 0.876 0.945 0.758 0.820 RING finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09463]
96. F13D12.7 gpb-1 16974 7.223 0.952 0.947 0.948 0.947 0.891 0.879 0.771 0.888 Guanine nucleotide-binding protein subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:P17343]
97. R53.5 R53.5 5395 7.214 0.932 0.878 0.861 0.878 0.931 0.939 0.844 0.951
98. Y65B4BR.4 wwp-1 23206 7.212 0.958 0.987 0.965 0.987 0.901 0.876 0.701 0.837 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
99. C35B1.1 ubc-1 13805 7.21 0.934 0.948 0.958 0.948 0.890 0.874 0.788 0.870 Ubiquitin-conjugating enzyme E2 1 [Source:UniProtKB/Swiss-Prot;Acc:P52478]
100. R05D3.7 unc-116 19451 7.208 0.951 0.950 0.932 0.950 0.860 0.932 0.749 0.884 Kinesin heavy chain [Source:UniProtKB/Swiss-Prot;Acc:P34540]

There are 1970 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA