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Results for R05D3.12

Gene ID Gene Name Reads Transcripts Annotation
R05D3.12 R05D3.12 1282 R05D3.12a, R05D3.12b, R05D3.12c, R05D3.12d Putative DNA topoisomerase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34534]

Genes with expression patterns similar to R05D3.12

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R05D3.12 R05D3.12 1282 5 1.000 1.000 1.000 1.000 - 1.000 - - Putative DNA topoisomerase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34534]
2. Y54G2A.19 Y54G2A.19 2849 4.18 0.813 0.910 0.594 0.910 - 0.953 - -
3. T27E9.7 abcf-2 40273 4.042 0.802 0.961 0.658 0.961 - 0.660 - - ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
4. Y54G2A.31 ubc-13 22367 3.955 0.773 0.950 0.613 0.950 - 0.669 - - Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
5. F53C11.4 F53C11.4 9657 3.953 0.681 0.924 0.469 0.924 - 0.955 - -
6. T05H4.6 erfa-1 12542 3.909 0.823 0.957 0.680 0.957 - 0.492 - - Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
7. H06H21.3 eif-1.A 40990 3.898 0.784 0.951 0.662 0.951 - 0.550 - - Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
8. T01G9.6 kin-10 27360 3.894 0.795 0.956 0.637 0.956 - 0.550 - - Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
9. Y67D8C.5 eel-1 30623 3.887 0.772 0.957 0.637 0.957 - 0.564 - - Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
10. C52E4.3 snr-4 19308 3.865 0.805 0.952 0.634 0.952 - 0.522 - - Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
11. T11G6.1 hars-1 7908 3.84 0.833 0.955 0.640 0.955 - 0.457 - - Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
12. F57B9.5 byn-1 58236 3.827 0.813 0.953 0.661 0.953 - 0.447 - - Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
13. R08D7.3 eif-3.D 6740 3.823 0.822 0.957 0.660 0.957 - 0.427 - - Eukaryotic translation initiation factor 3 subunit D [Source:UniProtKB/Swiss-Prot;Acc:P30642]
14. F32E10.4 ima-3 35579 3.822 0.766 0.963 0.611 0.963 - 0.519 - - Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
15. Y71F9B.2 Y71F9B.2 1523 3.811 0.597 0.898 0.465 0.898 - 0.953 - - Phosphatidate cytidylyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G7]
16. F42A10.1 abcf-3 5557 3.804 0.741 0.966 0.691 0.966 - 0.440 - - ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
17. Y54E2A.11 eif-3.B 13795 3.801 0.808 0.965 0.662 0.965 - 0.401 - - Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
18. Y40B1B.5 eif-3.J 15061 3.799 0.750 0.950 0.623 0.950 - 0.526 - - Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
19. C33A12.3 C33A12.3 8034 3.796 0.765 0.950 0.562 0.950 - 0.569 - -
20. F46B6.7 ztf-7 25674 3.796 0.738 0.963 0.595 0.963 - 0.537 - - Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_505526]
21. B0464.5 spk-1 35112 3.795 0.769 0.951 0.582 0.951 - 0.542 - - Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
22. F22B5.9 fars-3 7209 3.781 0.784 0.951 0.700 0.951 - 0.395 - - Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
23. T23D8.4 eif-3.C 15343 3.747 0.759 0.962 0.629 0.962 - 0.435 - - Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
24. T05C3.5 dnj-19 20420 3.741 0.777 0.952 0.617 0.952 - 0.443 - - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
25. C27B7.5 C27B7.5 6331 3.731 0.851 0.957 0.589 0.957 - 0.377 - -
26. F31D4.3 fkb-6 21313 3.729 0.838 0.968 0.611 0.968 - 0.344 - - FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
27. M88.5 zbp-1 11851 3.726 0.740 0.962 0.629 0.962 - 0.433 - - Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
28. R06C7.5 adsl-1 3236 3.707 0.757 0.950 0.697 0.950 - 0.353 - - Adenylosuccinate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q21774]
29. Y48G8AL.6 smg-2 12561 3.706 0.786 0.956 0.584 0.956 - 0.424 - - Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
30. Y73B6BL.32 lsm-8 11002 3.703 0.807 0.956 0.551 0.956 - 0.433 - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
31. T21B10.1 mrpl-50 14595 3.702 0.787 0.962 0.595 0.962 - 0.396 - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
32. T12E12.3 T12E12.3 3844 3.697 0.719 0.964 0.472 0.964 - 0.578 - -
33. K12B6.1 sago-1 4325 3.691 0.599 0.735 0.662 0.735 - 0.960 - - Piwi-like protein [Source:RefSeq peptide;Acc:NP_504610]
34. F13G3.11 mrpl-13 6024 3.689 0.770 0.957 0.689 0.957 - 0.316 - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
35. C27D11.1 egl-45 28282 3.688 0.738 0.956 0.615 0.956 - 0.423 - - Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
36. K08F4.2 gtbp-1 25222 3.688 0.813 0.968 0.601 0.968 - 0.338 - - ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
37. F48E8.6 disl-2 8774 3.687 0.734 0.956 0.615 0.956 - 0.426 - - DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
38. K01C8.10 cct-4 15077 3.682 0.769 0.951 0.627 0.951 - 0.384 - - T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
39. C27H6.4 rmd-2 9015 3.677 0.690 0.764 0.502 0.764 - 0.957 - - Regulator of Microtubule Dynamics [Source:RefSeq peptide;Acc:NP_741608]
40. Y71H2AM.19 laf-1 9160 3.676 0.775 0.954 0.602 0.954 - 0.391 - - Putative DEAD-box RNA helicase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D0PV95]
41. T10F2.1 gars-1 7204 3.673 0.767 0.955 0.593 0.955 - 0.403 - - Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
42. C18A3.3 C18A3.3 9387 3.671 0.699 0.958 0.727 0.958 - 0.329 - - Probable rRNA-processing protein EBP2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09958]
43. Y111B2A.17 elpc-2 3504 3.669 0.764 0.955 0.649 0.955 - 0.346 - - ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
44. C14A4.5 crn-5 1759 3.666 0.773 0.953 0.643 0.953 - 0.344 - - Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
45. F56B3.12 skr-18 6534 3.662 0.792 0.964 0.565 0.964 - 0.377 - - SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
46. B0491.7 B0491.7 3349 3.662 0.676 0.967 0.451 0.967 - 0.601 - - Diphthine synthase [Source:RefSeq peptide;Acc:NP_496427]
47. K07A12.7 mrps-15 6325 3.661 0.746 0.953 0.618 0.953 - 0.391 - - 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
48. F28B3.7 him-1 18274 3.656 0.760 0.952 0.564 0.952 - 0.428 - - Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
49. C07H6.4 C07H6.4 6595 3.654 0.692 0.950 0.481 0.950 - 0.581 - -
50. T28D9.10 snr-3 9995 3.651 0.815 0.956 0.624 0.956 - 0.300 - - Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
51. C16C10.8 C16C10.8 4044 3.645 0.786 0.951 0.542 0.951 - 0.415 - -
52. Y50D7A.9 taco-1 5949 3.634 0.761 0.955 0.636 0.955 - 0.327 - - Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
53. D2023.5 mpst-1 10328 3.627 0.769 0.952 0.661 0.952 - 0.293 - - Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
54. F59E10.2 cyn-4 2202 3.626 0.743 0.962 0.494 0.962 - 0.465 - - Peptidyl-prolyl cis-trans isomerase 4 [Source:UniProtKB/Swiss-Prot;Acc:P52012]
55. C14C11.6 mut-14 2078 3.617 0.719 0.952 0.587 0.952 - 0.407 - - MUTator [Source:RefSeq peptide;Acc:NP_504490]
56. C34E10.5 prmt-5 12277 3.607 0.764 0.954 0.581 0.954 - 0.354 - - Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
57. Y53C12B.3 nos-3 20231 3.599 0.783 0.952 0.629 0.952 - 0.283 - - NanOS related [Source:RefSeq peptide;Acc:NP_496101]
58. C32E8.11 ubr-1 10338 3.594 0.706 0.952 0.593 0.952 - 0.391 - - E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
59. ZK1127.4 ZK1127.4 3088 3.592 0.758 0.951 0.569 0.951 - 0.363 - - Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
60. C26E6.4 rpb-2 7053 3.591 0.741 0.952 0.582 0.952 - 0.364 - - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
61. ZC434.5 ears-1 4725 3.586 0.751 0.952 0.610 0.952 - 0.321 - - glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
62. M01E11.3 M01E11.3 1946 3.583 0.769 0.955 0.524 0.955 - 0.380 - -
63. B0035.12 sart-3 7188 3.582 0.781 0.951 0.594 0.951 - 0.305 - - human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
64. F36A4.7 ama-1 13620 3.582 0.676 0.951 0.575 0.951 - 0.429 - - DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
65. F58A4.8 tbg-1 2839 3.571 0.756 0.955 0.610 0.955 - 0.295 - - Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
66. C08B11.6 arp-6 4646 3.564 0.788 0.954 0.515 0.954 - 0.353 - - Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
67. C14A4.1 dohh-1 4890 3.563 0.738 0.953 0.658 0.953 - 0.261 - - Deoxyhypusine hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q17949]
68. C14A4.14 mrps-22 7966 3.542 0.737 0.965 0.606 0.965 - 0.269 - - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
69. T08A11.2 T08A11.2 12269 3.54 0.662 0.953 0.468 0.953 - 0.504 - -
70. Y38A10A.5 crt-1 97519 3.538 0.746 0.579 0.676 0.579 - 0.958 - - Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
71. F10G7.1 tag-151 9031 3.535 0.691 0.967 0.650 0.967 - 0.260 - - Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
72. K07C5.4 K07C5.4 24125 3.527 0.723 0.953 0.507 0.953 - 0.391 - - Uncharacterized NOP5 family protein K07C5.4 [Source:UniProtKB/Swiss-Prot;Acc:Q21276]
73. C06A1.5 rpb-6 7515 3.527 0.771 0.952 0.562 0.952 - 0.290 - - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
74. W03G9.3 enu-3.3 3586 3.524 0.702 0.952 0.595 0.952 - 0.323 - - ENhancer of Uncoordination [Source:RefSeq peptide;Acc:NP_491487]
75. ZK652.1 snr-5 5993 3.519 0.720 0.951 0.531 0.951 - 0.366 - - Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
76. T22D1.10 ruvb-2 6505 3.513 0.746 0.955 0.640 0.955 - 0.217 - - RuvB-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH2]
77. Y105E8B.3 riok-2 5531 3.512 0.706 0.959 0.588 0.959 - 0.300 - - Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
78. T12E12.2 cec-6 4758 3.511 0.722 0.959 0.597 0.959 - 0.274 - - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
79. Y23H5B.6 Y23H5B.6 5886 3.506 0.738 0.966 0.546 0.966 - 0.290 - -
80. F56D12.5 vig-1 42594 3.5 0.707 0.953 0.605 0.953 - 0.282 - - VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
81. D2030.6 prg-1 26751 3.499 0.757 0.963 0.559 0.963 - 0.257 - - Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
82. ZK381.4 pgl-1 20651 3.481 0.769 0.954 0.581 0.954 - 0.223 - - P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
83. T07C4.10 T07C4.10 1563 3.479 0.750 0.953 0.533 0.953 - 0.290 - -
84. C25A1.10 dao-5 18351 3.476 0.708 0.955 0.595 0.955 - 0.263 - - Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
85. ZK616.5 ZK616.5 10527 3.47 0.716 0.950 0.524 0.950 - 0.330 - -
86. Y48B6A.3 xrn-2 4881 3.467 0.736 0.957 0.590 0.957 - 0.227 - - 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
87. K10D2.3 cid-1 7175 3.462 0.717 0.958 0.570 0.958 - 0.259 - - Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
88. ZK381.1 him-3 4913 3.46 0.777 0.952 0.568 0.952 - 0.211 - - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
89. C14A4.4 crn-3 6558 3.456 0.722 0.953 0.588 0.953 - 0.240 - - Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
90. F01F1.7 ddx-23 4217 3.453 0.723 0.963 0.506 0.963 - 0.298 - - DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
91. T23G11.3 gld-1 41748 3.45 0.793 0.954 0.582 0.954 - 0.167 - - Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
92. ZK524.3 lars-2 1894 3.443 0.731 0.950 0.551 0.950 - 0.261 - - Leucyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001021875]
93. W08D2.7 mtr-4 2699 3.438 0.656 0.973 0.529 0.973 - 0.307 - - mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
94. T21G5.3 glh-1 16470 3.437 0.701 0.970 0.602 0.970 - 0.194 - - ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
95. F55A12.8 nath-10 4253 3.436 0.665 0.955 0.601 0.955 - 0.260 - - N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
96. F52C12.2 F52C12.2 4779 3.432 0.769 0.958 0.468 0.958 - 0.279 - - Probable ribosome biogenesis protein CELE_F52C12.2 [Source:RefSeq peptide;Acc:NP_741332]
97. Y66D12A.8 Y66D12A.8 3949 3.431 0.744 0.950 0.471 0.950 - 0.316 - -
98. F09F7.3 rpc-2 9751 3.427 0.691 0.952 0.611 0.952 - 0.221 - - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
99. Y47D3A.26 smc-3 6256 3.412 0.669 0.956 0.576 0.956 - 0.255 - - Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
100. Y57A10A.25 parn-2 2634 3.411 0.693 0.952 0.607 0.952 - 0.207 - - PARN (Poly(A)-specific RiboNuclease) homolog [Source:RefSeq peptide;Acc:NP_496602]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA