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Results for C29A12.3

Gene ID Gene Name Reads Transcripts Annotation
C29A12.3 lig-1 3907 C29A12.3a, C29A12.3b DNA ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q27474]

Genes with expression patterns similar to C29A12.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C29A12.3 lig-1 3907 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q27474]
2. C18G1.5 hil-4 21692 7.512 0.970 0.951 0.940 0.951 0.937 0.939 0.884 0.940 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
3. B0252.4 cyn-10 3765 7.504 0.953 0.963 0.943 0.963 0.949 0.934 0.837 0.962 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
4. Y47G6A.11 msh-6 2767 7.498 0.931 0.913 0.887 0.913 0.957 0.978 0.957 0.962 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491163]
5. T06D10.2 chaf-1 8121 7.488 0.954 0.945 0.958 0.945 0.948 0.980 0.840 0.918 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
6. E01A2.4 let-504 9788 7.479 0.915 0.921 0.923 0.921 0.948 0.978 0.898 0.975
7. Y71G12B.1 chaf-2 3451 7.478 0.957 0.954 0.927 0.954 0.950 0.939 0.859 0.938 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
8. F35B12.5 sas-5 4606 7.475 0.974 0.947 0.936 0.947 0.925 0.951 0.868 0.927 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
9. W01B6.9 ndc-80 4670 7.472 0.956 0.971 0.879 0.971 0.940 0.954 0.850 0.951 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
10. T20G5.11 rde-4 3966 7.461 0.926 0.950 0.900 0.950 0.924 0.956 0.894 0.961 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
11. M03C11.4 hat-1 3839 7.46 0.946 0.953 0.923 0.953 0.920 0.924 0.934 0.907 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
12. T01C3.1 cdt-2 5193 7.46 0.942 0.936 0.917 0.936 0.939 0.956 0.882 0.952 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
13. C32F10.5 hmg-3 5776 7.454 0.954 0.922 0.925 0.922 0.965 0.980 0.846 0.940 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
14. Y71F9AL.18 parp-1 3736 7.45 0.969 0.961 0.964 0.961 0.902 0.876 0.882 0.935 Poly(ADP-ribose) polymerase pme-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4H4]
15. CD4.7 zhit-1 1452 7.447 0.922 0.951 0.931 0.951 0.958 0.913 0.867 0.954 Zinc finger, HIT-type [Source:RefSeq peptide;Acc:NP_504477]
16. C09G9.6 oma-1 18743 7.443 0.950 0.951 0.912 0.951 0.925 0.968 0.839 0.947
17. T09A5.8 cec-3 5813 7.439 0.939 0.944 0.952 0.944 0.935 0.942 0.872 0.911 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
18. Y34D9A.4 spd-1 3396 7.438 0.954 0.980 0.858 0.980 0.930 0.921 0.905 0.910 SPD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED58]
19. R11A8.7 R11A8.7 15531 7.437 0.927 0.920 0.928 0.920 0.955 0.984 0.896 0.907 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
20. F23B2.6 aly-2 7301 7.436 0.944 0.921 0.957 0.921 0.939 0.967 0.874 0.913 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
21. Y73F8A.34 tag-349 7966 7.426 0.960 0.958 0.900 0.958 0.931 0.944 0.826 0.949
22. C36A4.8 brc-1 1664 7.423 0.905 0.927 0.970 0.927 0.937 0.944 0.853 0.960 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
23. Y47G6A.8 crn-1 3494 7.415 0.956 0.933 0.894 0.933 0.906 0.903 0.937 0.953 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
24. F12F6.3 rib-1 10524 7.413 0.967 0.929 0.885 0.929 0.924 0.934 0.901 0.944 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
25. W03D2.4 pcn-1 20288 7.412 0.964 0.972 0.941 0.972 0.917 0.890 0.855 0.901 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
26. F10B5.6 emb-27 2578 7.41 0.949 0.961 0.884 0.961 0.943 0.951 0.848 0.913 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
27. T05F1.6 hsr-9 13312 7.408 0.958 0.927 0.854 0.927 0.929 0.955 0.889 0.969
28. R01H2.6 ubc-18 13394 7.404 0.914 0.949 0.963 0.949 0.934 0.949 0.850 0.896 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
29. C26E6.5 fsn-1 6615 7.397 0.972 0.911 0.881 0.911 0.951 0.951 0.847 0.973 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
30. Y49F6B.4 smu-2 4164 7.397 0.924 0.930 0.916 0.930 0.921 0.973 0.910 0.893 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
31. T07A9.6 daf-18 15998 7.394 0.915 0.939 0.907 0.939 0.929 0.958 0.858 0.949 DAF-18; DAF-18 protein; PTEN phosphatidylinositol 3' phosphatase homolog DAF-18; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EE01]
32. C09H10.6 nasp-1 6094 7.393 0.971 0.959 0.943 0.959 0.889 0.923 0.828 0.921 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
33. T07F8.3 gld-3 9324 7.392 0.947 0.937 0.872 0.937 0.955 0.947 0.874 0.923 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
34. C47D12.8 xpf-1 6173 7.391 0.960 0.935 0.881 0.935 0.922 0.939 0.858 0.961 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
35. K04C2.4 brd-1 2439 7.385 0.974 0.925 0.905 0.925 0.893 0.945 0.875 0.943 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
36. F18E2.3 scc-3 13464 7.383 0.954 0.916 0.902 0.916 0.945 0.972 0.848 0.930 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
37. F25B5.2 nop-1 4127 7.381 0.966 0.931 0.900 0.931 0.938 0.942 0.831 0.942 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
38. F48E8.7 skpt-1 2308 7.376 0.976 0.971 0.940 0.971 0.851 0.868 0.880 0.919 SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
39. B0205.1 B0205.1 2403 7.376 0.958 0.920 0.915 0.920 0.966 0.943 0.837 0.917
40. T01G9.4 npp-2 5361 7.375 0.946 0.927 0.904 0.927 0.945 0.952 0.835 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
41. Y2H9A.1 mes-4 3566 7.375 0.954 0.897 0.956 0.897 0.916 0.964 0.851 0.940 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
42. T24F1.2 samp-1 8422 7.375 0.958 0.932 0.925 0.932 0.935 0.914 0.841 0.938 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
43. C02B10.2 snpn-1 5519 7.366 0.957 0.900 0.897 0.900 0.945 0.946 0.881 0.940 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
44. F16D3.2 rsd-6 8211 7.364 0.966 0.942 0.906 0.942 0.928 0.946 0.835 0.899
45. C07G2.1 cpg-1 22604 7.362 0.922 0.919 0.909 0.919 0.910 0.954 0.932 0.897 Chondroitin proteoglycan 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17802]
46. ZK858.1 gld-4 14162 7.359 0.955 0.961 0.939 0.961 0.924 0.936 0.782 0.901 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
47. F55F8.4 cir-1 9437 7.358 0.912 0.926 0.869 0.926 0.939 0.964 0.914 0.908 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
48. F10E9.8 sas-4 3703 7.356 0.963 0.940 0.896 0.940 0.900 0.922 0.898 0.897 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
49. C39E9.13 rfc-3 9443 7.355 0.934 0.947 0.905 0.947 0.938 0.952 0.844 0.888 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
50. Y49E10.3 pph-4.2 8662 7.353 0.959 0.931 0.908 0.931 0.931 0.929 0.788 0.976 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
51. F11A10.1 lex-1 13720 7.352 0.975 0.942 0.912 0.942 0.948 0.967 0.782 0.884 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
52. R07G3.3 npp-21 3792 7.352 0.888 0.931 0.944 0.931 0.951 0.957 0.816 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
53. T20B12.2 tbp-1 9014 7.35 0.954 0.902 0.894 0.902 0.950 0.941 0.900 0.907 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
54. M106.1 mix-1 7950 7.348 0.913 0.934 0.889 0.934 0.924 0.971 0.831 0.952 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
55. T12D8.3 acbp-5 6816 7.348 0.949 0.918 0.923 0.918 0.920 0.912 0.852 0.956 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
56. C16C8.5 C16C8.5 1129 7.343 0.935 0.927 0.874 0.927 0.942 0.970 0.834 0.934
57. K06H7.6 apc-2 2979 7.343 0.895 0.926 0.931 0.926 0.907 0.883 0.922 0.953 Anaphase-promoting complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P34514]
58. F32A5.1 ada-2 8343 7.342 0.950 0.946 0.915 0.946 0.927 0.957 0.820 0.881 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
59. C09G4.3 cks-1 17852 7.342 0.946 0.942 0.877 0.942 0.958 0.896 0.879 0.902 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
60. R119.7 rnp-8 5640 7.338 0.931 0.913 0.856 0.913 0.953 0.930 0.883 0.959 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_001293232]
61. C25D7.6 mcm-3 15241 7.337 0.966 0.959 0.958 0.959 0.912 0.851 0.842 0.890 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
62. Y17G9B.3 cyp-31A3 1709 7.336 0.934 0.933 0.867 0.933 0.914 0.915 0.878 0.962 CYtochrome P450 family [Source:RefSeq peptide;Acc:NP_500637]
63. C50B6.2 nasp-2 9744 7.335 0.894 0.942 0.923 0.942 0.944 0.957 0.845 0.888 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_506298]
64. D1014.8 spr-1 1711 7.333 0.958 0.923 0.840 0.923 0.902 0.958 0.903 0.926 REST corepressor spr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18919]
65. K06A5.7 cdc-25.1 14961 7.332 0.965 0.948 0.929 0.948 0.897 0.857 0.835 0.953 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
66. F37A4.8 isw-1 9337 7.328 0.973 0.941 0.897 0.941 0.952 0.935 0.822 0.867 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
67. W03G1.6 pig-1 5015 7.325 0.948 0.951 0.915 0.951 0.917 0.914 0.815 0.914 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
68. W03F9.5 ttb-1 8682 7.323 0.954 0.922 0.881 0.922 0.934 0.928 0.887 0.895 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
69. ZK686.4 snu-23 9040 7.322 0.952 0.917 0.908 0.917 0.914 0.907 0.918 0.889 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
70. R05H5.3 R05H5.3 15041 7.322 0.959 0.950 0.814 0.950 0.922 0.925 0.891 0.911
71. F36D4.3 hum-2 16493 7.322 0.962 0.953 0.861 0.953 0.914 0.929 0.855 0.895 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
72. F23F1.1 nfyc-1 9983 7.321 0.950 0.932 0.912 0.932 0.918 0.886 0.849 0.942 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
73. F45G2.3 exo-1 1969 7.321 0.953 0.956 0.864 0.956 0.866 0.929 0.867 0.930 EXOnuclease [Source:RefSeq peptide;Acc:NP_499770]
74. F10B5.5 pch-2 2299 7.318 0.907 0.938 0.882 0.938 0.894 0.923 0.868 0.968 Putative pachytene checkpoint protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09535]
75. EEED8.1 tofu-6 3962 7.317 0.956 0.951 0.937 0.951 0.903 0.871 0.830 0.918 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
76. Y106G6H.12 duo-3 2619 7.317 0.938 0.932 0.923 0.932 0.913 0.969 0.799 0.911 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_001293463]
77. C39E9.12 C39E9.12 3588 7.316 0.952 0.896 0.899 0.896 0.943 0.943 0.877 0.910
78. W02D9.1 pri-2 6048 7.315 0.959 0.913 0.939 0.913 0.919 0.928 0.841 0.903 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
79. K07C5.8 cash-1 10523 7.315 0.951 0.950 0.839 0.950 0.943 0.920 0.884 0.878 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
80. B0025.2 csn-2 5205 7.311 0.927 0.934 0.890 0.934 0.950 0.914 0.849 0.913 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
81. F52C9.7 mog-3 9880 7.311 0.956 0.945 0.890 0.945 0.913 0.914 0.850 0.898 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
82. Y39A1B.3 dpy-28 4459 7.311 0.950 0.942 0.912 0.942 0.955 0.928 0.832 0.850 Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
83. F35G12.8 smc-4 6202 7.309 0.939 0.898 0.947 0.898 0.933 0.922 0.805 0.967 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
84. C27B7.1 spr-2 14958 7.309 0.960 0.933 0.897 0.933 0.910 0.878 0.850 0.948 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
85. Y54E2A.3 tac-1 6308 7.308 0.957 0.908 0.889 0.908 0.941 0.920 0.856 0.929 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
86. F33H2.5 pole-1 3734 7.304 0.952 0.961 0.937 0.961 0.884 0.860 0.836 0.913 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
87. Y11D7A.12 flh-1 4612 7.304 0.959 0.929 0.888 0.929 0.928 0.901 0.838 0.932 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
88. F40E3.2 mage-1 1696 7.304 0.941 0.918 0.880 0.918 0.954 0.954 0.803 0.936 Melanoma-Associated-antiGEn homolog [Source:RefSeq peptide;Acc:NP_491018]
89. F21D5.2 otub-3 8469 7.303 0.942 0.960 0.961 0.960 0.865 0.850 0.853 0.912 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_001255319]
90. Y54G9A.6 bub-3 9123 7.303 0.953 0.922 0.932 0.922 0.964 0.929 0.786 0.895 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
91. C38D4.3 mel-28 3515 7.3 0.937 0.883 0.921 0.883 0.937 0.973 0.848 0.918
92. Y110A7A.8 prp-31 4436 7.294 0.953 0.903 0.871 0.903 0.943 0.928 0.879 0.914 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
93. B0035.3 B0035.3 4118 7.293 0.970 0.940 0.838 0.940 0.899 0.883 0.878 0.945
94. F28B3.7 him-1 18274 7.292 0.956 0.894 0.884 0.894 0.971 0.925 0.853 0.915 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
95. Y53H1A.5 nfya-2 4166 7.292 0.963 0.866 0.894 0.866 0.931 0.928 0.917 0.927 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
96. C27F2.10 C27F2.10 4214 7.289 0.967 0.945 0.893 0.945 0.912 0.903 0.819 0.905 PCI domain-containing protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95QU0]
97. Y65B4BL.2 deps-1 18277 7.289 0.969 0.917 0.894 0.917 0.926 0.912 0.815 0.939
98. B0495.6 moa-2 6366 7.288 0.953 0.921 0.918 0.921 0.924 0.918 0.799 0.934
99. F27C8.6 trcs-1 4737 7.288 0.870 0.915 0.929 0.915 0.885 0.953 0.883 0.938 TRansport of membrane to Cell Surface [Source:RefSeq peptide;Acc:NP_501702]
100. Y71H2B.6 mdt-19 2609 7.287 0.930 0.922 0.882 0.922 0.915 0.969 0.887 0.860 Mediator of RNA polymerase II transcription subunit 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4F2]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA