C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y106G6H.2

Gene ID Gene Name Reads Transcripts Annotation
Y106G6H.2 pab-1 96744 Y106G6H.2a.1, Y106G6H.2a.2, Y106G6H.2a.3, Y106G6H.2a.4, Y106G6H.2a.5, Y106G6H.2b.1, Y106G6H.2b.2, Y106G6H.2c.1, Y106G6H.2c.2, Y106G6H.2c.3, Y106G6H.2c.4, Y106G6H.2c.5 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]

Genes with expression patterns similar to Y106G6H.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y106G6H.2 pab-1 96744 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
2. F40F8.10 rps-9 105818 7.807 0.964 0.978 0.974 0.978 0.984 0.984 0.955 0.990 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
3. Y105E8A.16 rps-20 146067 7.794 0.966 0.961 0.964 0.961 0.994 0.974 0.981 0.993 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
4. F56F3.5 rps-1 85503 7.779 0.980 0.989 0.979 0.989 0.904 0.973 0.976 0.989 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
5. T05E11.1 rps-5 79298 7.761 0.983 0.976 0.979 0.976 0.908 0.983 0.976 0.980 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
6. F28C6.7 rpl-26 113192 7.758 0.976 0.978 0.970 0.978 0.987 0.919 0.965 0.985 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
7. ZK1010.1 ubq-2 87842 7.743 0.965 0.980 0.984 0.980 0.909 0.984 0.960 0.981 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
8. K02B2.5 rps-25 118421 7.74 0.963 0.966 0.973 0.966 0.984 0.936 0.963 0.989 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
9. K04D7.2 mspn-1 48187 7.738 0.983 0.986 0.983 0.986 0.864 0.982 0.972 0.982 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
10. F13B10.2 rpl-3 171741 7.73 0.964 0.975 0.947 0.975 0.987 0.935 0.967 0.980 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
11. Y45F10D.12 rpl-18 104658 7.72 0.963 0.964 0.954 0.964 0.995 0.918 0.977 0.985 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
12. F39B2.6 rps-26 137659 7.719 0.974 0.980 0.966 0.980 0.896 0.972 0.970 0.981 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
13. R11D1.8 rpl-28 62242 7.715 0.972 0.977 0.981 0.977 0.876 0.986 0.971 0.975 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
14. F53G12.10 rpl-7 78552 7.705 0.966 0.968 0.975 0.968 0.890 0.979 0.976 0.983 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
15. K04D7.1 rack-1 48949 7.703 0.974 0.987 0.984 0.987 0.827 0.989 0.970 0.985 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
16. C32E8.2 rpl-13 70096 7.695 0.980 0.985 0.978 0.985 0.829 0.982 0.982 0.974 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
17. B0336.9 swp-1 52442 7.692 0.976 0.983 0.986 0.983 0.830 0.977 0.975 0.982 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
18. T01C3.6 rps-16 97002 7.69 0.972 0.973 0.979 0.973 0.984 0.848 0.974 0.987 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
19. C09D4.5 rpl-19 56944 7.682 0.967 0.984 0.986 0.984 0.816 0.981 0.977 0.987 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
20. H06H21.3 eif-1.A 40990 7.681 0.969 0.981 0.981 0.981 0.853 0.981 0.970 0.965 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
21. T05F1.3 rps-19 88407 7.679 0.975 0.978 0.970 0.978 0.858 0.975 0.962 0.983 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
22. Y48G8AL.8 rpl-17 77686 7.675 0.977 0.971 0.965 0.971 0.986 0.881 0.946 0.978 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
23. F57B9.5 byn-1 58236 7.67 0.976 0.975 0.984 0.975 0.886 0.960 0.968 0.946 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
24. F53A3.3 rps-22 81093 7.669 0.982 0.979 0.985 0.979 0.827 0.978 0.961 0.978 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
25. T27E9.7 abcf-2 40273 7.66 0.982 0.979 0.953 0.979 0.825 0.971 0.983 0.988 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
26. R151.3 rpl-6 89081 7.658 0.974 0.977 0.969 0.977 0.907 0.898 0.966 0.990 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
27. D1007.12 rpl-24.1 73724 7.658 0.975 0.982 0.968 0.982 0.817 0.983 0.964 0.987 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
28. ZK652.4 rpl-35 89991 7.657 0.970 0.963 0.955 0.963 0.873 0.980 0.972 0.981 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
29. Y65B4BR.5 icd-2 58321 7.654 0.967 0.976 0.973 0.976 0.892 0.961 0.961 0.948 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
30. H06I04.4 ubl-1 57718 7.651 0.988 0.974 0.942 0.974 0.865 0.973 0.966 0.969 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
31. F28D1.7 rps-23 93860 7.651 0.958 0.974 0.970 0.974 0.898 0.913 0.976 0.988 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
32. ZC434.2 rps-7 142021 7.649 0.968 0.968 0.974 0.968 0.887 0.928 0.976 0.980 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
33. JC8.3 rpl-12 52728 7.648 0.967 0.982 0.958 0.982 0.824 0.989 0.965 0.981 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
34. C53H9.1 rpl-27 59496 7.648 0.957 0.969 0.949 0.969 0.854 0.992 0.972 0.986 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
35. C56C10.8 icd-1 89788 7.647 0.958 0.970 0.980 0.970 0.893 0.969 0.952 0.955 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
36. F17C11.9 eef-1G 37911 7.642 0.981 0.988 0.982 0.988 0.794 0.975 0.967 0.967 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
37. Y71F9AL.13 rpl-1 143484 7.638 0.972 0.959 0.979 0.959 0.889 0.932 0.969 0.979 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
38. F10E7.7 rpl-33 81733 7.635 0.933 0.960 0.912 0.960 0.986 0.931 0.968 0.985 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
39. C23G10.3 rps-3 69779 7.626 0.963 0.966 0.951 0.966 0.858 0.975 0.980 0.967 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
40. T27F7.3 eif-1 28176 7.617 0.945 0.948 0.965 0.948 0.869 0.995 0.970 0.977 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
41. K04G2.1 iftb-1 12590 7.615 0.945 0.952 0.966 0.952 0.883 0.983 0.979 0.955 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
42. M01F1.2 rpl-16 99563 7.615 0.983 0.969 0.953 0.969 0.867 0.915 0.973 0.986 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
43. F54H12.6 eef-1B.1 37095 7.615 0.958 0.975 0.957 0.975 0.828 0.978 0.956 0.988 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
44. C27A2.2 rpl-22 63091 7.612 0.969 0.948 0.972 0.948 0.851 0.983 0.959 0.982 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
45. F37C12.11 rps-21 62646 7.612 0.972 0.962 0.957 0.962 0.848 0.979 0.965 0.967 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
46. F25H5.4 eef-2 34846 7.611 0.971 0.986 0.980 0.986 0.813 0.965 0.954 0.956 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
47. Y37E3.7 rla-1 55876 7.611 0.969 0.973 0.961 0.973 0.829 0.964 0.963 0.979 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
48. D2013.7 eif-3.F 21004 7.609 0.952 0.978 0.955 0.978 0.836 0.962 0.975 0.973 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
49. Y43B11AR.4 rps-4 76546 7.601 0.975 0.974 0.952 0.974 0.816 0.981 0.945 0.984 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
50. Y39A1C.3 cey-4 50694 7.599 0.955 0.975 0.974 0.975 0.835 0.969 0.945 0.971 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
51. T01G9.6 kin-10 27360 7.599 0.972 0.974 0.975 0.974 0.833 0.975 0.932 0.964 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
52. Y40B1B.5 eif-3.J 15061 7.594 0.954 0.965 0.951 0.965 0.846 0.973 0.973 0.967 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
53. B0464.1 dars-1 12331 7.591 0.963 0.969 0.969 0.969 0.816 0.979 0.981 0.945 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
54. C27D11.1 egl-45 28282 7.589 0.964 0.973 0.967 0.973 0.848 0.953 0.975 0.936 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
55. Y62E10A.1 rla-2 59665 7.589 0.963 0.975 0.987 0.975 0.783 0.950 0.973 0.983 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
56. T08B2.9 fars-1 12650 7.587 0.950 0.965 0.961 0.965 0.854 0.961 0.975 0.956 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
57. B0205.7 kin-3 29775 7.586 0.958 0.965 0.964 0.965 0.841 0.967 0.955 0.971 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
58. R13A5.8 rpl-9 140064 7.584 0.977 0.973 0.971 0.973 0.803 0.935 0.975 0.977 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
59. Y48B6A.2 rpl-43 104489 7.58 0.957 0.971 0.974 0.971 0.879 0.907 0.965 0.956 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
60. Y57G11C.16 rps-18 76576 7.579 0.972 0.984 0.959 0.984 0.802 0.944 0.949 0.985 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
61. C26F1.4 rps-30 77534 7.577 0.972 0.959 0.924 0.959 0.833 0.983 0.963 0.984 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
62. Y54E10A.9 vbh-1 28746 7.573 0.959 0.964 0.964 0.964 0.857 0.978 0.953 0.934 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
63. C42C1.14 rpl-34 146539 7.571 0.965 0.959 0.960 0.959 0.844 0.927 0.979 0.978 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
64. F25H2.11 tct-1 41796 7.57 0.957 0.967 0.967 0.967 0.835 0.968 0.934 0.975 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
65. M117.2 par-5 64868 7.568 0.939 0.977 0.969 0.977 0.864 0.964 0.934 0.944 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
66. Y54E2A.11 eif-3.B 13795 7.566 0.955 0.975 0.963 0.975 0.848 0.939 0.963 0.948 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
67. B0513.3 rpl-29 102432 7.565 0.933 0.965 0.974 0.965 0.847 0.921 0.976 0.984 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
68. Y18D10A.19 fkb-2 48128 7.563 0.974 0.966 0.964 0.966 0.875 0.934 0.955 0.929 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
69. T20H4.3 pars-1 8167 7.561 0.953 0.955 0.934 0.955 0.855 0.982 0.967 0.960 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
70. F39B2.10 dnj-12 35162 7.555 0.954 0.960 0.958 0.960 0.831 0.958 0.959 0.975 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
71. B0393.1 rps-0 89081 7.551 0.969 0.960 0.935 0.960 0.858 0.941 0.951 0.977 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
72. F37C12.9 rps-14 106692 7.551 0.943 0.963 0.941 0.963 0.866 0.919 0.972 0.984 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
73. F26D10.3 hsp-1 98277 7.548 0.973 0.982 0.966 0.982 0.792 0.972 0.927 0.954 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
74. T07A9.9 nog-1 19728 7.544 0.942 0.968 0.946 0.968 0.886 0.968 0.943 0.923 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
75. Y49E10.2 glrx-5 9672 7.54 0.942 0.963 0.966 0.963 0.842 0.949 0.958 0.957 Glutaredoxin [Source:RefSeq peptide;Acc:NP_499610]
76. F25H2.10 rla-0 79986 7.54 0.970 0.968 0.971 0.968 0.826 0.887 0.964 0.986 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
77. F26F4.10 rars-1 9971 7.535 0.956 0.942 0.944 0.942 0.849 0.972 0.970 0.960 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
78. C37A2.8 C37A2.8 3887 7.532 0.980 0.893 0.974 0.893 0.869 0.986 0.953 0.984
79. B0250.1 rpl-2 100592 7.529 0.974 0.969 0.973 0.969 0.883 0.805 0.977 0.979 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
80. Y41D4B.5 rps-28 46003 7.529 0.956 0.939 0.957 0.939 0.828 0.980 0.956 0.974 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
81. F36A4.7 ama-1 13620 7.528 0.938 0.962 0.938 0.962 0.855 0.979 0.944 0.950 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
82. T08B2.10 rps-17 38071 7.527 0.960 0.946 0.968 0.946 0.798 0.982 0.957 0.970 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
83. K08F11.3 cif-1 10218 7.525 0.952 0.956 0.956 0.956 0.858 0.952 0.959 0.936 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
84. C49H3.11 rps-2 152343 7.524 0.975 0.974 0.904 0.974 0.835 0.923 0.966 0.973 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
85. T23D8.4 eif-3.C 15343 7.52 0.980 0.970 0.966 0.970 0.787 0.945 0.962 0.940 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
86. F36A2.6 rps-15 147653 7.519 0.904 0.973 0.932 0.973 0.876 0.932 0.960 0.969 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
87. Y67D8C.5 eel-1 30623 7.518 0.977 0.977 0.958 0.977 0.789 0.962 0.938 0.940 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
88. H19N07.1 erfa-3 19869 7.516 0.951 0.965 0.938 0.965 0.845 0.973 0.940 0.939 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
89. T12D8.8 hip-1 18283 7.515 0.918 0.932 0.937 0.932 0.878 0.982 0.971 0.965 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
90. C53D5.6 imb-3 28921 7.512 0.959 0.971 0.958 0.971 0.871 0.941 0.958 0.883 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
91. Y41E3.4 qars-1 4391 7.512 0.949 0.939 0.939 0.939 0.875 0.969 0.979 0.923 Probable glutamine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:O62431]
92. K01C8.10 cct-4 15077 7.512 0.946 0.963 0.938 0.963 0.802 0.949 0.972 0.979 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
93. Y48G8AL.6 smg-2 12561 7.511 0.972 0.961 0.925 0.961 0.846 0.971 0.959 0.916 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
94. B0412.4 rps-29 35461 7.511 0.943 0.951 0.937 0.951 0.849 0.964 0.944 0.972 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
95. T12D8.2 drr-2 16208 7.508 0.950 0.964 0.935 0.964 0.888 0.937 0.970 0.900 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
96. C14B9.7 rpl-21 118616 7.508 0.987 0.973 0.979 0.973 0.699 0.936 0.981 0.980 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
97. Y37E3.10 Y37E3.10 6492 7.507 0.962 0.940 0.968 0.940 0.889 0.866 0.959 0.983
98. R144.7 larp-1 24669 7.497 0.981 0.967 0.929 0.967 0.843 0.954 0.931 0.925 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
99. T24B8.1 rpl-32 67285 7.497 0.972 0.974 0.971 0.974 0.832 0.841 0.958 0.975 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
100. Y57A10A.18 pqn-87 31844 7.497 0.943 0.945 0.926 0.945 0.877 0.973 0.924 0.964 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]

There are 754 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA