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Results for T01C3.6

Gene ID Gene Name Reads Transcripts Annotation
T01C3.6 rps-16 97002 T01C3.6.1, T01C3.6.2 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]

Genes with expression patterns similar to T01C3.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T01C3.6 rps-16 97002 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
2. K02B2.5 rps-25 118421 7.761 0.983 0.973 0.952 0.973 0.990 0.914 0.988 0.988 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
3. F56F3.5 rps-1 85503 7.701 0.992 0.981 0.958 0.981 0.891 0.912 0.992 0.994 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
4. Y106G6H.2 pab-1 96744 7.69 0.972 0.973 0.979 0.973 0.984 0.848 0.974 0.987 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
5. F13B10.2 rpl-3 171741 7.685 0.963 0.968 0.906 0.968 0.991 0.915 0.989 0.985 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
6. ZC434.2 rps-7 142021 7.684 0.972 0.974 0.963 0.974 0.906 0.914 0.996 0.985 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
7. T24B8.1 rpl-32 67285 7.683 0.969 0.981 0.962 0.981 0.838 0.994 0.972 0.986 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
8. Y105E8A.16 rps-20 146067 7.677 0.981 0.968 0.938 0.968 0.985 0.865 0.978 0.994 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
9. F40F8.10 rps-9 105818 7.676 0.970 0.968 0.962 0.968 0.991 0.853 0.980 0.984 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
10. B0250.1 rpl-2 100592 7.666 0.974 0.961 0.932 0.961 0.888 0.992 0.977 0.981 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
11. ZK1010.1 ubq-2 87842 7.65 0.981 0.985 0.963 0.985 0.903 0.875 0.968 0.990 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
12. F53A3.3 rps-22 81093 7.633 0.985 0.990 0.967 0.990 0.816 0.918 0.983 0.984 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
13. Y48B6A.2 rpl-43 104489 7.625 0.984 0.973 0.966 0.973 0.872 0.905 0.992 0.960 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
14. Y71F9AL.13 rpl-1 143484 7.623 0.984 0.962 0.950 0.962 0.911 0.882 0.991 0.981 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
15. B0336.9 swp-1 52442 7.613 0.989 0.977 0.978 0.977 0.822 0.892 0.992 0.986 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
16. F39B2.6 rps-26 137659 7.61 0.975 0.975 0.947 0.975 0.915 0.860 0.986 0.977 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
17. T05E11.1 rps-5 79298 7.61 0.978 0.960 0.953 0.960 0.905 0.885 0.989 0.980 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
18. K04D7.2 mspn-1 48187 7.608 0.978 0.974 0.952 0.974 0.859 0.914 0.975 0.982 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
19. K11H12.2 rpl-15 96281 7.604 0.976 0.962 0.940 0.962 0.841 0.993 0.955 0.975 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
20. T05F1.3 rps-19 88407 7.6 0.985 0.968 0.945 0.968 0.854 0.909 0.986 0.985 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
21. Y62E10A.1 rla-2 59665 7.6 0.979 0.989 0.969 0.989 0.779 0.919 0.986 0.990 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
22. C32E8.2 rpl-13 70096 7.592 0.990 0.981 0.963 0.981 0.823 0.880 0.991 0.983 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
23. C09D4.5 rpl-19 56944 7.58 0.977 0.976 0.972 0.976 0.807 0.899 0.987 0.986 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
24. F28C6.7 rpl-26 113192 7.58 0.983 0.978 0.955 0.978 0.988 0.721 0.989 0.988 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
25. F37C12.9 rps-14 106692 7.579 0.987 0.963 0.917 0.963 0.869 0.904 0.989 0.987 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
26. ZK652.4 rpl-35 89991 7.566 0.993 0.969 0.925 0.969 0.878 0.864 0.990 0.978 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
27. C42C1.14 rpl-34 146539 7.557 0.980 0.967 0.924 0.967 0.869 0.872 0.986 0.992 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
28. F36A2.6 rps-15 147653 7.555 0.945 0.968 0.921 0.968 0.892 0.912 0.975 0.974 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
29. R11D1.8 rpl-28 62242 7.548 0.975 0.973 0.959 0.973 0.855 0.865 0.977 0.971 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
30. K04D7.1 rack-1 48949 7.545 0.971 0.970 0.974 0.970 0.822 0.873 0.980 0.985 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
31. F53G12.10 rpl-7 78552 7.543 0.981 0.961 0.932 0.961 0.877 0.879 0.967 0.985 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
32. D1007.12 rpl-24.1 73724 7.541 0.974 0.975 0.944 0.975 0.807 0.899 0.980 0.987 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
33. Y65B4BR.5 icd-2 58321 7.537 0.969 0.970 0.962 0.970 0.869 0.898 0.961 0.938 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
34. C53H9.1 rpl-27 59496 7.523 0.980 0.965 0.925 0.965 0.842 0.876 0.984 0.986 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
35. W09C5.6 rpl-31 156225 7.516 0.883 0.975 0.964 0.975 0.857 0.881 0.992 0.989 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
36. F10E7.7 rpl-33 81733 7.516 0.971 0.976 0.890 0.976 0.998 0.729 0.983 0.993 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
37. F17C11.9 eef-1G 37911 7.516 0.977 0.976 0.953 0.976 0.800 0.871 0.991 0.972 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
38. F25H2.11 tct-1 41796 7.515 0.975 0.964 0.930 0.964 0.835 0.934 0.935 0.978 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
39. Y57G11C.16 rps-18 76576 7.498 0.959 0.968 0.915 0.968 0.799 0.955 0.949 0.985 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
40. B0393.1 rps-0 89081 7.498 0.985 0.956 0.897 0.956 0.862 0.895 0.969 0.978 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
41. C14B9.7 rpl-21 118616 7.487 0.981 0.978 0.955 0.978 0.713 0.917 0.988 0.977 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
42. C56C10.8 icd-1 89788 7.483 0.963 0.951 0.953 0.951 0.886 0.871 0.963 0.945 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
43. F56E10.4 rps-27 162794 7.483 0.871 0.971 0.946 0.971 0.871 0.988 0.989 0.876 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
44. F37C12.11 rps-21 62646 7.481 0.966 0.956 0.936 0.956 0.851 0.859 0.984 0.973 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
45. F40F11.1 rps-11 152960 7.477 0.847 0.960 0.910 0.960 0.844 0.990 0.992 0.974 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
46. T08B2.9 fars-1 12650 7.477 0.948 0.952 0.945 0.952 0.841 0.897 0.981 0.961 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
47. F57B9.5 byn-1 58236 7.476 0.959 0.959 0.959 0.959 0.857 0.919 0.933 0.931 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
48. F28D1.7 rps-23 93860 7.47 0.990 0.979 0.958 0.979 0.891 0.690 0.992 0.991 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
49. C26F1.4 rps-30 77534 7.469 0.982 0.961 0.912 0.961 0.826 0.870 0.973 0.984 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
50. Y37E3.7 rla-1 55876 7.467 0.966 0.965 0.933 0.965 0.838 0.849 0.977 0.974 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
51. C27A2.2 rpl-22 63091 7.465 0.967 0.943 0.950 0.943 0.854 0.848 0.980 0.980 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
52. T22F3.4 rpl-11.1 68403 7.465 0.962 0.946 0.941 0.946 0.901 0.948 0.971 0.850 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
53. R151.3 rpl-6 89081 7.457 0.990 0.982 0.949 0.982 0.913 0.669 0.983 0.989 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
54. JC8.3 rpl-12 52728 7.451 0.970 0.969 0.932 0.969 0.816 0.830 0.980 0.985 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
55. C26D10.2 hel-1 28697 7.449 0.955 0.946 0.940 0.946 0.864 0.932 0.972 0.894 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
56. Y45F10D.12 rpl-18 104658 7.448 0.970 0.958 0.933 0.958 0.994 0.679 0.974 0.982 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
57. Y43B11AR.4 rps-4 76546 7.446 0.973 0.963 0.916 0.963 0.807 0.878 0.960 0.986 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
58. Y22D7AL.5 hsp-60 42542 7.446 0.962 0.936 0.939 0.936 0.856 0.907 0.962 0.948 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
59. F42C5.8 rps-8 171967 7.446 0.969 0.965 0.917 0.965 0.784 0.877 0.989 0.980 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
60. F25H2.5 ndk-1 176025 7.446 0.951 0.947 0.889 0.947 0.861 0.986 0.893 0.972 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
61. W08E3.3 ola-1 20885 7.443 0.967 0.962 0.968 0.962 0.803 0.908 0.935 0.938 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
62. D2013.7 eif-3.F 21004 7.443 0.946 0.953 0.933 0.953 0.816 0.916 0.956 0.970 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
63. F25H5.4 eef-2 34846 7.441 0.960 0.965 0.954 0.965 0.817 0.850 0.968 0.962 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
64. T24H7.1 phb-2 28775 7.439 0.973 0.958 0.918 0.958 0.848 0.901 0.937 0.946 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
65. K08F11.3 cif-1 10218 7.435 0.949 0.952 0.936 0.952 0.858 0.889 0.971 0.928 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
66. C49H3.11 rps-2 152343 7.434 0.981 0.967 0.853 0.967 0.842 0.856 0.989 0.979 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
67. Y39A1C.3 cey-4 50694 7.434 0.950 0.958 0.953 0.958 0.826 0.872 0.943 0.974 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
68. Y37E3.9 phb-1 29211 7.421 0.934 0.958 0.927 0.958 0.842 0.918 0.929 0.955 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
69. E04A4.7 cyc-2.1 233997 7.421 0.973 0.971 0.936 0.971 0.840 0.872 0.890 0.968 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
70. M01F1.2 rpl-16 99563 7.417 0.982 0.970 0.935 0.970 0.875 0.718 0.982 0.985 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
71. Y48G8AL.8 rpl-17 77686 7.414 0.968 0.958 0.932 0.958 0.988 0.674 0.961 0.975 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
72. T16G1.11 eif-3.K 14014 7.411 0.948 0.940 0.931 0.940 0.819 0.934 0.975 0.924 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
73. B0464.1 dars-1 12331 7.408 0.960 0.949 0.950 0.949 0.807 0.871 0.980 0.942 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
74. H06I04.4 ubl-1 57718 7.407 0.982 0.960 0.923 0.960 0.851 0.792 0.980 0.959 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
75. Y71A12B.1 rps-6 123721 7.406 0.972 0.972 0.934 0.972 0.682 0.903 0.988 0.983 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
76. H21P03.1 mbf-1 25586 7.405 0.948 0.941 0.955 0.941 0.777 0.934 0.941 0.968 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
77. Y18D10A.19 fkb-2 48128 7.405 0.966 0.950 0.931 0.950 0.877 0.823 0.982 0.926 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
78. H20J04.5 pfd-2 8082 7.401 0.951 0.938 0.940 0.938 0.851 0.910 0.947 0.926 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
79. F54C9.5 rpl-5 99313 7.4 0.980 0.966 0.938 0.966 0.668 0.907 0.982 0.993 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
80. Y18D10A.25 fkb-8 8968 7.398 0.937 0.938 0.929 0.938 0.842 0.962 0.950 0.902 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
81. Y75B12B.2 cyn-7 98281 7.398 0.970 0.973 0.952 0.973 0.797 0.887 0.908 0.938 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
82. F54H12.6 eef-1B.1 37095 7.396 0.937 0.948 0.937 0.948 0.817 0.862 0.964 0.983 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
83. Y41D4B.5 rps-28 46003 7.39 0.973 0.931 0.926 0.931 0.826 0.861 0.966 0.976 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
84. F26D10.3 hsp-1 98277 7.385 0.972 0.965 0.946 0.965 0.765 0.876 0.938 0.958 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
85. R13A5.8 rpl-9 140064 7.381 0.986 0.964 0.947 0.964 0.824 0.727 0.987 0.982 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
86. C23G10.3 rps-3 69779 7.38 0.965 0.962 0.918 0.962 0.844 0.788 0.983 0.958 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
87. T27F7.3 eif-1 28176 7.379 0.949 0.938 0.940 0.938 0.832 0.865 0.945 0.972 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
88. H06H21.3 eif-1.A 40990 7.378 0.960 0.964 0.950 0.964 0.801 0.867 0.930 0.942 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
89. B0205.7 kin-3 29775 7.377 0.954 0.954 0.952 0.954 0.803 0.884 0.919 0.957 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
90. B0513.3 rpl-29 102432 7.377 0.963 0.977 0.959 0.977 0.831 0.688 0.991 0.991 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
91. B0041.4 rpl-4 161951 7.376 0.969 0.959 0.941 0.959 0.717 0.866 0.978 0.987 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
92. Y40B1B.5 eif-3.J 15061 7.374 0.932 0.941 0.934 0.941 0.828 0.897 0.952 0.949 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
93. Y54G11A.10 lin-7 6552 7.374 0.927 0.913 0.933 0.913 0.879 0.883 0.954 0.972
94. T08B2.10 rps-17 38071 7.374 0.941 0.943 0.939 0.943 0.792 0.880 0.958 0.978 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
95. T23D8.4 eif-3.C 15343 7.367 0.943 0.952 0.963 0.952 0.758 0.931 0.947 0.921 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
96. T21C9.12 scpl-4 14723 7.366 0.962 0.951 0.948 0.951 0.823 0.863 0.944 0.924 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
97. T10B5.5 cct-7 24616 7.364 0.953 0.949 0.953 0.949 0.802 0.892 0.926 0.940 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
98. F18E2.2 abcf-1 4708 7.364 0.927 0.935 0.901 0.935 0.843 0.933 0.965 0.925 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_506192]
99. K04G2.1 iftb-1 12590 7.362 0.962 0.934 0.958 0.934 0.848 0.851 0.944 0.931 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
100. B0412.4 rps-29 35461 7.361 0.949 0.944 0.902 0.944 0.837 0.852 0.960 0.973 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA