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Results for B0041.4

Gene ID Gene Name Reads Transcripts Annotation
B0041.4 rpl-4 161951 B0041.4 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]

Genes with expression patterns similar to B0041.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0041.4 rpl-4 161951 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
2. C14B9.7 rpl-21 118616 7.769 0.987 0.959 0.979 0.959 0.994 0.932 0.976 0.983 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
3. Y71A12B.1 rps-6 123721 7.768 0.960 0.969 0.974 0.969 0.995 0.915 0.989 0.997 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
4. C42C1.14 rpl-34 146539 7.764 0.974 0.979 0.992 0.979 0.899 0.995 0.959 0.987 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
5. ZK652.4 rpl-35 89991 7.713 0.969 0.969 0.982 0.969 0.924 0.936 0.983 0.981 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
6. ZC434.2 rps-7 142021 7.685 0.978 0.964 0.984 0.964 0.907 0.912 0.980 0.996 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
7. Y71F9AL.13 rpl-1 143484 7.677 0.974 0.977 0.987 0.977 0.916 0.869 0.990 0.987 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
8. F56F3.5 rps-1 85503 7.674 0.980 0.969 0.983 0.969 0.858 0.946 0.977 0.992 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
9. M01F1.2 rpl-16 99563 7.673 0.974 0.976 0.983 0.976 0.921 0.875 0.978 0.990 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
10. C32E8.2 rpl-13 70096 7.655 0.970 0.963 0.977 0.963 0.898 0.933 0.977 0.974 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
11. R13A5.8 rpl-9 140064 7.649 0.977 0.977 0.979 0.977 0.871 0.898 0.978 0.992 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
12. F39B2.6 rps-26 137659 7.644 0.974 0.968 0.980 0.968 0.928 0.887 0.975 0.964 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
13. T05F1.3 rps-19 88407 7.641 0.965 0.957 0.981 0.957 0.864 0.947 0.983 0.987 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
14. B0393.1 rps-0 89081 7.641 0.965 0.961 0.973 0.961 0.896 0.920 0.974 0.991 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
15. F37C12.9 rps-14 106692 7.638 0.971 0.949 0.973 0.949 0.920 0.912 0.979 0.985 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
16. Y62E10A.1 rla-2 59665 7.636 0.935 0.958 0.965 0.958 0.906 0.962 0.977 0.975 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
17. D1007.6 rps-10 142465 7.631 0.979 0.966 0.973 0.966 0.923 0.877 0.967 0.980 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
18. F53A3.3 rps-22 81093 7.63 0.973 0.966 0.976 0.966 0.840 0.947 0.974 0.988 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
19. Y43B11AR.4 rps-4 76546 7.624 0.945 0.966 0.955 0.966 0.880 0.947 0.972 0.993 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
20. B0336.9 swp-1 52442 7.623 0.958 0.942 0.974 0.942 0.890 0.964 0.976 0.977 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
21. K04D7.1 rack-1 48949 7.61 0.949 0.948 0.963 0.948 0.914 0.930 0.968 0.990 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
22. C49H3.11 rps-2 152343 7.609 0.976 0.977 0.884 0.977 0.882 0.953 0.975 0.985 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
23. R151.3 rpl-6 89081 7.607 0.979 0.971 0.987 0.971 0.872 0.865 0.974 0.988 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
24. Y37E3.7 rla-1 55876 7.605 0.957 0.952 0.977 0.952 0.889 0.930 0.965 0.983 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
25. Y48B6A.2 rpl-43 104489 7.604 0.969 0.967 0.983 0.967 0.878 0.909 0.977 0.954 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
26. C09D4.5 rpl-19 56944 7.602 0.940 0.953 0.969 0.953 0.869 0.954 0.978 0.986 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
27. B0250.1 rpl-2 100592 7.6 0.973 0.967 0.974 0.967 0.929 0.846 0.963 0.981 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
28. F53G12.10 rpl-7 78552 7.599 0.954 0.975 0.959 0.975 0.871 0.946 0.945 0.974 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
29. C26F1.4 rps-30 77534 7.593 0.976 0.952 0.957 0.952 0.889 0.941 0.938 0.988 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
30. K04D7.2 mspn-1 48187 7.592 0.952 0.956 0.958 0.956 0.881 0.945 0.959 0.985 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
31. C53H9.1 rpl-27 59496 7.584 0.933 0.940 0.974 0.940 0.897 0.934 0.980 0.986 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
32. F42C5.8 rps-8 171967 7.583 0.969 0.979 0.977 0.979 0.853 0.870 0.989 0.967 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
33. T24B8.1 rpl-32 67285 7.583 0.941 0.969 0.977 0.969 0.895 0.883 0.961 0.988 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
34. T05E11.1 rps-5 79298 7.583 0.973 0.939 0.987 0.939 0.869 0.930 0.973 0.973 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
35. C27A2.2 rpl-22 63091 7.582 0.966 0.920 0.982 0.920 0.923 0.911 0.975 0.985 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
36. D1007.12 rpl-24.1 73724 7.58 0.965 0.933 0.978 0.933 0.871 0.950 0.971 0.979 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
37. Y24D9A.4 rpl-7A 176639 7.574 0.869 0.973 0.967 0.973 0.883 0.941 0.980 0.988 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
38. ZK1010.1 ubq-2 87842 7.572 0.970 0.960 0.975 0.960 0.866 0.917 0.945 0.979 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
39. R11D1.8 rpl-28 62242 7.571 0.948 0.950 0.979 0.950 0.862 0.947 0.968 0.967 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
40. F28D1.7 rps-23 93860 7.569 0.966 0.962 0.981 0.962 0.878 0.861 0.971 0.988 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
41. JC8.3 rpl-12 52728 7.567 0.951 0.947 0.961 0.947 0.875 0.916 0.979 0.991 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
42. F17C11.9 eef-1G 37911 7.563 0.962 0.957 0.954 0.957 0.832 0.949 0.977 0.975 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
43. H06I04.4 ubl-1 57718 7.551 0.979 0.947 0.964 0.947 0.879 0.913 0.958 0.964 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
44. C56C10.8 icd-1 89788 7.55 0.937 0.943 0.968 0.943 0.888 0.945 0.959 0.967 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
45. C23G10.3 rps-3 69779 7.55 0.962 0.971 0.969 0.971 0.857 0.897 0.964 0.959 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
46. F37C12.11 rps-21 62646 7.546 0.945 0.935 0.971 0.935 0.904 0.908 0.975 0.973 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
47. F25H5.4 eef-2 34846 7.545 0.933 0.941 0.963 0.941 0.866 0.968 0.967 0.966 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
48. Y41D4B.5 rps-28 46003 7.533 0.932 0.940 0.973 0.940 0.879 0.929 0.962 0.978 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
49. T24H7.1 phb-2 28775 7.53 0.937 0.970 0.946 0.970 0.850 0.970 0.929 0.958 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
50. Y57G11C.16 rps-18 76576 7.524 0.925 0.949 0.962 0.949 0.877 0.946 0.925 0.991 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
51. F13B10.2 rpl-3 171741 7.519 0.977 0.950 0.975 0.950 0.750 0.945 0.991 0.981 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
52. F25H2.10 rla-0 79986 7.516 0.953 0.970 0.962 0.970 0.890 0.824 0.968 0.979 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
53. F25H2.11 tct-1 41796 7.507 0.944 0.943 0.968 0.943 0.847 0.946 0.936 0.980 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
54. K02B2.5 rps-25 118421 7.498 0.962 0.944 0.982 0.944 0.757 0.931 0.989 0.989 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
55. T08B2.10 rps-17 38071 7.497 0.908 0.946 0.953 0.946 0.884 0.956 0.929 0.975 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
56. K11H12.2 rpl-15 96281 7.496 0.956 0.960 0.977 0.960 0.880 0.845 0.937 0.981 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
57. W09C5.6 rpl-31 156225 7.495 0.824 0.979 0.976 0.979 0.881 0.884 0.988 0.984 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
58. Y105E8A.16 rps-20 146067 7.494 0.973 0.967 0.988 0.967 0.751 0.906 0.954 0.988 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
59. B0412.4 rps-29 35461 7.493 0.907 0.944 0.952 0.944 0.862 0.948 0.960 0.976 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
60. F37C12.4 rpl-36 126906 7.491 0.954 0.956 0.965 0.956 0.876 0.865 0.954 0.965 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
61. F40F8.10 rps-9 105818 7.485 0.958 0.945 0.980 0.945 0.759 0.935 0.983 0.980 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
62. C09H10.2 rpl-41 94057 7.48 0.959 0.934 0.959 0.934 0.918 0.843 0.966 0.967 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
63. C16A3.9 rps-13 82192 7.479 0.969 0.940 0.967 0.940 0.898 0.817 0.959 0.989 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
64. B0513.3 rpl-29 102432 7.475 0.944 0.942 0.952 0.942 0.889 0.854 0.973 0.979 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
65. F26D10.3 hsp-1 98277 7.473 0.956 0.938 0.942 0.938 0.871 0.929 0.935 0.964 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
66. F54C9.5 rpl-5 99313 7.472 0.963 0.984 0.974 0.984 0.685 0.918 0.977 0.987 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
67. F40F11.1 rps-11 152960 7.47 0.802 0.968 0.980 0.968 0.905 0.902 0.978 0.967 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
68. Y22D7AL.5 hsp-60 42542 7.469 0.939 0.924 0.917 0.924 0.903 0.967 0.950 0.945 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
69. Y75B12B.2 cyn-7 98281 7.467 0.935 0.937 0.951 0.937 0.914 0.910 0.940 0.943 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
70. Y39A1C.3 cey-4 50694 7.463 0.912 0.956 0.961 0.956 0.806 0.957 0.935 0.980 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
71. Y106G6H.3 rpl-30 54860 7.453 0.898 0.965 0.908 0.965 0.859 0.940 0.943 0.975 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492728]
72. E04A4.7 cyc-2.1 233997 7.45 0.959 0.968 0.965 0.968 0.886 0.854 0.899 0.951 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
73. F28C6.7 rpl-26 113192 7.441 0.969 0.954 0.987 0.954 0.718 0.881 0.988 0.990 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
74. F54H12.6 eef-1B.1 37095 7.44 0.910 0.923 0.969 0.923 0.848 0.927 0.960 0.980 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
75. C37A2.8 C37A2.8 3887 7.439 0.976 0.857 0.977 0.857 0.888 0.924 0.977 0.983
76. C06B8.8 rpl-38 109834 7.433 0.958 0.978 0.985 0.978 0.662 0.931 0.964 0.977 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
77. Y37E3.10 Y37E3.10 6492 7.431 0.964 0.895 0.978 0.895 0.909 0.834 0.961 0.995
78. C26F1.9 rpl-39 51628 7.424 0.865 0.950 0.949 0.950 0.864 0.934 0.954 0.958 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
79. W10D9.5 tomm-22 7396 7.415 0.873 0.947 0.937 0.947 0.859 0.957 0.958 0.937 Translocase of Outer Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_493741]
80. D2096.8 nap-1 59459 7.411 0.930 0.937 0.950 0.937 0.890 0.964 0.915 0.888 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
81. Y40B1B.5 eif-3.J 15061 7.408 0.905 0.950 0.900 0.950 0.851 0.947 0.937 0.968 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
82. C54C6.1 rpl-37 24379 7.403 0.899 0.911 0.959 0.911 0.873 0.950 0.934 0.966 60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622]
83. F10E7.7 rpl-33 81733 7.394 0.949 0.968 0.933 0.968 0.723 0.886 0.978 0.989 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
84. F36A2.6 rps-15 147653 7.388 0.922 0.955 0.968 0.955 0.735 0.914 0.981 0.958 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
85. F31E3.5 eef-1A.1 224876 7.386 0.863 0.947 0.927 0.947 0.899 0.928 0.979 0.896 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
86. T13H5.5 mrps-18B 3430 7.382 0.919 0.943 0.920 0.943 0.847 0.966 0.950 0.894 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
87. C03D6.8 rpl-24.2 5932 7.379 0.943 0.934 0.913 0.934 0.836 0.969 0.940 0.910 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
88. F55H2.6 clu-1 21404 7.376 0.898 0.932 0.917 0.932 0.878 0.972 0.929 0.918 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
89. T01C3.6 rps-16 97002 7.376 0.969 0.959 0.941 0.959 0.717 0.866 0.978 0.987 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
90. R74.1 lars-1 8467 7.375 0.926 0.940 0.915 0.940 0.862 0.943 0.889 0.960 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
91. C07G2.3 cct-5 44703 7.374 0.903 0.944 0.918 0.944 0.875 0.960 0.910 0.920 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
92. T21C9.12 scpl-4 14723 7.369 0.920 0.937 0.950 0.937 0.820 0.962 0.920 0.923 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
93. Y18D10A.19 fkb-2 48128 7.367 0.931 0.917 0.926 0.917 0.823 0.946 0.961 0.946 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
94. T03D8.2 mrps-12 8253 7.367 0.881 0.911 0.942 0.911 0.912 0.962 0.935 0.913 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
95. Y106G6H.2 pab-1 96744 7.36 0.969 0.944 0.968 0.944 0.697 0.911 0.942 0.985 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
96. Y55F3AR.3 cct-8 17979 7.355 0.892 0.907 0.904 0.907 0.932 0.967 0.885 0.961 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
97. W08E3.3 ola-1 20885 7.353 0.934 0.920 0.905 0.920 0.839 0.972 0.919 0.944 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
98. Y45F10D.12 rpl-18 104658 7.353 0.970 0.948 0.970 0.948 0.702 0.868 0.959 0.988 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
99. F54A3.3 cct-3 25183 7.352 0.919 0.920 0.912 0.920 0.864 0.965 0.895 0.957 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
100. B0261.4 mrpl-47 8210 7.352 0.923 0.929 0.933 0.929 0.792 0.976 0.961 0.909 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA