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Results for ZK616.4

Gene ID Gene Name Reads Transcripts Annotation
ZK616.4 swsn-6 2791 ZK616.4.1, ZK616.4.2 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_500801]

Genes with expression patterns similar to ZK616.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK616.4 swsn-6 2791 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_500801]
2. C26E6.7 eri-9 8069 7.657 0.975 0.971 0.979 0.971 0.948 0.935 0.947 0.931 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
3. R06F6.1 cdl-1 14167 7.605 0.961 0.965 0.945 0.965 0.960 0.915 0.953 0.941 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
4. Y41D4B.13 ced-2 10100 7.603 0.972 0.958 0.934 0.958 0.981 0.890 0.931 0.979 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
5. B0240.4 npp-22 5510 7.601 0.951 0.972 0.946 0.972 0.968 0.913 0.935 0.944 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
6. M03C11.4 hat-1 3839 7.595 0.972 0.959 0.959 0.959 0.988 0.919 0.904 0.935 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
7. F53F10.5 npp-11 3378 7.587 0.957 0.954 0.954 0.954 0.955 0.932 0.939 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
8. F57B9.7 flap-1 5377 7.579 0.966 0.945 0.926 0.945 0.972 0.951 0.909 0.965 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
9. JC8.6 lin-54 5789 7.576 0.956 0.970 0.975 0.970 0.972 0.914 0.916 0.903
10. F25B3.6 rtfo-1 11965 7.572 0.973 0.949 0.937 0.949 0.975 0.954 0.937 0.898 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
11. F43G9.5 cfim-1 9169 7.57 0.924 0.965 0.943 0.965 0.973 0.924 0.916 0.960 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
12. Y47D3A.26 smc-3 6256 7.569 0.914 0.949 0.930 0.949 0.966 0.943 0.958 0.960 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
13. Y41D4B.19 npp-8 12992 7.567 0.973 0.951 0.927 0.951 0.977 0.918 0.953 0.917 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
14. T09A5.8 cec-3 5813 7.565 0.976 0.971 0.943 0.971 0.963 0.940 0.893 0.908 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
15. K04G2.2 aho-3 15189 7.563 0.972 0.960 0.953 0.960 0.948 0.899 0.944 0.927
16. F52C9.7 mog-3 9880 7.56 0.968 0.972 0.926 0.972 0.979 0.918 0.925 0.900 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
17. Y53C10A.12 hsf-1 7899 7.56 0.964 0.948 0.957 0.948 0.973 0.862 0.953 0.955 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
18. Y48G1A.5 xpo-2 11748 7.556 0.966 0.951 0.947 0.951 0.971 0.915 0.946 0.909 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
19. T05H4.14 gad-1 7979 7.553 0.968 0.954 0.942 0.954 0.973 0.947 0.903 0.912 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
20. W01A8.5 tofu-5 5678 7.549 0.973 0.959 0.961 0.959 0.954 0.864 0.942 0.937 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
21. K07A12.2 egg-6 18331 7.549 0.964 0.972 0.927 0.972 0.954 0.927 0.914 0.919 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
22. ZK742.1 xpo-1 20741 7.546 0.977 0.956 0.943 0.956 0.964 0.903 0.948 0.899 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
23. W06E11.4 sbds-1 6701 7.544 0.931 0.937 0.924 0.937 0.969 0.926 0.943 0.977 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
24. C25A1.4 C25A1.4 15507 7.543 0.929 0.941 0.959 0.941 0.979 0.940 0.953 0.901
25. F28B3.8 imb-1 7515 7.541 0.948 0.941 0.933 0.941 0.956 0.959 0.959 0.904 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
26. C10C5.6 daf-15 8724 7.54 0.952 0.972 0.967 0.972 0.957 0.907 0.899 0.914 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
27. Y37D8A.9 mrg-1 14369 7.54 0.968 0.947 0.936 0.947 0.967 0.909 0.950 0.916 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
28. K07A1.12 lin-53 15817 7.54 0.961 0.961 0.958 0.961 0.942 0.904 0.941 0.912 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
29. Y43F4B.3 set-25 8036 7.54 0.955 0.961 0.958 0.961 0.946 0.917 0.954 0.888 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
30. T26A5.7 set-1 6948 7.537 0.954 0.975 0.947 0.975 0.955 0.937 0.890 0.904 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
31. K08E7.1 eak-7 18960 7.534 0.950 0.970 0.945 0.970 0.968 0.877 0.914 0.940 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
32. C34E10.2 gop-2 5684 7.533 0.943 0.956 0.921 0.956 0.940 0.897 0.958 0.962 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
33. C36B1.7 dhfr-1 2900 7.527 0.952 0.954 0.941 0.954 0.962 0.868 0.940 0.956 Putative dihydrofolate reductase [Source:UniProtKB/Swiss-Prot;Acc:Q93341]
34. K11D12.2 pqn-51 15951 7.523 0.934 0.962 0.929 0.962 0.973 0.916 0.932 0.915 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
35. Y54E5A.4 npp-4 6288 7.523 0.926 0.970 0.926 0.970 0.954 0.944 0.939 0.894 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
36. K07A1.2 dut-1 5203 7.523 0.965 0.937 0.958 0.937 0.935 0.925 0.912 0.954 DeoxyUTPase [Source:RefSeq peptide;Acc:NP_001021553]
37. F43G6.9 patr-1 23000 7.523 0.971 0.957 0.957 0.957 0.947 0.859 0.941 0.934 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
38. F23F1.1 nfyc-1 9983 7.523 0.954 0.965 0.957 0.965 0.963 0.948 0.921 0.850 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
39. F32H2.1 snpc-4 7581 7.521 0.930 0.965 0.946 0.965 0.937 0.915 0.941 0.922 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
40. W02F12.6 sna-1 7338 7.521 0.957 0.968 0.962 0.968 0.977 0.890 0.928 0.871 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
41. T22C1.3 T22C1.3 2305 7.52 0.943 0.949 0.949 0.949 0.981 0.908 0.928 0.913
42. C36A4.5 maph-1.3 15493 7.52 0.961 0.934 0.948 0.934 0.968 0.860 0.933 0.982 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
43. R12C12.2 ran-5 14517 7.517 0.956 0.971 0.946 0.971 0.970 0.904 0.930 0.869 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
44. B0252.4 cyn-10 3765 7.516 0.968 0.958 0.920 0.958 0.980 0.936 0.936 0.860 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
45. F26B1.3 ima-2 18826 7.514 0.948 0.964 0.944 0.964 0.921 0.900 0.934 0.939 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
46. K02F3.11 rnp-5 6205 7.513 0.972 0.966 0.940 0.966 0.943 0.956 0.881 0.889 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
47. F10E9.8 sas-4 3703 7.513 0.944 0.956 0.956 0.956 0.951 0.912 0.909 0.929 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
48. F53A3.2 polh-1 2467 7.512 0.920 0.965 0.931 0.965 0.978 0.949 0.914 0.890 POLH (DNA polymerase eta) homolog [Source:RefSeq peptide;Acc:NP_497480]
49. F55G1.8 plk-3 12036 7.511 0.959 0.951 0.919 0.951 0.966 0.945 0.895 0.925 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
50. T23H2.1 npp-12 12425 7.51 0.930 0.958 0.952 0.958 0.941 0.915 0.927 0.929 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
51. F59A2.1 npp-9 34375 7.509 0.953 0.957 0.908 0.957 0.954 0.921 0.943 0.916 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
52. Y69A2AR.30 mdf-2 6403 7.507 0.972 0.944 0.961 0.944 0.938 0.903 0.937 0.908 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
53. B0035.3 B0035.3 4118 7.506 0.969 0.979 0.928 0.979 0.953 0.924 0.911 0.863
54. Y71G12B.9 lin-65 7476 7.505 0.949 0.947 0.937 0.947 0.957 0.920 0.954 0.894 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
55. K01G5.4 ran-1 32379 7.504 0.964 0.966 0.941 0.966 0.938 0.900 0.933 0.896 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
56. C07G1.3 pct-1 10635 7.502 0.973 0.981 0.956 0.981 0.954 0.924 0.936 0.797 Cyclin-dependent kinase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8I7M8]
57. Y42G9A.6 wht-7 2348 7.501 0.947 0.939 0.955 0.939 0.956 0.921 0.936 0.908 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_001040881]
58. R07E5.14 rnp-4 11659 7.501 0.949 0.944 0.928 0.944 0.976 0.907 0.942 0.911 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
59. R06A4.4 imb-2 10302 7.501 0.954 0.939 0.941 0.939 0.967 0.880 0.941 0.940 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
60. F32D1.10 mcm-7 21233 7.5 0.961 0.967 0.930 0.967 0.941 0.907 0.954 0.873 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
61. F53F4.3 tbcb-1 6442 7.5 0.937 0.963 0.932 0.963 0.973 0.879 0.900 0.953 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
62. F44G4.4 tdp-1 3335 7.5 0.964 0.951 0.915 0.951 0.924 0.917 0.918 0.960 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
63. Y46G5A.5 pisy-1 13040 7.5 0.943 0.955 0.940 0.955 0.967 0.909 0.954 0.877 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
64. F37A4.9 bath-41 2558 7.499 0.969 0.965 0.933 0.965 0.905 0.957 0.892 0.913 BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
65. F32A5.7 lsm-4 3785 7.499 0.950 0.955 0.918 0.955 0.956 0.934 0.942 0.889 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
66. T24H10.3 dnj-23 11446 7.497 0.966 0.969 0.964 0.969 0.949 0.891 0.894 0.895 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
67. W03G1.6 pig-1 5015 7.497 0.971 0.974 0.951 0.974 0.975 0.927 0.914 0.811 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
68. Y62E10A.11 mdt-9 5971 7.496 0.898 0.965 0.925 0.965 0.953 0.899 0.945 0.946 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
69. C55B7.1 glh-2 3622 7.495 0.972 0.943 0.933 0.943 0.937 0.906 0.915 0.946 ATP-dependent RNA helicase glh-2 [Source:UniProtKB/Swiss-Prot;Acc:Q966L9]
70. K07A1.11 rba-1 3421 7.494 0.942 0.951 0.923 0.951 0.964 0.894 0.933 0.936 Probable histone-binding protein rba-1 [Source:UniProtKB/Swiss-Prot;Acc:P90917]
71. ZK632.1 mcm-6 9164 7.494 0.922 0.960 0.960 0.960 0.945 0.920 0.922 0.905 DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
72. C08B11.5 sap-49 10553 7.49 0.927 0.963 0.900 0.963 0.951 0.943 0.917 0.926 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
73. T22C1.6 T22C1.6 4918 7.489 0.912 0.963 0.937 0.963 0.931 0.921 0.918 0.944
74. R08C7.10 wapl-1 4967 7.487 0.926 0.952 0.945 0.952 0.935 0.888 0.931 0.958 WAPL (Drosophila Wings APart-Like cohesin interactor) [Source:RefSeq peptide;Acc:NP_500567]
75. Y113G7B.5 fog-2 2753 7.487 0.959 0.950 0.910 0.950 0.951 0.919 0.928 0.920 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
76. F33H1.4 F33H1.4 2447 7.486 0.901 0.930 0.961 0.930 0.942 0.967 0.926 0.929
77. F14D2.13 bath-28 1965 7.483 0.922 0.931 0.941 0.931 0.975 0.932 0.947 0.904 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_871999]
78. F32H2.4 thoc-3 3861 7.483 0.942 0.953 0.941 0.953 0.955 0.953 0.878 0.908 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
79. C08B11.3 swsn-7 11608 7.483 0.969 0.970 0.946 0.970 0.944 0.866 0.944 0.874 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
80. F59G1.5 ptp-2 7879 7.481 0.958 0.968 0.912 0.968 0.946 0.913 0.861 0.955 Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
81. B0001.8 B0001.8 1978 7.481 0.980 0.953 0.954 0.953 0.940 0.873 0.929 0.899
82. Y43F4B.4 npp-18 4780 7.481 0.937 0.956 0.921 0.956 0.969 0.911 0.943 0.888 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
83. F26F4.11 rpb-8 7601 7.481 0.881 0.949 0.930 0.949 0.971 0.911 0.940 0.950 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
84. C37A2.4 cye-1 4158 7.48 0.947 0.959 0.926 0.959 0.944 0.915 0.911 0.919 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
85. Y38C9A.2 cgp-1 11756 7.479 0.949 0.971 0.912 0.971 0.923 0.884 0.916 0.953 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
86. Y73B6BL.33 hrpf-2 4443 7.478 0.954 0.918 0.923 0.918 0.959 0.951 0.935 0.920 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
87. F59E12.11 sam-4 8179 7.478 0.905 0.965 0.952 0.965 0.968 0.879 0.950 0.894
88. T14G10.6 tsp-12 10308 7.478 0.977 0.965 0.955 0.965 0.931 0.856 0.903 0.926 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
89. Y113G7B.24 sld-5 3037 7.478 0.886 0.973 0.943 0.973 0.939 0.901 0.935 0.928 DNA replication complex GINS protein SLD5 [Source:RefSeq peptide;Acc:NP_001256903]
90. F21D5.6 F21D5.6 1798 7.477 0.943 0.959 0.939 0.959 0.957 0.842 0.927 0.951
91. F58F6.4 rfc-2 2074 7.477 0.973 0.960 0.908 0.960 0.948 0.906 0.920 0.902 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
92. T21D12.3 pqbp-1.1 5755 7.476 0.949 0.951 0.937 0.951 0.927 0.928 0.934 0.899 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
93. C26D10.1 ran-3 11111 7.475 0.931 0.941 0.906 0.941 0.936 0.902 0.942 0.976 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
94. T26E3.3 par-6 8650 7.474 0.967 0.967 0.910 0.967 0.974 0.894 0.861 0.934 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
95. C38C10.2 slc-17.2 6819 7.474 0.962 0.957 0.934 0.957 0.947 0.850 0.941 0.926 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
96. F42A6.7 hrp-1 28201 7.472 0.947 0.960 0.922 0.960 0.955 0.896 0.944 0.888 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
97. F33H2.5 pole-1 3734 7.471 0.964 0.970 0.946 0.970 0.919 0.929 0.922 0.851 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
98. F59B2.6 zif-1 10453 7.471 0.942 0.950 0.935 0.950 0.922 0.903 0.939 0.930 Zinc finger-interacting factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P34482]
99. R11A5.2 nud-2 15326 7.471 0.962 0.967 0.954 0.967 0.948 0.901 0.940 0.832 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_492172]
100. ZK353.1 cyy-1 5745 7.468 0.955 0.935 0.911 0.935 0.974 0.904 0.930 0.924 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA