C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for M28.2

Gene ID Gene Name Reads Transcripts Annotation
M28.2 M28.2 0 M28.2

Genes with expression patterns similar to M28.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. M28.2 M28.2 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. Y38A8.3 ulp-2 7403 5.603 0.946 - 0.892 - 0.976 0.968 0.948 0.873 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
3. C27B7.1 spr-2 14958 5.601 0.904 - 0.871 - 0.972 0.987 0.935 0.932 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
4. ZK328.2 eftu-2 7040 5.581 0.913 - 0.889 - 0.964 0.945 0.958 0.912 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
5. Y71G12B.17 Y71G12B.17 2904 5.581 0.952 - 0.909 - 0.981 0.965 0.877 0.897
6. F32E10.6 cec-5 10643 5.572 0.906 - 0.909 - 0.960 0.955 0.955 0.887 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
7. C06A5.1 inst-1 5068 5.572 0.930 - 0.865 - 0.971 0.976 0.929 0.901 INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
8. W01G7.3 rpb-11 7826 5.569 0.894 - 0.882 - 0.974 0.964 0.913 0.942 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
9. F10B5.6 emb-27 2578 5.567 0.942 - 0.906 - 0.959 0.905 0.930 0.925 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
10. Y110A7A.19 let-630 3830 5.564 0.941 - 0.921 - 0.980 0.916 0.917 0.889
11. K07C5.9 K07C5.9 266 5.564 0.908 - 0.923 - 0.960 0.946 0.912 0.915
12. B0035.3 B0035.3 4118 5.563 0.901 - 0.869 - 0.969 0.983 0.944 0.897
13. T10F2.4 prp-19 11298 5.562 0.918 - 0.898 - 0.979 0.947 0.917 0.903 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
14. ZK686.4 snu-23 9040 5.56 0.935 - 0.861 - 0.978 0.966 0.928 0.892 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
15. W02B12.3 rsp-1 9235 5.56 0.926 - 0.898 - 0.958 0.946 0.941 0.891 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
16. F32H2.4 thoc-3 3861 5.559 0.913 - 0.863 - 0.977 0.981 0.914 0.911 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
17. C23G10.10 C23G10.10 0 5.556 0.924 - 0.876 - 0.966 0.968 0.947 0.875
18. M05D6.3 M05D6.3 556 5.556 0.909 - 0.891 - 0.960 0.969 0.966 0.861
19. F23F1.1 nfyc-1 9983 5.552 0.936 - 0.886 - 0.966 0.937 0.908 0.919 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
20. K09H11.1 K09H11.1 1832 5.552 0.916 - 0.881 - 0.972 0.961 0.920 0.902
21. W04A4.6 W04A4.6 0 5.551 0.905 - 0.906 - 0.963 0.945 0.927 0.905
22. F54C1.1 F54C1.1 0 5.55 0.910 - 0.907 - 0.962 0.957 0.927 0.887
23. C26E6.4 rpb-2 7053 5.548 0.905 - 0.876 - 0.961 0.960 0.928 0.918 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
24. Y46G5A.4 snrp-200 13827 5.543 0.893 - 0.892 - 0.964 0.944 0.935 0.915 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
25. E01A2.4 let-504 9788 5.542 0.894 - 0.916 - 0.963 0.927 0.921 0.921
26. B0495.6 moa-2 6366 5.541 0.891 - 0.898 - 0.979 0.948 0.904 0.921
27. F49E8.1 nprl-2 1851 5.541 0.877 - 0.843 - 0.964 0.974 0.944 0.939 LOW QUALITY PROTEIN: Nitrogen Permease Regulator Like homolog [Source:RefSeq peptide;Acc:NP_001294159]
28. F29C4.6 tut-1 5637 5.537 0.895 - 0.864 - 0.977 0.975 0.939 0.887 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
29. Y37A1B.1 lst-3 10739 5.536 0.889 - 0.906 - 0.956 0.932 0.945 0.908 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
30. Y34D9A.1 mrpl-38 5291 5.535 0.884 - 0.888 - 0.963 0.949 0.942 0.909 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
31. F28B3.7 him-1 18274 5.531 0.919 - 0.893 - 0.946 0.954 0.941 0.878 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
32. T27A10.2 T27A10.2 0 5.53 0.907 - 0.874 - 0.976 0.958 0.914 0.901
33. Y65B4BL.2 deps-1 18277 5.53 0.903 - 0.881 - 0.962 0.956 0.937 0.891
34. C02B10.5 C02B10.5 9171 5.529 0.910 - 0.872 - 0.940 0.969 0.930 0.908
35. F56D2.6 ddx-15 12282 5.529 0.903 - 0.872 - 0.956 0.938 0.950 0.910 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
36. T23H2.1 npp-12 12425 5.528 0.940 - 0.876 - 0.962 0.958 0.921 0.871 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
37. C34E10.5 prmt-5 12277 5.528 0.930 - 0.909 - 0.959 0.959 0.921 0.850 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
38. R144.7 larp-1 24669 5.527 0.912 - 0.874 - 0.964 0.935 0.947 0.895 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
39. B0464.7 baf-1 10161 5.526 0.904 - 0.888 - 0.970 0.937 0.939 0.888 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
40. C07A9.5 C07A9.5 0 5.525 0.901 - 0.884 - 0.964 0.926 0.916 0.934 Uncharacterized calcium-binding protein C07A9.5 [Source:UniProtKB/Swiss-Prot;Acc:P34316]
41. R12C12.2 ran-5 14517 5.525 0.908 - 0.902 - 0.952 0.983 0.908 0.872 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
42. Y110A7A.8 prp-31 4436 5.525 0.914 - 0.896 - 0.970 0.967 0.875 0.903 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
43. T19B4.2 npp-7 13073 5.524 0.948 - 0.863 - 0.972 0.983 0.870 0.888 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
44. F54D5.3 F54D5.3 19486 5.523 0.922 - 0.900 - 0.959 0.905 0.919 0.918
45. C25D7.8 otub-1 7941 5.523 0.921 - 0.891 - 0.966 0.948 0.940 0.857 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
46. C18F10.2 C18F10.2 307 5.523 0.924 - 0.876 - 0.962 0.944 0.905 0.912
47. F58D5.1 hrp-2 17211 5.522 0.909 - 0.867 - 0.971 0.947 0.920 0.908 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
48. F52C9.7 mog-3 9880 5.522 0.898 - 0.895 - 0.954 0.961 0.939 0.875 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
49. K04C2.4 brd-1 2439 5.522 0.897 - 0.894 - 0.967 0.897 0.943 0.924 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
50. M01G5.3 M01G5.3 1834 5.522 0.889 - 0.910 - 0.978 0.918 0.929 0.898
51. C16C10.6 ccdc-55 3581 5.522 0.910 - 0.857 - 0.957 0.944 0.948 0.906 Nuclear speckle splicing regulatory protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09252]
52. C30B5.6 C30B5.6 0 5.52 0.868 - 0.880 - 0.961 0.951 0.927 0.933
53. F26B1.5 F26B1.5 212 5.519 0.927 - 0.863 - 0.976 0.952 0.929 0.872 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_001040654]
54. Y73F8A.34 tag-349 7966 5.519 0.905 - 0.870 - 0.973 0.935 0.926 0.910
55. F22D6.3 nars-1 18624 5.518 0.910 - 0.905 - 0.971 0.965 0.893 0.874 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
56. R13F6.10 cra-1 11610 5.516 0.917 - 0.880 - 0.976 0.943 0.907 0.893 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
57. F56D12.5 vig-1 42594 5.516 0.882 - 0.876 - 0.971 0.928 0.933 0.926 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
58. Y54E5A.4 npp-4 6288 5.516 0.922 - 0.851 - 0.961 0.968 0.899 0.915 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
59. C08B11.5 sap-49 10553 5.515 0.898 - 0.873 - 0.973 0.962 0.923 0.886 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
60. T11G6.7 T11G6.7 0 5.515 0.910 - 0.868 - 0.960 0.962 0.928 0.887
61. F32A5.7 lsm-4 3785 5.515 0.898 - 0.871 - 0.986 0.939 0.907 0.914 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
62. T06A10.4 lsy-13 7631 5.514 0.913 - 0.897 - 0.977 0.974 0.869 0.884
63. F45H11.3 hpo-35 8299 5.511 0.927 - 0.919 - 0.952 0.920 0.897 0.896
64. Y39G10AR.7 ekl-7 7072 5.511 0.940 - 0.872 - 0.980 0.944 0.864 0.911
65. ZK1010.4 ZK1010.4 0 5.51 0.891 - 0.904 - 0.968 0.970 0.900 0.877
66. T10C6.4 srx-44 8454 5.51 0.922 - 0.883 - 0.947 0.961 0.922 0.875 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
67. F13H8.3 F13H8.3 3796 5.509 0.916 - 0.905 - 0.955 0.928 0.937 0.868
68. K08F11.3 cif-1 10218 5.508 0.919 - 0.885 - 0.968 0.936 0.924 0.876 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
69. C01G10.9 C01G10.9 0 5.508 0.897 - 0.858 - 0.969 0.966 0.918 0.900 Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q93169]
70. Y37E3.15 npp-13 7250 5.508 0.899 - 0.872 - 0.942 0.955 0.919 0.921 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
71. Y25C1A.13 Y25C1A.13 2096 5.507 0.904 - 0.869 - 0.974 0.966 0.931 0.863
72. F54C4.1 mrpl-40 2843 5.507 0.910 - 0.883 - 0.957 0.971 0.931 0.855 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497138]
73. T12E12.2 cec-6 4758 5.506 0.908 - 0.915 - 0.987 0.956 0.859 0.881 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
74. C50F2.4 C50F2.4 4084 5.506 0.935 - 0.853 - 0.977 0.940 0.942 0.859
75. Y18D10A.1 attf-6 6942 5.505 0.859 - 0.916 - 0.978 0.936 0.911 0.905 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
76. F49D11.1 prp-17 5338 5.503 0.935 - 0.885 - 0.944 0.962 0.924 0.853 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
77. ZK809.8 ZK809.8 43343 5.503 0.895 - 0.904 - 0.921 0.960 0.953 0.870
78. F36A2.1 cids-2 4551 5.502 0.918 - 0.892 - 0.960 0.957 0.920 0.855 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
79. C46A5.9 hcf-1 6295 5.502 0.943 - 0.843 - 0.962 0.958 0.878 0.918 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
80. M03F8.5 M03F8.5 0 5.501 0.901 - 0.914 - 0.970 0.944 0.915 0.857
81. T04A8.14 emb-5 11746 5.501 0.913 - 0.888 - 0.959 0.959 0.924 0.858 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
82. Y102A5A.1 cand-1 11808 5.5 0.925 - 0.894 - 0.957 0.941 0.905 0.878 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
83. R09B3.4 ubc-12 7667 5.5 0.913 - 0.840 - 0.950 0.976 0.933 0.888 NEDD8-conjugating enzyme ubc-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVK5]
84. F33D4.5 mrpl-1 5337 5.499 0.878 - 0.852 - 0.961 0.972 0.941 0.895 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
85. Y47D3A.31 Y47D3A.31 3677 5.499 0.880 - 0.853 - 0.971 0.941 0.950 0.904
86. C18H9.5 C18H9.5 0 5.498 0.934 - 0.827 - 0.955 0.947 0.915 0.920
87. F32H2.1 snpc-4 7581 5.498 0.915 - 0.873 - 0.958 0.933 0.922 0.897 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
88. F10G8.3 rae-1 7542 5.496 0.924 - 0.890 - 0.971 0.955 0.923 0.833 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
89. C17H12.3 C17H12.3 1363 5.496 0.903 - 0.904 - 0.966 0.962 0.932 0.829 Protein-tyrosine-phosphatase [Source:RefSeq peptide;Acc:NP_501041]
90. T14B4.3 T14B4.3 2875 5.496 0.875 - 0.883 - 0.969 0.937 0.927 0.905
91. F54A3.5 F54A3.5 12028 5.495 0.893 - 0.839 - 0.959 0.958 0.932 0.914 MICOS complex subunit Mic10 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4K0]
92. C05D11.3 txdc-9 4903 5.494 0.907 - 0.844 - 0.949 0.963 0.933 0.898 Thioredoxin domain-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q11183]
93. ZK856.12 hpo-40 7855 5.493 0.903 - 0.881 - 0.965 0.933 0.903 0.908
94. Y47G6A.8 crn-1 3494 5.492 0.870 - 0.838 - 0.973 0.965 0.930 0.916 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
95. F26F4.10 rars-1 9971 5.492 0.923 - 0.881 - 0.963 0.941 0.907 0.877 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
96. T16G1.11 eif-3.K 14014 5.492 0.900 - 0.874 - 0.956 0.947 0.941 0.874 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
97. Y65B4BL.4 Y65B4BL.4 0 5.491 0.915 - 0.894 - 0.956 0.954 0.863 0.909
98. F58G1.3 F58G1.3 1826 5.491 0.941 - 0.890 - 0.974 0.932 0.876 0.878 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_496754]
99. C27H5.3 fust-1 6978 5.49 0.894 - 0.894 - 0.951 0.971 0.856 0.924 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
100. C26D10.2 hel-1 28697 5.489 0.889 - 0.884 - 0.953 0.938 0.909 0.916 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]

There are 951 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA