C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F56G4.6

Gene ID Gene Name Reads Transcripts Annotation
F56G4.6 F56G4.6 626 F56G4.6

Genes with expression patterns similar to F56G4.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56G4.6 F56G4.6 626 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. F56D1.7 daz-1 23684 7.46 0.954 0.897 0.940 0.897 0.953 0.942 0.947 0.930 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
3. C08B11.6 arp-6 4646 7.451 0.961 0.882 0.929 0.882 0.954 0.946 0.942 0.955 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
4. C18E3.6 cas-2 3048 7.433 0.891 0.918 0.934 0.918 0.974 0.953 0.888 0.957 Adenylyl cyclase-associated protein [Source:RefSeq peptide;Acc:NP_001293294]
5. F18E2.3 scc-3 13464 7.425 0.966 0.856 0.931 0.856 0.962 0.963 0.945 0.946 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
6. C16C10.8 C16C10.8 4044 7.41 0.943 0.890 0.943 0.890 0.947 0.982 0.878 0.937
7. ZK1127.4 ZK1127.4 3088 7.409 0.934 0.898 0.898 0.898 0.940 0.949 0.932 0.960 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
8. F44A2.1 tag-153 16535 7.408 0.959 0.868 0.914 0.868 0.974 0.940 0.939 0.946
9. C47D12.8 xpf-1 6173 7.407 0.957 0.831 0.938 0.831 0.967 0.969 0.946 0.968 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
10. B0205.1 B0205.1 2403 7.406 0.943 0.868 0.969 0.868 0.936 0.971 0.909 0.942
11. C26E6.5 fsn-1 6615 7.403 0.961 0.837 0.935 0.837 0.978 0.961 0.916 0.978 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
12. T05F1.6 hsr-9 13312 7.401 0.949 0.868 0.932 0.868 0.932 0.945 0.949 0.958
13. C07G1.4 wsp-1 11226 7.401 0.956 0.876 0.942 0.876 0.937 0.937 0.914 0.963 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
14. F38A5.13 dnj-11 19678 7.399 0.932 0.901 0.924 0.901 0.959 0.932 0.912 0.938 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
15. F20D12.1 csr-1 16351 7.397 0.905 0.885 0.907 0.885 0.964 0.952 0.931 0.968 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
16. Y54G9A.6 bub-3 9123 7.396 0.953 0.860 0.938 0.860 0.966 0.978 0.898 0.943 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
17. W03F9.5 ttb-1 8682 7.395 0.949 0.880 0.925 0.880 0.951 0.954 0.931 0.925 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
18. C34B2.6 C34B2.6 7529 7.393 0.938 0.883 0.905 0.883 0.978 0.942 0.950 0.914 Lon protease homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O44952]
19. F12F6.3 rib-1 10524 7.39 0.927 0.870 0.941 0.870 0.951 0.949 0.933 0.949 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
20. C38D4.3 mel-28 3515 7.389 0.910 0.860 0.948 0.860 0.965 0.973 0.931 0.942
21. E01A2.4 let-504 9788 7.388 0.965 0.878 0.919 0.878 0.936 0.938 0.914 0.960
22. F48E8.6 disl-2 8774 7.386 0.944 0.902 0.930 0.902 0.956 0.947 0.902 0.903 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
23. T23B12.7 dnj-22 2874 7.377 0.927 0.887 0.934 0.887 0.898 0.967 0.912 0.965 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_505178]
24. F41E6.4 smk-1 22394 7.369 0.942 0.857 0.950 0.857 0.963 0.938 0.933 0.929 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
25. Y53H1A.5 nfya-2 4166 7.368 0.947 0.855 0.933 0.855 0.965 0.920 0.935 0.958 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
26. K07C5.8 cash-1 10523 7.365 0.974 0.823 0.938 0.823 0.982 0.963 0.922 0.940 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
27. Y48B6A.14 hmg-1.1 88723 7.365 0.963 0.842 0.924 0.842 0.971 0.972 0.939 0.912 HMG [Source:RefSeq peptide;Acc:NP_496970]
28. F37A4.8 isw-1 9337 7.364 0.968 0.845 0.947 0.845 0.963 0.967 0.898 0.931 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
29. ZK328.5 npp-10 7652 7.361 0.928 0.887 0.912 0.887 0.935 0.969 0.903 0.940 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
30. EEED8.7 rsp-4 13043 7.361 0.949 0.866 0.891 0.866 0.960 0.958 0.944 0.927 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
31. C54G10.2 rfc-1 8814 7.361 0.939 0.873 0.928 0.873 0.956 0.930 0.918 0.944 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
32. F39H11.5 pbs-7 13631 7.355 0.922 0.894 0.928 0.894 0.955 0.932 0.887 0.943 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
33. Y92C3B.2 uaf-1 14981 7.355 0.956 0.887 0.881 0.887 0.960 0.959 0.900 0.925 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
34. F46F11.10 F46F11.10 968 7.354 0.928 0.840 0.941 0.840 0.939 0.963 0.951 0.952
35. T10C6.4 srx-44 8454 7.353 0.944 0.870 0.955 0.870 0.941 0.924 0.900 0.949 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
36. F28B3.7 him-1 18274 7.348 0.948 0.880 0.938 0.880 0.955 0.904 0.940 0.903 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
37. Y40B10A.1 lbp-9 30119 7.346 0.957 0.899 0.916 0.899 0.950 0.942 0.886 0.897 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
38. Y55D9A.1 efa-6 10012 7.346 0.919 0.840 0.940 0.840 0.968 0.943 0.929 0.967 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
39. T12D8.3 acbp-5 6816 7.345 0.944 0.850 0.927 0.850 0.923 0.956 0.932 0.963 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
40. W05B10.1 his-74 21926 7.344 0.962 0.892 0.902 0.892 0.965 0.938 0.916 0.877 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
41. ZK856.12 hpo-40 7855 7.343 0.960 0.913 0.912 0.913 0.931 0.892 0.935 0.887
42. R119.4 pqn-59 16065 7.343 0.966 0.856 0.912 0.856 0.956 0.921 0.919 0.957 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
43. C36B1.8 gls-1 8617 7.342 0.956 0.868 0.923 0.868 0.952 0.921 0.937 0.917 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
44. Y71H2AM.19 laf-1 9160 7.342 0.910 0.927 0.827 0.927 0.951 0.934 0.889 0.977 Putative DEAD-box RNA helicase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D0PV95]
45. C08C3.4 cyk-7 12075 7.341 0.964 0.876 0.910 0.876 0.953 0.963 0.876 0.923 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
46. T01G9.4 npp-2 5361 7.34 0.937 0.836 0.925 0.836 0.976 0.955 0.925 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
47. C05C8.4 gei-6 6026 7.339 0.917 0.857 0.939 0.857 0.932 0.952 0.908 0.977 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
48. R11A8.7 R11A8.7 15531 7.337 0.942 0.826 0.947 0.826 0.972 0.952 0.941 0.931 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
49. Y48G8AL.6 smg-2 12561 7.336 0.922 0.880 0.933 0.880 0.955 0.917 0.913 0.936 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
50. F59B2.7 rab-6.1 10749 7.335 0.940 0.854 0.922 0.854 0.945 0.969 0.906 0.945 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
51. F43G9.10 mfap-1 9205 7.335 0.886 0.853 0.940 0.853 0.968 0.944 0.932 0.959 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
52. Y39G10AL.3 cdk-7 3495 7.335 0.943 0.855 0.933 0.855 0.942 0.960 0.910 0.937 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
53. C33H5.6 swd-2.1 2044 7.333 0.905 0.861 0.919 0.861 0.964 0.953 0.926 0.944 Set1 WD40 repeat protein homolog [Source:RefSeq peptide;Acc:NP_501281]
54. Y67D8C.5 eel-1 30623 7.333 0.926 0.895 0.894 0.895 0.951 0.918 0.931 0.923 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
55. Y23H5A.7 cars-1 4455 7.332 0.940 0.895 0.867 0.895 0.966 0.948 0.943 0.878 Cysteinyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001293288]
56. T20H4.4 adr-2 5495 7.326 0.946 0.846 0.935 0.846 0.953 0.964 0.922 0.914 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
57. M106.1 mix-1 7950 7.326 0.917 0.840 0.957 0.840 0.976 0.935 0.895 0.966 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
58. F58A4.8 tbg-1 2839 7.321 0.958 0.889 0.906 0.889 0.938 0.936 0.923 0.882 Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
59. F08D12.1 srpa-72 9890 7.32 0.953 0.844 0.936 0.844 0.978 0.932 0.939 0.894 Signal recognition particle subunit SRP72 [Source:UniProtKB/Swiss-Prot;Acc:P91240]
60. F55B12.3 sel-10 10304 7.319 0.953 0.843 0.928 0.843 0.959 0.936 0.921 0.936 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
61. Y47G6A.11 msh-6 2767 7.319 0.929 0.866 0.953 0.866 0.947 0.916 0.912 0.930 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491163]
62. T21E12.4 dhc-1 20370 7.318 0.973 0.877 0.931 0.877 0.953 0.937 0.873 0.897 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
63. F08H9.1 coh-3 2202 7.318 0.885 0.887 0.890 0.887 0.942 0.958 0.935 0.934 COHesin family [Source:RefSeq peptide;Acc:NP_506583]
64. H06H21.6 ubxn-6 9202 7.317 0.975 0.820 0.954 0.820 0.952 0.956 0.917 0.923 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
65. F35G12.8 smc-4 6202 7.315 0.961 0.851 0.935 0.851 0.949 0.930 0.880 0.958 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
66. T08B2.11 T08B2.11 969 7.315 0.960 0.819 0.938 0.819 0.948 0.957 0.939 0.935
67. F56A3.3 npp-6 5425 7.314 0.955 0.854 0.925 0.854 0.904 0.940 0.948 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
68. Y43C5A.6 rad-51 5327 7.31 0.970 0.896 0.931 0.896 0.942 0.899 0.880 0.896 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
69. T10F2.3 ulp-1 8351 7.309 0.965 0.807 0.902 0.807 0.962 0.973 0.949 0.944 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
70. F23F1.8 rpt-4 14303 7.309 0.957 0.874 0.943 0.874 0.941 0.936 0.851 0.933 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
71. T20G5.11 rde-4 3966 7.308 0.958 0.825 0.942 0.825 0.918 0.951 0.948 0.941 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
72. T05G5.3 cdk-1 14112 7.306 0.950 0.843 0.945 0.843 0.931 0.953 0.919 0.922 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
73. Y110A7A.8 prp-31 4436 7.306 0.961 0.857 0.928 0.857 0.923 0.924 0.920 0.936 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
74. T10H9.3 syx-18 2416 7.306 0.956 0.861 0.894 0.861 0.959 0.959 0.917 0.899 SYntaXin [Source:RefSeq peptide;Acc:NP_504687]
75. Y105E8A.17 ekl-4 4732 7.305 0.949 0.886 0.897 0.886 0.952 0.915 0.909 0.911
76. M03C11.7 prp-3 2952 7.304 0.855 0.924 0.904 0.924 0.923 0.888 0.930 0.956 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_499300]
77. T23G11.7 T23G11.7 10001 7.303 0.919 0.839 0.927 0.839 0.970 0.927 0.933 0.949
78. ZC404.9 gck-2 8382 7.302 0.941 0.860 0.937 0.860 0.974 0.963 0.854 0.913 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
79. C02B10.2 snpn-1 5519 7.301 0.912 0.844 0.908 0.844 0.983 0.970 0.912 0.928 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
80. C48E7.3 lpd-2 10330 7.301 0.934 0.869 0.927 0.869 0.960 0.912 0.920 0.910 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
81. R10H10.1 lpd-8 4272 7.3 0.948 0.841 0.899 0.841 0.949 0.967 0.930 0.925 LiPid Depleted [Source:RefSeq peptide;Acc:NP_501917]
82. R01H2.6 ubc-18 13394 7.299 0.959 0.824 0.928 0.824 0.944 0.971 0.911 0.938 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
83. F55G1.4 rod-1 1885 7.299 0.907 0.869 0.932 0.869 0.951 0.921 0.925 0.925 ROD (Drosophila RoughDeal) homolog [Source:RefSeq peptide;Acc:NP_501200]
84. W01B6.9 ndc-80 4670 7.299 0.949 0.805 0.915 0.805 0.951 0.965 0.952 0.957 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
85. B0464.5 spk-1 35112 7.298 0.975 0.889 0.913 0.889 0.954 0.928 0.882 0.868 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
86. Y66D12A.9 Y66D12A.9 4029 7.298 0.959 0.866 0.938 0.866 0.977 0.930 0.854 0.908
87. F45H11.3 hpo-35 8299 7.295 0.910 0.868 0.882 0.868 0.962 0.952 0.937 0.916
88. K08D10.12 tsen-34 2644 7.295 0.872 0.894 0.900 0.894 0.954 0.938 0.923 0.920 Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_741368]
89. F20C5.1 parg-1 2633 7.295 0.941 0.850 0.871 0.850 0.973 0.950 0.912 0.948 Poly(ADP-ribose) glycohydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q867X0]
90. C39E9.12 C39E9.12 3588 7.294 0.974 0.783 0.937 0.783 0.978 0.972 0.926 0.941
91. R12B2.4 him-10 1767 7.291 0.960 0.828 0.906 0.828 0.956 0.930 0.948 0.935 Kinetochore protein Nuf2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21952]
92. ZC395.8 ztf-8 5521 7.291 0.912 0.852 0.925 0.852 0.951 0.948 0.915 0.936 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
93. C13B4.2 usp-14 9000 7.29 0.960 0.858 0.902 0.858 0.967 0.933 0.889 0.923 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
94. B0348.6 ife-3 26859 7.29 0.941 0.841 0.924 0.841 0.968 0.961 0.900 0.914 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
95. K06H7.9 idi-1 3291 7.29 0.949 0.856 0.851 0.856 0.967 0.917 0.946 0.948 Isopentenyl Diphosphate Isomerase [Source:RefSeq peptide;Acc:NP_498766]
96. B0432.2 djr-1.1 8628 7.289 0.871 0.889 0.875 0.889 0.967 0.975 0.870 0.953 Glutathione-independent glyoxalase DJR-1.1 [Source:UniProtKB/Swiss-Prot;Acc:P90994]
97. ZK1320.12 taf-8 3558 7.288 0.936 0.884 0.954 0.884 0.905 0.873 0.911 0.941 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
98. T06D10.2 chaf-1 8121 7.286 0.946 0.800 0.933 0.800 0.961 0.952 0.948 0.946 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
99. Y71G12B.1 chaf-2 3451 7.286 0.970 0.825 0.938 0.825 0.925 0.906 0.953 0.944 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
100. T20B12.2 tbp-1 9014 7.286 0.947 0.821 0.913 0.821 0.965 0.984 0.888 0.947 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]

There are 922 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA