C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F55F8.7

Gene ID Gene Name Reads Transcripts Annotation
F55F8.7 F55F8.7 1907 F55F8.7 Protein-tyrosine-phosphatase [Source:RefSeq peptide;Acc:NP_491657]

Genes with expression patterns similar to F55F8.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F55F8.7 F55F8.7 1907 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000 Protein-tyrosine-phosphatase [Source:RefSeq peptide;Acc:NP_491657]
2. C15H11.9 rrbs-1 9177 5.769 0.962 - 0.972 - 0.950 0.963 0.961 0.961 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
3. C25A1.10 dao-5 18351 5.764 0.958 - 0.942 - 0.968 0.994 0.965 0.937 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
4. T28D9.10 snr-3 9995 5.755 0.932 - 0.975 - 0.928 0.985 0.972 0.963 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
5. K04C2.3 K04C2.3 23540 5.753 0.955 - 0.955 - 0.955 0.969 0.978 0.941
6. C44E4.5 C44E4.5 919 5.74 0.907 - 0.968 - 0.960 0.987 0.961 0.957
7. R13A5.12 lpd-7 10476 5.739 0.944 - 0.943 - 0.956 0.977 0.961 0.958 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
8. Y23H5B.7 Y23H5B.7 0 5.734 0.953 - 0.928 - 0.928 0.978 0.980 0.967
9. K08F4.2 gtbp-1 25222 5.732 0.944 - 0.937 - 0.949 0.991 0.967 0.944 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
10. T19A6.2 ngp-1 5884 5.732 0.965 - 0.934 - 0.967 0.984 0.933 0.949 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
11. T03D8.2 mrps-12 8253 5.729 0.947 - 0.954 - 0.952 0.967 0.957 0.952 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
12. F52D1.2 F52D1.2 0 5.729 0.960 - 0.944 - 0.969 0.969 0.942 0.945
13. Y48A6B.7 Y48A6B.7 2873 5.725 0.959 - 0.953 - 0.960 0.979 0.942 0.932
14. Y48B6A.5 Y48B6A.5 3268 5.722 0.943 - 0.939 - 0.953 0.954 0.969 0.964 Major sperm protein [Source:RefSeq peptide;Acc:NP_496960]
15. C25A1.17 C25A1.17 0 5.72 0.924 - 0.962 - 0.959 0.987 0.959 0.929
16. Y66H1A.5 Y66H1A.5 2821 5.72 0.956 - 0.953 - 0.959 0.983 0.952 0.917
17. F53F4.12 F53F4.12 2683 5.711 0.952 - 0.947 - 0.976 0.977 0.948 0.911
18. T10B5.4 T10B5.4 0 5.711 0.953 - 0.964 - 0.963 0.962 0.963 0.906
19. D2096.8 nap-1 59459 5.705 0.951 - 0.960 - 0.946 0.989 0.943 0.916 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
20. B0024.13 B0024.13 4311 5.704 0.942 - 0.938 - 0.957 0.953 0.971 0.943 Polyprenol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17428]
21. T01C3.7 fib-1 23572 5.702 0.971 - 0.950 - 0.958 0.983 0.930 0.910 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
22. F58A4.9 rpac-19 2692 5.701 0.905 - 0.952 - 0.961 0.978 0.969 0.936 Probable DNA-directed RNA polymerases I and III subunit RPAC2 [Source:UniProtKB/Swiss-Prot;Acc:P34476]
23. C16A3.3 let-716 8448 5.7 0.899 - 0.959 - 0.969 0.989 0.960 0.924
24. C18A3.7 C18A3.7 1986 5.7 0.942 - 0.963 - 0.978 0.953 0.960 0.904
25. W04C9.5 W04C9.5 0 5.699 0.951 - 0.947 - 0.967 0.985 0.953 0.896
26. Y113G7B.17 prmt-1 43709 5.696 0.962 - 0.948 - 0.950 0.977 0.936 0.923 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
27. T04A8.7 T04A8.7 0 5.696 0.945 - 0.946 - 0.975 0.978 0.937 0.915
28. Y37D8A.11 cec-7 8801 5.694 0.947 - 0.923 - 0.953 0.981 0.950 0.940 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
29. T28A8.5 T28A8.5 0 5.693 0.948 - 0.930 - 0.947 0.938 0.957 0.973
30. Y54H5A.2 Y54H5A.2 2168 5.693 0.969 - 0.954 - 0.962 0.959 0.948 0.901
31. K01G5.8 K01G5.8 4694 5.692 0.958 - 0.948 - 0.962 0.983 0.930 0.911
32. ZK512.4 ZK512.4 662 5.691 0.928 - 0.913 - 0.963 0.983 0.938 0.966 Signal recognition particle 9 kDa protein [Source:UniProtKB/Swiss-Prot;Acc:P34642]
33. M28.8 M28.8 490 5.688 0.942 - 0.947 - 0.961 0.985 0.941 0.912
34. T25G3.4 T25G3.4 9394 5.686 0.960 - 0.929 - 0.964 0.968 0.948 0.917 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
35. Y48B6A.3 xrn-2 4881 5.685 0.956 - 0.954 - 0.960 0.967 0.932 0.916 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
36. Y116A8C.42 snr-1 17062 5.681 0.962 - 0.926 - 0.913 0.982 0.972 0.926 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
37. Y71G12B.9 lin-65 7476 5.681 0.924 - 0.921 - 0.948 0.973 0.954 0.961 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
38. C49H3.4 C49H3.4 648 5.68 0.939 - 0.906 - 0.935 0.980 0.975 0.945
39. C28A5.1 C28A5.1 1076 5.679 0.935 - 0.944 - 0.946 0.968 0.971 0.915
40. Y71G12B.8 ddx-27 3584 5.679 0.939 - 0.933 - 0.957 0.983 0.934 0.933 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
41. F55A12.8 nath-10 4253 5.678 0.895 - 0.934 - 0.963 0.980 0.963 0.943 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
42. Y54E10A.11 Y54E10A.11 2415 5.678 0.925 - 0.951 - 0.962 0.965 0.965 0.910 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
43. F10G7.1 tag-151 9031 5.676 0.953 - 0.961 - 0.955 0.990 0.973 0.844 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
44. C03D6.8 rpl-24.2 5932 5.674 0.958 - 0.883 - 0.962 0.992 0.947 0.932 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
45. Y54E5A.6 Y54E5A.6 770 5.674 0.942 - 0.945 - 0.936 0.980 0.965 0.906
46. C27H5.3 fust-1 6978 5.673 0.937 - 0.937 - 0.925 0.963 0.938 0.973 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
47. F55H2.6 clu-1 21404 5.672 0.949 - 0.935 - 0.909 0.983 0.939 0.957 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
48. Y53C12B.3 nos-3 20231 5.671 0.968 - 0.922 - 0.905 0.968 0.963 0.945 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
49. Y71F9B.4 snr-7 13542 5.671 0.941 - 0.943 - 0.941 0.980 0.957 0.909 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
50. Y54G9A.9 Y54G9A.9 1248 5.669 0.952 - 0.920 - 0.915 0.960 0.963 0.959
51. K07C5.6 K07C5.6 7375 5.666 0.924 - 0.957 - 0.951 0.986 0.921 0.927 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
52. T21G5.3 glh-1 16470 5.663 0.955 - 0.960 - 0.933 0.963 0.912 0.940 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
53. C43E11.12 C43E11.12 473 5.663 0.924 - 0.934 - 0.968 0.992 0.961 0.884
54. C01G8.6 hpo-32 7439 5.663 0.945 - 0.942 - 0.901 0.969 0.963 0.943
55. T28D9.3 T28D9.3 461 5.662 0.930 - 0.938 - 0.935 0.951 0.972 0.936
56. C16C10.9 C16C10.9 137 5.66 0.924 - 0.968 - 0.978 0.948 0.951 0.891
57. ZK945.3 puf-12 6266 5.66 0.842 - 0.947 - 0.967 0.990 0.970 0.944 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
58. F09F7.3 rpc-2 9751 5.659 0.960 - 0.928 - 0.970 0.986 0.940 0.875 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
59. F58B3.5 mars-1 6729 5.658 0.940 - 0.961 - 0.919 0.963 0.936 0.939 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
60. C27H6.2 ruvb-1 6291 5.658 0.956 - 0.905 - 0.957 0.980 0.935 0.925 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
61. Y48G1C.9 Y48G1C.9 1381 5.658 0.934 - 0.910 - 0.949 0.987 0.923 0.955
62. Y56A3A.19 Y56A3A.19 9680 5.656 0.940 - 0.950 - 0.942 0.957 0.970 0.897 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
63. T05B9.2 T05B9.2 0 5.655 0.938 - 0.935 - 0.930 0.967 0.961 0.924
64. C27A2.5 C27A2.5 0 5.655 0.931 - 0.935 - 0.921 0.972 0.940 0.956
65. T07D4.4 ddx-19 7234 5.655 0.947 - 0.968 - 0.892 0.946 0.948 0.954 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
66. B0513.2 B0513.2 3641 5.654 0.937 - 0.925 - 0.966 0.968 0.958 0.900
67. H27M09.2 rpb-5 4744 5.654 0.923 - 0.949 - 0.962 0.944 0.974 0.902 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
68. W07E6.1 nol-1 7892 5.653 0.905 - 0.906 - 0.983 0.986 0.974 0.899 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
69. W01B11.3 nol-5 23544 5.653 0.936 - 0.949 - 0.958 0.944 0.954 0.912 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
70. C16A11.5 C16A11.5 324 5.651 0.940 - 0.941 - 0.925 0.959 0.949 0.937
71. Y62E10A.12 lsm-3 4322 5.649 0.898 - 0.950 - 0.969 0.978 0.979 0.875 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
72. F56D12.5 vig-1 42594 5.649 0.950 - 0.950 - 0.891 0.974 0.920 0.964 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
73. F10E9.12 F10E9.12 907 5.648 0.904 - 0.931 - 0.891 0.976 0.984 0.962
74. F59A2.1 npp-9 34375 5.646 0.926 - 0.922 - 0.948 0.966 0.963 0.921 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
75. C27H6.3 tofu-1 2992 5.645 0.910 - 0.962 - 0.911 0.961 0.980 0.921 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
76. Y18D10A.19 fkb-2 48128 5.645 0.967 - 0.959 - 0.921 0.972 0.901 0.925 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
77. F21H12.5 fbf-2 4640 5.643 0.905 - 0.926 - 0.967 0.967 0.950 0.928 Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09312]
78. T06E6.10 T06E6.10 1355 5.641 0.937 - 0.924 - 0.927 0.979 0.945 0.929
79. T23F6.4 rbd-1 5825 5.641 0.873 - 0.936 - 0.960 0.977 0.964 0.931 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
80. Y23H5B.6 Y23H5B.6 5886 5.64 0.956 - 0.911 - 0.924 0.977 0.952 0.920
81. K07F5.15 K07F5.15 10171 5.638 0.928 - 0.910 - 0.978 0.985 0.884 0.953
82. T26G10.3 T26G10.3 0 5.637 0.923 - 0.943 - 0.968 0.981 0.944 0.878
83. K08A2.1 K08A2.1 818 5.636 0.898 - 0.946 - 0.944 0.983 0.915 0.950
84. C07E3.2 pro-2 4193 5.636 0.910 - 0.913 - 0.948 0.991 0.923 0.951 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
85. E02H9.1 E02H9.1 3662 5.636 0.888 - 0.921 - 0.968 0.982 0.979 0.898
86. W08E12.8 W08E12.8 837 5.635 0.946 - 0.955 - 0.903 0.971 0.936 0.924
87. C27B7.6 C27B7.6 983 5.635 0.951 - 0.932 - 0.911 0.966 0.943 0.932 Putative serine/threonine-protein phosphatase C27B7.6 [Source:UniProtKB/Swiss-Prot;Acc:P48460]
88. Y18D10A.16 Y18D10A.16 2881 5.634 0.941 - 0.885 - 0.941 0.971 0.953 0.943
89. C14A4.1 dohh-1 4890 5.633 0.926 - 0.960 - 0.938 0.978 0.942 0.889 Deoxyhypusine hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q17949]
90. D2030.4 D2030.4 13261 5.629 0.952 - 0.918 - 0.927 0.981 0.944 0.907 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:P90789]
91. C34E10.11 mrps-26 4649 5.628 0.903 - 0.963 - 0.962 0.963 0.941 0.896 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
92. Y53C12B.2 Y53C12B.2 6115 5.628 0.940 - 0.926 - 0.974 0.911 0.975 0.902 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
93. F59A2.3 cri-3 15077 5.627 0.924 - 0.948 - 0.871 0.984 0.964 0.936 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
94. C01B10.9 C01B10.9 4049 5.627 0.920 - 0.882 - 0.940 0.964 0.950 0.971
95. T05H4.11 T05H4.11 12835 5.626 0.913 - 0.913 - 0.953 0.940 0.962 0.945
96. F19B6.3 F19B6.3 219 5.626 0.934 - 0.902 - 0.954 0.980 0.952 0.904
97. C05C8.5 C05C8.5 2655 5.626 0.952 - 0.942 - 0.944 0.964 0.901 0.923
98. F23D12.1 F23D12.1 17095 5.625 0.966 - 0.929 - 0.952 0.973 0.938 0.867
99. F35G12.12 F35G12.12 5761 5.624 0.882 - 0.935 - 0.964 0.974 0.900 0.969
100. T24H7.1 phb-2 28775 5.624 0.949 - 0.938 - 0.918 0.957 0.950 0.912 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]

There are 815 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA