C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for F40A3.4

Gene ID Gene Name Reads Transcripts Annotation
F40A3.4 F40A3.4 200 F40A3.4

Genes with expression patterns similar to F40A3.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F40A3.4 F40A3.4 200 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. T20D4.3 T20D4.3 0 5.645 0.943 - 0.966 - 0.965 0.952 0.856 0.963
3. T26A5.9 dlc-1 59038 5.644 0.951 - 0.966 - 0.971 0.977 0.861 0.918 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
4. R151.9 pfd-5 6951 5.637 0.916 - 0.953 - 0.955 0.966 0.915 0.932 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
5. T23G11.10 T23G11.10 0 5.633 0.940 - 0.958 - 0.973 0.978 0.841 0.943
6. T24F1.1 raga-1 16171 5.62 0.950 - 0.960 - 0.952 0.968 0.860 0.930 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
7. C53A5.3 hda-1 18413 5.618 0.906 - 0.956 - 0.946 0.960 0.904 0.946 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
8. K08E7.1 eak-7 18960 5.615 0.925 - 0.937 - 0.951 0.984 0.864 0.954 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
9. T03F6.5 lis-1 8818 5.615 0.927 - 0.953 - 0.953 0.980 0.861 0.941 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
10. ZK863.6 dpy-30 16177 5.614 0.953 - 0.956 - 0.945 0.971 0.869 0.920 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
11. F13G3.4 dylt-1 21345 5.611 0.926 - 0.968 - 0.967 0.945 0.873 0.932 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
12. ZK742.1 xpo-1 20741 5.61 0.900 - 0.976 - 0.949 0.942 0.879 0.964 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
13. R10D12.15 R10D12.15 0 5.606 0.930 - 0.972 - 0.930 0.948 0.899 0.927
14. F28H1.3 aars-2 13537 5.603 0.947 - 0.968 - 0.941 0.951 0.856 0.940 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
15. K11D12.2 pqn-51 15951 5.597 0.920 - 0.966 - 0.951 0.940 0.895 0.925 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
16. C35D10.16 arx-6 8242 5.597 0.946 - 0.968 - 0.960 0.957 0.888 0.878 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
17. M01B12.3 arx-7 7584 5.597 0.944 - 0.978 - 0.936 0.975 0.854 0.910 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
18. ZK637.3 lnkn-1 16095 5.594 0.910 - 0.955 - 0.961 0.962 0.857 0.949 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
19. T10B5.5 cct-7 24616 5.594 0.891 - 0.968 - 0.952 0.957 0.881 0.945 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
20. C15H11.4 dhs-22 21674 5.594 0.929 - 0.967 - 0.948 0.941 0.865 0.944 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
21. B0303.15 mrpl-11 9889 5.593 0.927 - 0.972 - 0.923 0.951 0.896 0.924 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
22. F08F8.3 kap-1 31437 5.591 0.927 - 0.970 - 0.950 0.958 0.831 0.955 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
23. F38A5.1 odr-8 5283 5.591 0.930 - 0.957 - 0.963 0.962 0.878 0.901 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
24. K07D4.3 rpn-11 8834 5.59 0.910 - 0.948 - 0.935 0.955 0.872 0.970 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
25. F22B8.3 F22B8.3 0 5.587 0.943 - 0.970 - 0.935 0.953 0.864 0.922
26. F54C8.5 rheb-1 6358 5.587 0.931 - 0.960 - 0.940 0.923 0.893 0.940 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
27. C52E4.3 snr-4 19308 5.586 0.933 - 0.959 - 0.954 0.970 0.857 0.913 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
28. F59E12.11 sam-4 8179 5.582 0.904 - 0.974 - 0.929 0.943 0.883 0.949
29. F58E10.3 ddx-17 15107 5.581 0.934 - 0.975 - 0.921 0.943 0.884 0.924 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
30. R05D11.3 ran-4 15494 5.581 0.931 - 0.965 - 0.948 0.956 0.854 0.927 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
31. T10B11.3 ztf-4 5161 5.579 0.870 - 0.973 - 0.950 0.959 0.906 0.921 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
32. Y45G5AM.2 Y45G5AM.2 1267 5.579 0.926 - 0.958 - 0.928 0.953 0.884 0.930
33. C37A2.2 pqn-20 10913 5.577 0.904 - 0.960 - 0.956 0.944 0.854 0.959 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
34. H21P03.1 mbf-1 25586 5.575 0.913 - 0.953 - 0.975 0.964 0.848 0.922 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
35. T21B10.7 cct-2 13999 5.573 0.933 - 0.961 - 0.916 0.938 0.885 0.940 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
36. K05C4.11 sol-2 16560 5.572 0.948 - 0.937 - 0.959 0.962 0.834 0.932 Suppressor Of Lurcher movement defect [Source:RefSeq peptide;Acc:NP_493560]
37. F54A3.3 cct-3 25183 5.57 0.891 - 0.940 - 0.963 0.971 0.863 0.942 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
38. C14H10.1 C14H10.1 9903 5.568 0.894 - 0.980 - 0.962 0.957 0.837 0.938
39. D2013.2 wdfy-2 7286 5.567 0.905 - 0.973 - 0.944 0.955 0.864 0.926 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
40. C06H2.6 lmtr-3 11122 5.567 0.884 - 0.957 - 0.950 0.965 0.883 0.928 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
41. C43H8.2 mafr-1 5790 5.562 0.875 - 0.964 - 0.946 0.941 0.879 0.957 Repressor of RNA polymerase III transcription MAF1 [Source:RefSeq peptide;Acc:NP_492777]
42. T05C12.7 cct-1 41264 5.559 0.926 - 0.975 - 0.938 0.974 0.824 0.922 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
43. W08E3.3 ola-1 20885 5.556 0.921 - 0.947 - 0.959 0.956 0.844 0.929 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
44. E04D5.2 E04D5.2 0 5.555 0.929 - 0.961 - 0.946 0.947 0.854 0.918
45. F32A5.7 lsm-4 3785 5.555 0.926 - 0.965 - 0.934 0.930 0.856 0.944 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
46. R07B7.3 pqn-53 10459 5.555 0.919 - 0.978 - 0.940 0.976 0.807 0.935 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
47. C07G2.3 cct-5 44703 5.554 0.918 - 0.957 - 0.921 0.976 0.844 0.938 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
48. B0205.11 mrpl-9 9162 5.554 0.894 - 0.969 - 0.947 0.944 0.873 0.927 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
49. C38C10.2 slc-17.2 6819 5.553 0.928 - 0.950 - 0.966 0.954 0.873 0.882 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
50. F47D12.4 hmg-1.2 13779 5.55 0.931 - 0.961 - 0.980 0.963 0.814 0.901 High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
51. Y56A3A.20 ccf-1 18463 5.549 0.936 - 0.974 - 0.928 0.943 0.847 0.921 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
52. F13H10.2 ndx-9 3125 5.549 0.901 - 0.951 - 0.938 0.933 0.899 0.927 NADH pyrophosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q19427]
53. T21B10.1 mrpl-50 14595 5.547 0.923 - 0.962 - 0.912 0.941 0.874 0.935 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
54. Y49A3A.1 cept-2 8916 5.547 0.897 - 0.962 - 0.946 0.962 0.852 0.928 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
55. H17B01.4 emc-1 9037 5.547 0.918 - 0.950 - 0.968 0.956 0.813 0.942 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
56. W02D3.11 hrpf-1 4125 5.547 0.884 - 0.931 - 0.944 0.953 0.892 0.943 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_740877]
57. K07C5.1 arx-2 20142 5.546 0.946 - 0.967 - 0.953 0.954 0.838 0.888 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
58. Y54G2A.31 ubc-13 22367 5.543 0.908 - 0.975 - 0.957 0.975 0.871 0.857 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
59. F53F10.5 npp-11 3378 5.54 0.933 - 0.959 - 0.934 0.882 0.900 0.932 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
60. T19A6.3 nepr-1 6606 5.539 0.932 - 0.967 - 0.897 0.915 0.893 0.935 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
61. Y37E3.9 phb-1 29211 5.538 0.893 - 0.891 - 0.948 0.972 0.877 0.957 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
62. T05H4.6 erfa-1 12542 5.536 0.920 - 0.963 - 0.940 0.928 0.859 0.926 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
63. F26F4.10 rars-1 9971 5.533 0.933 - 0.974 - 0.924 0.908 0.857 0.937 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
64. M153.1 M153.1 201 5.532 0.934 - 0.961 - 0.928 0.933 0.885 0.891
65. C18H9.5 C18H9.5 0 5.532 0.904 - 0.946 - 0.968 0.968 0.798 0.948
66. B0285.1 cdk-12 5900 5.531 0.896 - 0.983 - 0.939 0.945 0.852 0.916 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
67. ZK637.4 ZK637.4 356 5.53 0.932 - 0.912 - 0.935 0.957 0.849 0.945
68. F33D4.7 emc-6 6534 5.53 0.917 - 0.976 - 0.915 0.955 0.839 0.928 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
69. ZK1058.4 ccdc-47 8879 5.529 0.936 - 0.942 - 0.949 0.956 0.817 0.929 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
70. F39B2.11 mtx-1 8526 5.524 0.934 - 0.967 - 0.911 0.913 0.855 0.944 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
71. C25D7.8 otub-1 7941 5.523 0.906 - 0.955 - 0.948 0.911 0.853 0.950 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
72. R07E5.14 rnp-4 11659 5.523 0.937 - 0.970 - 0.912 0.946 0.856 0.902 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
73. Y39A1C.3 cey-4 50694 5.518 0.937 - 0.919 - 0.945 0.952 0.830 0.935 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
74. F01F1.4 rabn-5 5269 5.517 0.896 - 0.926 - 0.952 0.943 0.896 0.904 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
75. Y97E10AR.1 Y97E10AR.1 0 5.517 0.931 - 0.952 - 0.940 0.922 0.867 0.905
76. T09B9.1 T09B9.1 848 5.516 0.903 - 0.954 - 0.921 0.938 0.884 0.916
77. Y82E9BR.15 elc-1 7115 5.515 0.928 - 0.898 - 0.976 0.944 0.830 0.939 ELongin C [Source:RefSeq peptide;Acc:NP_497405]
78. F08B6.1 F08B6.1 940 5.515 0.922 - 0.960 - 0.927 0.880 0.877 0.949
79. F13B12.2 F13B12.2 59 5.515 0.889 - 0.946 - 0.956 0.925 0.858 0.941
80. F55F10.1 F55F10.1 9760 5.514 0.934 - 0.952 - 0.948 0.919 0.867 0.894 Midasin [Source:RefSeq peptide;Acc:NP_500551]
81. C23H5.11 C23H5.11 166 5.514 0.930 - 0.977 - 0.917 0.960 0.834 0.896
82. T19C3.8 fem-2 9225 5.513 0.903 - 0.964 - 0.935 0.952 0.857 0.902 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
83. F27E5.1 F27E5.1 2005 5.512 0.894 - 0.941 - 0.941 0.987 0.869 0.880
84. M01E5.4 M01E5.4 7638 5.511 0.878 - 0.958 - 0.941 0.970 0.875 0.889
85. C35D10.6 C35D10.6 2770 5.511 0.916 - 0.943 - 0.887 0.958 0.865 0.942
86. C02F5.5 C02F5.5 3667 5.511 0.928 - 0.977 - 0.947 0.941 0.827 0.891
87. W04D2.5 mrps-11 5757 5.509 0.928 - 0.966 - 0.940 0.957 0.847 0.871 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
88. C12D5.3 C12D5.3 0 5.509 0.914 - 0.938 - 0.915 0.930 0.854 0.958
89. Y106G6A.5 dsbn-1 7130 5.508 0.942 - 0.964 - 0.916 0.967 0.783 0.936 Dysbindin protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XWQ1]
90. F56F3.1 ifet-1 25772 5.508 0.906 - 0.972 - 0.937 0.908 0.865 0.920 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
91. T19B4.2 npp-7 13073 5.507 0.903 - 0.973 - 0.952 0.901 0.820 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
92. M7.1 let-70 85699 5.507 0.950 - 0.961 - 0.949 0.913 0.819 0.915 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
93. K10C3.2 ensa-1 19836 5.505 0.924 - 0.955 - 0.961 0.905 0.833 0.927 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
94. T11G6.1 hars-1 7908 5.504 0.924 - 0.955 - 0.955 0.933 0.763 0.974 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
95. F43C1.2 mpk-1 13166 5.504 0.933 - 0.952 - 0.973 0.962 0.788 0.896 Mitogen-activated protein kinase mpk-1 [Source:UniProtKB/Swiss-Prot;Acc:P39745]
96. Y54G11A.14 Y54G11A.14 87 5.503 0.920 - 0.952 - 0.928 0.913 0.849 0.941
97. R144.10 R144.10 0 5.503 0.916 - 0.962 - 0.930 0.921 0.838 0.936
98. ZK652.1 snr-5 5993 5.503 0.891 - 0.970 - 0.942 0.910 0.869 0.921 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
99. W02B12.9 mfn-1 7309 5.502 0.926 - 0.964 - 0.939 0.915 0.851 0.907 Mitoferrin [Source:UniProtKB/Swiss-Prot;Acc:Q23125]
100. F42A6.7 hrp-1 28201 5.502 0.924 - 0.965 - 0.957 0.891 0.830 0.935 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]

There are 1326 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA