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Results for E03A3.2

Gene ID Gene Name Reads Transcripts Annotation
E03A3.2 rcq-5 1211 E03A3.2 ReCQ DNA helicase family [Source:RefSeq peptide;Acc:NP_497810]

Genes with expression patterns similar to E03A3.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. E03A3.2 rcq-5 1211 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ReCQ DNA helicase family [Source:RefSeq peptide;Acc:NP_497810]
2. F26F12.7 let-418 6089 7.328 0.896 0.912 0.880 0.912 0.971 0.953 0.888 0.916
3. M106.1 mix-1 7950 7.314 0.899 0.887 0.913 0.887 0.922 0.963 0.921 0.922 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
4. M01E5.5 top-1 25458 7.293 0.898 0.866 0.919 0.866 0.929 0.970 0.928 0.917 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
5. F38A5.13 dnj-11 19678 7.291 0.912 0.872 0.932 0.872 0.953 0.953 0.876 0.921 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
6. F01G4.3 skih-2 3353 7.264 0.882 0.901 0.932 0.901 0.943 0.957 0.840 0.908 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
7. F36F2.3 rbpl-1 15376 7.257 0.879 0.878 0.922 0.878 0.950 0.952 0.906 0.892 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
8. T05F1.6 hsr-9 13312 7.256 0.889 0.871 0.914 0.871 0.978 0.958 0.847 0.928
9. VC5.4 mys-1 3996 7.245 0.892 0.885 0.891 0.885 0.958 0.935 0.898 0.901 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
10. F55F8.4 cir-1 9437 7.232 0.898 0.890 0.896 0.890 0.916 0.975 0.865 0.902 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
11. F43G9.10 mfap-1 9205 7.224 0.910 0.875 0.885 0.875 0.895 0.977 0.888 0.919 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
12. F35G12.8 smc-4 6202 7.215 0.890 0.899 0.903 0.899 0.975 0.921 0.803 0.925 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
13. C29E4.2 kle-2 5527 7.215 0.895 0.883 0.879 0.883 0.949 0.925 0.846 0.955 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
14. Y73B6BL.18 smg-3 2772 7.21 0.811 0.876 0.927 0.876 0.916 0.961 0.901 0.942 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_500974]
15. ZK381.4 pgl-1 20651 7.206 0.885 0.884 0.931 0.884 0.980 0.933 0.801 0.908 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
16. C36B1.8 gls-1 8617 7.205 0.892 0.882 0.894 0.882 0.967 0.967 0.843 0.878 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
17. F22D6.5 prpf-4 9522 7.204 0.886 0.886 0.897 0.886 0.894 0.966 0.883 0.906 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
18. T23B12.7 dnj-22 2874 7.203 0.908 0.845 0.901 0.845 0.958 0.948 0.870 0.928 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_505178]
19. R11A8.7 R11A8.7 15531 7.201 0.924 0.898 0.885 0.898 0.881 0.968 0.827 0.920 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
20. C32F10.5 hmg-3 5776 7.2 0.866 0.863 0.880 0.863 0.951 0.966 0.904 0.907 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
21. T06D10.2 chaf-1 8121 7.194 0.891 0.856 0.875 0.856 0.930 0.970 0.884 0.932 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
22. F32A5.1 ada-2 8343 7.191 0.843 0.888 0.914 0.888 0.951 0.962 0.895 0.850 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
23. Y54E10A.9 vbh-1 28746 7.179 0.840 0.888 0.909 0.888 0.975 0.955 0.817 0.907 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
24. F56A3.3 npp-6 5425 7.178 0.843 0.872 0.914 0.872 0.974 0.945 0.854 0.904 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
25. D2089.1 rsp-7 11057 7.178 0.884 0.886 0.931 0.886 0.953 0.949 0.845 0.844 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
26. C08B11.6 arp-6 4646 7.177 0.836 0.900 0.913 0.900 0.959 0.969 0.818 0.882 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
27. T04A8.14 emb-5 11746 7.177 0.922 0.875 0.920 0.875 0.962 0.943 0.816 0.864 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
28. Y48G8AL.6 smg-2 12561 7.176 0.879 0.912 0.900 0.912 0.950 0.952 0.774 0.897 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
29. M01E11.3 M01E11.3 1946 7.174 0.843 0.869 0.904 0.869 0.953 0.949 0.894 0.893
30. C01G5.8 fan-1 1432 7.17 0.833 0.891 0.840 0.891 0.957 0.920 0.914 0.924 Fanconi-associated nuclease 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90740]
31. F18E2.3 scc-3 13464 7.165 0.893 0.875 0.927 0.875 0.937 0.961 0.818 0.879 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
32. Y61A9LA.8 sut-2 11388 7.163 0.897 0.858 0.922 0.858 0.954 0.978 0.859 0.837 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
33. F44A2.1 tag-153 16535 7.162 0.868 0.883 0.917 0.883 0.932 0.950 0.799 0.930
34. C38D4.3 mel-28 3515 7.16 0.869 0.875 0.855 0.875 0.959 0.958 0.871 0.898
35. C10C6.6 catp-8 8079 7.154 0.894 0.887 0.925 0.887 0.960 0.902 0.823 0.876 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
36. W03F9.5 ttb-1 8682 7.154 0.872 0.871 0.918 0.871 0.960 0.947 0.814 0.901 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
37. R07G3.3 npp-21 3792 7.154 0.884 0.874 0.859 0.874 0.945 0.955 0.822 0.941 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
38. B0041.7 xnp-1 9187 7.153 0.862 0.862 0.918 0.862 0.967 0.952 0.870 0.860 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
39. F36A2.13 ubr-5 9047 7.152 0.899 0.878 0.875 0.878 0.936 0.952 0.865 0.869 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
40. F17C11.10 F17C11.10 4355 7.152 0.880 0.905 0.900 0.905 0.972 0.918 0.814 0.858
41. F46B6.3 smg-4 4959 7.151 0.854 0.882 0.901 0.882 0.965 0.937 0.833 0.897 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
42. Y67H2A.6 csn-6 3098 7.146 0.831 0.878 0.925 0.878 0.963 0.932 0.839 0.900 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
43. F28B3.7 him-1 18274 7.145 0.913 0.869 0.920 0.869 0.942 0.962 0.810 0.860 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
44. F18A1.5 rpa-1 3109 7.139 0.896 0.883 0.909 0.883 0.946 0.893 0.779 0.950 Probable replication factor A 73 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19537]
45. E01A2.4 let-504 9788 7.138 0.879 0.872 0.913 0.872 0.924 0.984 0.778 0.916
46. Y2H9A.1 mes-4 3566 7.136 0.887 0.855 0.859 0.855 0.911 0.965 0.892 0.912 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
47. C50C3.6 prp-8 19582 7.134 0.868 0.878 0.908 0.878 0.965 0.939 0.793 0.905 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
48. ZK858.1 gld-4 14162 7.132 0.860 0.864 0.897 0.864 0.950 0.963 0.825 0.909 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
49. M01D7.6 emr-1 4358 7.129 0.894 0.897 0.897 0.897 0.962 0.947 0.801 0.834 Emerin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01971]
50. F12F6.3 rib-1 10524 7.129 0.876 0.864 0.913 0.864 0.955 0.933 0.801 0.923 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
51. F45H11.2 ned-8 13247 7.126 0.869 0.886 0.879 0.886 0.973 0.960 0.810 0.863 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
52. CD4.6 pas-6 18332 7.124 0.857 0.852 0.932 0.852 0.954 0.955 0.798 0.924 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
53. T01G1.3 sec-31 10504 7.123 0.863 0.882 0.916 0.882 0.973 0.940 0.839 0.828 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
54. C16C10.3 hrde-1 14922 7.122 0.857 0.875 0.914 0.875 0.950 0.936 0.816 0.899 Heritable RNAi Deficient [Source:RefSeq peptide;Acc:NP_497834]
55. C53D5.6 imb-3 28921 7.121 0.854 0.870 0.910 0.870 0.967 0.973 0.785 0.892 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
56. R119.4 pqn-59 16065 7.121 0.890 0.839 0.899 0.839 0.944 0.966 0.853 0.891 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
57. T05E11.4 spo-11 2806 7.12 0.845 0.867 0.885 0.867 0.953 0.929 0.821 0.953 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
58. C18G1.5 hil-4 21692 7.118 0.877 0.865 0.903 0.865 0.967 0.953 0.803 0.885 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
59. R01H2.6 ubc-18 13394 7.117 0.834 0.853 0.888 0.853 0.957 0.954 0.859 0.919 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
60. K08D12.1 pbs-1 21677 7.116 0.873 0.867 0.918 0.867 0.953 0.937 0.801 0.900 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
61. T21E12.4 dhc-1 20370 7.116 0.877 0.888 0.919 0.888 0.953 0.904 0.797 0.890 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
62. F19F10.11 F19F10.11 2683 7.116 0.836 0.849 0.902 0.849 0.958 0.973 0.885 0.864
63. F10G8.3 rae-1 7542 7.111 0.842 0.872 0.918 0.872 0.956 0.951 0.865 0.835 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
64. T20G5.11 rde-4 3966 7.111 0.873 0.896 0.930 0.896 0.956 0.955 0.716 0.889 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
65. C43E11.1 acin-1 7781 7.109 0.899 0.857 0.927 0.857 0.972 0.976 0.817 0.804 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
66. K03H1.2 mog-1 4057 7.108 0.891 0.849 0.910 0.849 0.933 0.963 0.863 0.850 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
67. F08F8.10 F08F8.10 2087 7.107 0.843 0.888 0.848 0.888 0.971 0.932 0.843 0.894
68. F46B6.6 F46B6.6 1570 7.107 0.904 0.848 0.909 0.848 0.938 0.955 0.818 0.887
69. C56C10.1 vps-33.2 2038 7.105 0.845 0.849 0.885 0.849 0.935 0.937 0.848 0.957 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495342]
70. Y65B4BL.2 deps-1 18277 7.104 0.903 0.878 0.929 0.878 0.951 0.929 0.797 0.839
71. T23D8.4 eif-3.C 15343 7.103 0.866 0.883 0.898 0.883 0.956 0.914 0.873 0.830 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
72. CD4.4 vps-37 4265 7.102 0.858 0.890 0.931 0.890 0.964 0.962 0.758 0.849 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_504474]
73. F39H11.5 pbs-7 13631 7.101 0.834 0.894 0.935 0.894 0.950 0.928 0.737 0.929 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
74. Y43C5A.6 rad-51 5327 7.099 0.842 0.867 0.934 0.867 0.967 0.906 0.826 0.890 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
75. T27D1.1 cyn-9 2940 7.099 0.874 0.850 0.853 0.850 0.978 0.936 0.878 0.880 Peptidyl-prolyl cis-trans isomerase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q09637]
76. D2005.5 drh-3 2293 7.092 0.811 0.859 0.923 0.859 0.953 0.927 0.859 0.901 Dicer Related Helicase [Source:RefSeq peptide;Acc:NP_492161]
77. F10B5.7 rrf-3 1900 7.09 0.865 0.871 0.917 0.871 0.971 0.875 0.881 0.839 RNA-dependent RNA polymerase Family [Source:RefSeq peptide;Acc:NP_495713]
78. EEED8.5 mog-5 4698 7.09 0.864 0.873 0.928 0.873 0.968 0.933 0.806 0.845 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
79. T07C4.10 T07C4.10 1563 7.089 0.877 0.859 0.926 0.859 0.985 0.923 0.821 0.839
80. F33H2.1 dog-1 2417 7.089 0.858 0.895 0.888 0.895 0.954 0.933 0.821 0.845 Deletions Of G-rich DNA [Source:RefSeq peptide;Acc:NP_493618]
81. K10D2.3 cid-1 7175 7.088 0.839 0.878 0.934 0.878 0.957 0.926 0.809 0.867 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
82. H19N07.1 erfa-3 19869 7.086 0.852 0.879 0.908 0.879 0.958 0.940 0.844 0.826 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
83. Y38A8.2 pbs-3 18117 7.085 0.868 0.879 0.905 0.879 0.951 0.927 0.789 0.887 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
84. C09G9.6 oma-1 18743 7.084 0.854 0.820 0.876 0.820 0.958 0.945 0.850 0.961
85. ZK328.5 npp-10 7652 7.084 0.867 0.860 0.908 0.860 0.978 0.936 0.744 0.931 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
86. C06E7.1 sams-3 26921 7.082 0.844 0.856 0.895 0.856 0.973 0.956 0.833 0.869 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
87. C27D11.1 egl-45 28282 7.081 0.859 0.845 0.904 0.845 0.960 0.936 0.812 0.920 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
88. R06F6.5 npp-19 5067 7.081 0.851 0.862 0.949 0.862 0.973 0.937 0.792 0.855 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
89. W05B10.1 his-74 21926 7.08 0.870 0.831 0.957 0.831 0.942 0.954 0.822 0.873 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
90. T20H4.4 adr-2 5495 7.079 0.886 0.876 0.898 0.876 0.921 0.951 0.806 0.865 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
91. C47D12.1 trr-1 4646 7.078 0.878 0.894 0.878 0.894 0.974 0.910 0.796 0.854 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
92. T05C12.6 mig-5 5242 7.078 0.847 0.870 0.889 0.870 0.954 0.941 0.832 0.875 Cytoplasmic signalling transducer; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EC49]
93. F46A9.4 skr-2 16831 7.077 0.884 0.849 0.920 0.849 0.974 0.944 0.784 0.873 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
94. K06H7.3 vms-1 4583 7.076 0.901 0.890 0.909 0.890 0.839 0.966 0.820 0.861
95. F36A4.7 ama-1 13620 7.073 0.850 0.880 0.932 0.880 0.966 0.952 0.813 0.800 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
96. C34B2.7 sdha-2 3043 7.072 0.908 0.810 0.894 0.810 0.951 0.936 0.886 0.877 Succinate dehydrogenase [Source:RefSeq peptide;Acc:NP_492798]
97. F36A2.1 cids-2 4551 7.072 0.904 0.884 0.914 0.884 0.938 0.964 0.735 0.849 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
98. F52E1.10 vha-18 3090 7.071 0.811 0.850 0.893 0.850 0.955 0.931 0.850 0.931 Probable V-type proton ATPase subunit H 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20666]
99. Y71H2AM.19 laf-1 9160 7.07 0.793 0.883 0.879 0.883 0.963 0.937 0.792 0.940 Putative DEAD-box RNA helicase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D0PV95]
100. T17E9.1 kin-18 8172 7.07 0.892 0.844 0.911 0.844 0.926 0.954 0.818 0.881 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA