C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for DY3.4

Gene ID Gene Name Reads Transcripts Annotation
DY3.4 trt-1 643 DY3.4a.1, DY3.4a.2, DY3.4b.1, DY3.4b.2, DY3.4b.3 Telomerase Reverse Transcriptase [Source:RefSeq peptide;Acc:NP_492373]

Genes with expression patterns similar to DY3.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. DY3.4 trt-1 643 6 1.000 1.000 1.000 1.000 1.000 1.000 - - Telomerase Reverse Transcriptase [Source:RefSeq peptide;Acc:NP_492373]
2. Y39G10AR.14 mcm-4 4312 5.52 0.902 0.907 0.903 0.907 0.942 0.959 - - yeast MCM (licensing factor) related [Source:RefSeq peptide;Acc:NP_001293322]
3. W03D2.4 pcn-1 20288 5.492 0.909 0.898 0.922 0.898 0.953 0.912 - - Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
4. C41D11.5 cmt-1 2725 5.474 0.892 0.920 0.887 0.920 0.877 0.978 - - p31CoMeT related [Source:RefSeq peptide;Acc:NP_491373]
5. R10E4.4 mcm-5 3737 5.464 0.899 0.898 0.874 0.898 0.974 0.921 - - DNA replication licensing factor mcm-5 [Source:UniProtKB/Swiss-Prot;Acc:Q21902]
6. EEED8.1 tofu-6 3962 5.455 0.857 0.923 0.882 0.923 0.918 0.952 - - Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
7. R08C7.10 wapl-1 4967 5.445 0.914 0.874 0.903 0.874 0.924 0.956 - - WAPL (Drosophila Wings APart-Like cohesin interactor) [Source:RefSeq peptide;Acc:NP_500567]
8. R06F6.1 cdl-1 14167 5.432 0.914 0.908 0.858 0.908 0.875 0.969 - - Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
9. K05C4.7 K05C4.7 3429 5.419 0.857 0.898 0.888 0.898 0.923 0.955 - - Armadillo repeat-containing protein 1 [Source:RefSeq peptide;Acc:NP_493565]
10. F10E9.7 F10E9.7 1842 5.396 0.873 0.899 0.880 0.899 0.890 0.955 - -
11. Y39A1A.12 orc-1 3169 5.385 0.902 0.894 0.870 0.894 0.870 0.955 - - ORC (Origin Recognition Complex) subunit [Source:RefSeq peptide;Acc:NP_499347]
12. T01C3.8 mut-15 4359 5.368 0.837 0.891 0.851 0.891 0.939 0.959 - - MUTator [Source:RefSeq peptide;Acc:NP_001256638]
13. B0414.3 hil-5 10816 5.358 0.881 0.872 0.843 0.872 0.938 0.952 - - Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
14. C34D4.12 cyn-12 7363 5.343 0.819 0.907 0.819 0.907 0.931 0.960 - - CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
15. C30G12.7 puf-8 5785 5.343 0.792 0.884 0.880 0.884 0.945 0.958 - - PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
16. T23G7.1 dpl-1 6620 5.342 0.826 0.905 0.824 0.905 0.923 0.959 - - Transcription factor dpl-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22703]
17. Y43E12A.1 cyb-2.1 12500 5.341 0.873 0.898 0.866 0.898 0.855 0.951 - - CYclin B [Source:RefSeq peptide;Acc:NP_502047]
18. H02I12.1 cbd-1 54348 5.34 0.919 0.909 0.904 0.909 0.734 0.965 - - Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
19. ZC513.6 oma-2 33660 5.339 0.868 0.892 0.895 0.892 0.841 0.951 - -
20. Y48G1A.5 xpo-2 11748 5.329 0.850 0.881 0.878 0.881 0.874 0.965 - - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
21. Y69A2AR.30 mdf-2 6403 5.328 0.841 0.891 0.822 0.891 0.907 0.976 - - MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
22. Y48G1C.9 Y48G1C.9 1381 5.322 0.818 0.898 0.856 0.898 0.892 0.960 - -
23. T09E8.2 him-17 4153 5.319 0.857 0.869 0.871 0.869 0.884 0.969 - - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
24. W01A8.5 tofu-5 5678 5.319 0.871 0.912 0.808 0.912 0.865 0.951 - - Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
25. E02H1.3 tag-124 2189 5.319 0.870 0.894 0.812 0.894 0.862 0.987 - - Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
26. C34E10.2 gop-2 5684 5.317 0.828 0.892 0.848 0.892 0.898 0.959 - - GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
27. F14B4.3 rpoa-2 7549 5.31 0.787 0.880 0.887 0.880 0.909 0.967 - - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
28. F44G4.4 tdp-1 3335 5.305 0.874 0.884 0.810 0.884 0.897 0.956 - - Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
29. Y37D8A.11 cec-7 8801 5.3 0.826 0.880 0.823 0.880 0.917 0.974 - - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
30. T22A3.5 pash-1 3240 5.297 0.781 0.868 0.853 0.868 0.969 0.958 - - PArtner of DroSHa (DRSH-1 interactor) [Source:RefSeq peptide;Acc:NP_001293461]
31. E02H1.4 parp-2 2110 5.293 0.815 0.882 0.875 0.882 0.864 0.975 - - Poly(ADP-ribose) polymerase pme-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09525]
32. B0024.13 B0024.13 4311 5.286 0.799 0.919 0.754 0.919 0.933 0.962 - - Polyprenol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17428]
33. Y40B1B.6 spr-5 6252 5.285 0.806 0.874 0.860 0.874 0.915 0.956 - - Probable lysine-specific histone demethylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWP6]
34. Y47G6A.28 tag-63 2022 5.282 0.829 0.872 0.895 0.872 0.863 0.951 - -
35. Y75B8A.16 Y75B8A.16 1406 5.281 0.841 0.919 0.713 0.919 0.950 0.939 - -
36. C48B4.7 C48B4.7 4006 5.28 0.774 0.924 0.838 0.924 0.867 0.953 - -
37. C09G9.2 npp-23 2886 5.28 0.838 0.904 0.873 0.904 0.806 0.955 - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_501537]
38. R03D7.7 nos-1 8407 5.276 0.825 0.904 0.894 0.904 0.788 0.961 - - NanOS related [Source:RefSeq peptide;Acc:NP_496358]
39. C02F5.4 cids-1 3125 5.274 0.867 0.878 0.868 0.878 0.803 0.980 - - CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
40. F35G12.12 F35G12.12 5761 5.266 0.838 0.878 0.748 0.878 0.952 0.972 - -
41. ZK1128.6 ttll-4 6059 5.262 0.811 0.887 0.823 0.887 0.880 0.974 - - Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
42. Y39G10AR.13 icp-1 3445 5.256 0.826 0.875 0.837 0.875 0.857 0.986 - - InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
43. F22B3.4 gfat-2 13687 5.255 0.904 0.840 0.924 0.840 0.770 0.977 - - Glutamine-Fructose 6-phosphate AminoTransferase homolog [Source:RefSeq peptide;Acc:NP_502156]
44. F59A2.1 npp-9 34375 5.251 0.841 0.876 0.810 0.876 0.898 0.950 - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
45. Y42H9B.2 rig-4 5088 5.248 0.902 0.895 0.857 0.895 0.742 0.957 - - Protein sidekick homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X8]
46. C04G2.6 dis-3 5048 5.238 0.817 0.869 0.863 0.869 0.843 0.977 - - Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
47. M01E11.6 klp-15 3125 5.236 0.810 0.852 0.850 0.852 0.919 0.953 - - Kinesin-like protein [Source:RefSeq peptide;Acc:NP_491633]
48. T28D9.2 rsp-5 6460 5.233 0.832 0.855 0.832 0.855 0.904 0.955 - - Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
49. T05F1.4 T05F1.4 2703 5.23 0.819 0.870 0.918 0.870 0.790 0.963 - -
50. C29A12.3 lig-1 3907 5.228 0.923 0.877 0.952 0.877 0.827 0.772 - - DNA ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q27474]
51. ZC434.7 ZC434.7 2308 5.221 0.819 0.833 0.832 0.833 0.933 0.971 - -
52. T23D8.7 hpo-24 4372 5.218 0.846 0.887 0.876 0.887 0.760 0.962 - -
53. ZK686.3 ZK686.3 23487 5.215 0.804 0.875 0.808 0.875 0.902 0.951 - - Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34669]
54. Y39E4B.2 snpc-1.2 5800 5.214 0.810 0.895 0.793 0.895 0.869 0.952 - - SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
55. Y62E10A.12 lsm-3 4322 5.213 0.818 0.872 0.780 0.872 0.916 0.955 - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
56. ZC328.4 san-1 1086 5.211 0.809 0.835 0.900 0.835 0.842 0.990 - -
57. F18A1.8 pid-1 3751 5.208 0.802 0.831 0.885 0.831 0.884 0.975 - - 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
58. C06G3.2 klp-18 4885 5.206 0.824 0.848 0.799 0.848 0.914 0.973 - - Kinesin-like protein [Source:RefSeq peptide;Acc:NP_501093]
59. W06H3.2 pus-1 1382 5.205 0.786 0.845 0.839 0.845 0.913 0.977 - - tRNA pseudouridine synthase [Source:RefSeq peptide;Acc:NP_507242]
60. Y45F10C.3 fbxa-215 4016 5.202 0.897 0.897 0.861 0.897 0.684 0.966 - - F-box A protein [Source:RefSeq peptide;Acc:NP_502641]
61. F28C6.3 cpf-1 1583 5.201 0.841 0.830 0.888 0.830 0.860 0.952 - - Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_495822]
62. F33G12.3 F33G12.3 2383 5.2 0.781 0.885 0.826 0.885 0.872 0.951 - -
63. R05D3.11 met-2 3364 5.199 0.821 0.868 0.862 0.868 0.828 0.952 - - Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
64. F21C3.4 rde-2 6286 5.198 0.717 0.901 0.823 0.901 0.902 0.954 - -
65. C36B1.5 prp-4 2714 5.198 0.762 0.888 0.798 0.888 0.901 0.961 - - yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
66. T07A9.10 T07A9.10 2400 5.193 0.702 0.888 0.787 0.888 0.959 0.969 - -
67. F52E1.1 pos-1 32185 5.192 0.871 0.888 0.839 0.888 0.752 0.954 - - POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
68. F28D1.1 wdr-46 4050 5.192 0.807 0.843 0.846 0.843 0.877 0.976 - - WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
69. F53F4.12 F53F4.12 2683 5.19 0.732 0.884 0.763 0.884 0.962 0.965 - -
70. F10E7.6 F10E7.6 2788 5.188 0.819 0.854 0.699 0.854 0.980 0.982 - -
71. W02B12.11 W02B12.11 8336 5.185 0.809 0.849 0.841 0.849 0.872 0.965 - - N-acetyllactosamine synthase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGS9]
72. T05H4.11 T05H4.11 12835 5.184 0.665 0.909 0.834 0.909 0.902 0.965 - -
73. T02C12.3 tftc-5 1421 5.178 0.738 0.860 0.869 0.860 0.885 0.966 - - Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_497808]
74. C14B1.3 C14B1.3 2375 5.174 0.893 0.833 0.892 0.833 0.762 0.961 - -
75. M01E11.5 cey-3 20931 5.173 0.802 0.867 0.834 0.867 0.821 0.982 - - C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
76. K01C8.9 nst-1 4587 5.171 0.752 0.867 0.807 0.867 0.928 0.950 - - Guanine nucleotide-binding protein-like 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21086]
77. C26D10.1 ran-3 11111 5.171 0.841 0.872 0.810 0.872 0.823 0.953 - - Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
78. C04F5.9 C04F5.9 776 5.169 0.804 0.916 0.709 0.916 0.868 0.956 - -
79. Y18D10A.16 Y18D10A.16 2881 5.162 0.812 0.824 0.820 0.824 0.918 0.964 - -
80. C50F2.3 C50F2.3 3084 5.156 0.829 0.849 0.870 0.849 0.781 0.978 - -
81. H43I07.2 rpac-40 3342 5.152 0.798 0.824 0.837 0.824 0.907 0.962 - - RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
82. C48B4.8 C48B4.8 1721 5.146 0.884 0.740 0.879 0.740 0.919 0.984 - -
83. K04C2.3 K04C2.3 23540 5.14 0.745 0.900 0.693 0.900 0.924 0.978 - -
84. D2007.4 mrpl-18 2880 5.139 0.772 0.887 0.779 0.887 0.863 0.951 - - 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
85. C05C8.5 C05C8.5 2655 5.136 0.776 0.856 0.775 0.856 0.898 0.975 - -
86. F31C3.5 psf-2 1813 5.13 0.792 0.875 0.787 0.875 0.845 0.956 - - Probable DNA replication complex GINS protein PSF2 [Source:UniProtKB/Swiss-Prot;Acc:O62193]
87. W03F9.2 W03F9.2 1754 5.13 0.720 0.840 0.864 0.840 0.903 0.963 - -
88. W03F8.4 W03F8.4 20285 5.128 0.785 0.896 0.753 0.896 0.836 0.962 - -
89. Y39B6A.35 tgt-2 2364 5.127 0.777 0.828 0.802 0.828 0.922 0.970 - - Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
90. K08F4.2 gtbp-1 25222 5.127 0.772 0.861 0.750 0.861 0.926 0.957 - - ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
91. B0414.5 cpb-3 11584 5.12 0.832 0.850 0.831 0.850 0.805 0.952 - - Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
92. F35H10.6 F35H10.6 1321 5.119 0.798 0.805 0.969 0.805 0.889 0.853 - -
93. R09B3.1 exo-3 4401 5.104 0.789 0.844 0.849 0.844 0.816 0.962 - - EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
94. ZK938.7 rnh-1.2 1269 5.102 0.771 0.848 0.836 0.848 0.841 0.958 - - RNase H [Source:RefSeq peptide;Acc:NP_496121]
95. F53A2.4 nud-1 7818 5.098 0.747 0.839 0.837 0.839 0.869 0.967 - - Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
96. C27H6.2 ruvb-1 6291 5.096 0.741 0.808 0.825 0.808 0.947 0.967 - - RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
97. T14B4.2 T14B4.2 4487 5.095 0.792 0.841 0.831 0.841 0.829 0.961 - -
98. F19F10.10 ets-6 1342 5.086 0.691 0.861 0.784 0.861 0.937 0.952 - - ETS class transcription factor [Source:RefSeq peptide;Acc:NP_504954]
99. D2096.12 D2096.12 4062 5.081 0.733 0.895 0.750 0.895 0.851 0.957 - -
100. F55A12.8 nath-10 4253 5.078 0.705 0.858 0.771 0.858 0.908 0.978 - - N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]

There are 181 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA