C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F54C1.3

Gene ID Gene Name Reads Transcripts Annotation
F54C1.3 mes-3 4125 F54C1.3a, F54C1.3b Polycomb protein mes-3 [Source:UniProtKB/Swiss-Prot;Acc:Q10665]

Genes with expression patterns similar to F54C1.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54C1.3 mes-3 4125 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Polycomb protein mes-3 [Source:UniProtKB/Swiss-Prot;Acc:Q10665]
2. R06A4.4 imb-2 10302 7.595 0.981 0.967 0.972 0.967 0.956 0.951 0.936 0.865 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
3. T05C12.7 cct-1 41264 7.55 0.964 0.948 0.962 0.948 0.941 0.930 0.933 0.924 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
4. F43G9.5 cfim-1 9169 7.537 0.979 0.978 0.974 0.978 0.953 0.951 0.900 0.824 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
5. C17H12.13 anat-1 12995 7.526 0.952 0.954 0.951 0.954 0.956 0.972 0.937 0.850 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
6. C36A4.5 maph-1.3 15493 7.524 0.941 0.958 0.967 0.958 0.961 0.967 0.902 0.870 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
7. F01F1.8 cct-6 29460 7.521 0.944 0.927 0.958 0.927 0.949 0.970 0.943 0.903 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
8. T20D3.7 vps-26 9349 7.512 0.968 0.972 0.958 0.972 0.912 0.930 0.939 0.861 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
9. Y49E10.6 his-72 32293 7.51 0.950 0.949 0.948 0.949 0.944 0.953 0.901 0.916 Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
10. T24H10.3 dnj-23 11446 7.51 0.952 0.952 0.933 0.952 0.976 0.973 0.940 0.832 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
11. K07A1.12 lin-53 15817 7.509 0.949 0.967 0.965 0.967 0.960 0.964 0.909 0.828 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
12. T26E3.3 par-6 8650 7.505 0.953 0.978 0.972 0.978 0.904 0.957 0.891 0.872 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
13. F09G2.9 attf-2 14771 7.498 0.942 0.960 0.941 0.960 0.979 0.971 0.931 0.814 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
14. F21C3.4 rde-2 6286 7.491 0.907 0.959 0.932 0.959 0.956 0.946 0.934 0.898
15. Y41D4B.13 ced-2 10100 7.487 0.947 0.971 0.962 0.971 0.945 0.966 0.887 0.838 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
16. Y73B6A.5 lin-45 10864 7.486 0.957 0.977 0.954 0.977 0.918 0.958 0.905 0.840 Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
17. Y41C4A.10 elb-1 9743 7.486 0.970 0.954 0.935 0.954 0.968 0.953 0.837 0.915 ELongin B [Source:RefSeq peptide;Acc:NP_499517]
18. T24F1.1 raga-1 16171 7.486 0.964 0.958 0.958 0.958 0.946 0.948 0.915 0.839 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
19. F53E4.1 F53E4.1 7979 7.483 0.946 0.959 0.929 0.959 0.977 0.954 0.872 0.887
20. F59G1.5 ptp-2 7879 7.479 0.933 0.958 0.968 0.958 0.953 0.976 0.828 0.905 Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
21. M01B12.3 arx-7 7584 7.469 0.963 0.940 0.951 0.940 0.948 0.920 0.912 0.895 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
22. Y38C9A.2 cgp-1 11756 7.464 0.943 0.962 0.941 0.962 0.953 0.950 0.933 0.820 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
23. W07A8.3 dnj-25 5970 7.461 0.953 0.966 0.948 0.966 0.924 0.929 0.919 0.856 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001256947]
24. C43E11.10 cdc-6 5331 7.459 0.974 0.980 0.909 0.980 0.948 0.894 0.928 0.846 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
25. F55A12.3 ppk-1 8598 7.459 0.965 0.968 0.954 0.968 0.901 0.938 0.835 0.930 PIP Kinase [Source:RefSeq peptide;Acc:NP_491576]
26. F43G6.9 patr-1 23000 7.458 0.918 0.965 0.946 0.965 0.970 0.949 0.904 0.841 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
27. R13A5.1 cup-5 5245 7.454 0.959 0.962 0.971 0.962 0.927 0.917 0.890 0.866 CUP-5L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q8T666]
28. F39B2.1 hinf-1 10002 7.454 0.950 0.970 0.971 0.970 0.946 0.967 0.888 0.792 HIstone Nuclear Factor p (P) homolog [Source:RefSeq peptide;Acc:NP_493579]
29. K04G2.2 aho-3 15189 7.452 0.931 0.969 0.958 0.969 0.976 0.937 0.889 0.823
30. F10G8.6 nubp-1 3262 7.451 0.971 0.942 0.944 0.942 0.965 0.924 0.878 0.885 Cytosolic Fe-S cluster assembly factor NUBP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93459]
31. R07E5.14 rnp-4 11659 7.447 0.975 0.954 0.968 0.954 0.950 0.960 0.898 0.788 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
32. D2092.5 maco-1 7931 7.442 0.940 0.957 0.965 0.957 0.938 0.920 0.932 0.833 MACOilin homolog [Source:RefSeq peptide;Acc:NP_491902]
33. F44G4.4 tdp-1 3335 7.439 0.970 0.941 0.945 0.941 0.948 0.958 0.901 0.835 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
34. C14B1.4 wdr-5.1 4424 7.437 0.933 0.945 0.963 0.945 0.945 0.971 0.878 0.857 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
35. ZK863.6 dpy-30 16177 7.433 0.947 0.954 0.938 0.954 0.939 0.934 0.910 0.857 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
36. B0285.1 cdk-12 5900 7.432 0.971 0.969 0.951 0.969 0.953 0.872 0.879 0.868 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
37. Y62F5A.1 mdt-8 1838 7.432 0.943 0.964 0.968 0.964 0.954 0.938 0.877 0.824 Mediator of RNA polymerase II transcription subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9U1W2]
38. Y62E10A.11 mdt-9 5971 7.43 0.937 0.950 0.925 0.950 0.938 0.955 0.864 0.911 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
39. T18H9.7 tag-232 8234 7.428 0.931 0.958 0.951 0.958 0.948 0.955 0.921 0.806
40. F28D1.10 gex-3 5286 7.422 0.931 0.978 0.973 0.978 0.937 0.955 0.863 0.807 Membrane-associated protein gex-3 [Source:UniProtKB/Swiss-Prot;Acc:P55163]
41. C07G2.3 cct-5 44703 7.421 0.953 0.903 0.924 0.903 0.943 0.969 0.916 0.910 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
42. T22C1.3 T22C1.3 2305 7.418 0.978 0.972 0.961 0.972 0.937 0.920 0.857 0.821
43. C08F8.1 pfd-1 10199 7.417 0.956 0.933 0.880 0.933 0.959 0.955 0.903 0.898 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
44. D1007.8 D1007.8 1265 7.417 0.919 0.946 0.963 0.946 0.963 0.949 0.865 0.866
45. R11A5.2 nud-2 15326 7.416 0.958 0.941 0.961 0.941 0.937 0.915 0.881 0.882 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_492172]
46. ZK1307.6 fzr-1 8507 7.416 0.938 0.946 0.971 0.946 0.899 0.936 0.926 0.854 FiZzy Related family [Source:RefSeq peptide;Acc:NP_496075]
47. K07C5.1 arx-2 20142 7.415 0.972 0.964 0.955 0.964 0.921 0.868 0.890 0.881 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
48. C48B6.3 C48B6.3 6610 7.41 0.903 0.943 0.941 0.943 0.948 0.953 0.936 0.843
49. B0205.9 B0205.9 3651 7.406 0.930 0.958 0.944 0.958 0.927 0.974 0.922 0.793
50. F35D11.5 F35D11.5 14785 7.404 0.929 0.968 0.928 0.968 0.942 0.934 0.882 0.853
51. T19C3.8 fem-2 9225 7.404 0.965 0.968 0.977 0.968 0.942 0.947 0.832 0.805 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
52. Y62E10A.12 lsm-3 4322 7.401 0.962 0.926 0.933 0.926 0.946 0.963 0.893 0.852 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
53. K11H3.6 mrpl-36 7328 7.399 0.970 0.938 0.971 0.938 0.966 0.932 0.870 0.814 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
54. ZK1010.3 frg-1 3533 7.398 0.938 0.964 0.971 0.964 0.953 0.927 0.901 0.780 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
55. Y87G2A.6 cyn-15 2566 7.398 0.891 0.951 0.969 0.951 0.959 0.951 0.913 0.813 CYclophyliN [Source:RefSeq peptide;Acc:NP_493378]
56. T10G3.6 gut-2 3374 7.396 0.956 0.921 0.954 0.921 0.955 0.920 0.900 0.869
57. C01F6.1 cpna-3 5414 7.396 0.959 0.955 0.952 0.955 0.895 0.904 0.863 0.913 CoPiNe domain protein, Atypical [Source:RefSeq peptide;Acc:NP_501584]
58. Y71G12B.12 atg-5 5575 7.394 0.906 0.957 0.954 0.957 0.946 0.888 0.939 0.847 Autophagy protein 5 [Source:RefSeq peptide;Acc:NP_001293440]
59. Y106G6A.5 dsbn-1 7130 7.394 0.954 0.970 0.964 0.970 0.940 0.895 0.860 0.841 Dysbindin protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XWQ1]
60. D1046.1 cfim-2 4266 7.393 0.964 0.928 0.953 0.928 0.917 0.952 0.879 0.872 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_001255355]
61. C26E6.7 eri-9 8069 7.39 0.954 0.962 0.920 0.962 0.951 0.939 0.893 0.809 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
62. T19B4.2 npp-7 13073 7.39 0.943 0.966 0.977 0.966 0.917 0.893 0.902 0.826 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
63. F59A2.1 npp-9 34375 7.389 0.941 0.942 0.954 0.942 0.971 0.942 0.902 0.795 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
64. T03F6.5 lis-1 8818 7.388 0.940 0.909 0.977 0.909 0.921 0.954 0.869 0.909 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
65. Y116A8C.34 cyn-13 2972 7.388 0.958 0.961 0.915 0.961 0.932 0.940 0.866 0.855 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
66. Y14H12B.2 Y14H12B.2 6496 7.388 0.940 0.935 0.969 0.935 0.963 0.948 0.909 0.789
67. T01B7.6 trcs-2 9792 7.387 0.935 0.977 0.956 0.977 0.932 0.966 0.930 0.714 TRansport of membrane to Cell Surface [Source:RefSeq peptide;Acc:NP_495857]
68. DY3.7 sup-17 12176 7.385 0.927 0.950 0.960 0.950 0.925 0.922 0.866 0.885 SUPpressor [Source:RefSeq peptide;Acc:NP_492377]
69. Y54E5B.1 smp-1 4196 7.38 0.940 0.970 0.965 0.970 0.950 0.930 0.784 0.871 Semaphorin-1A [Source:UniProtKB/Swiss-Prot;Acc:Q17330]
70. Y48G1C.2 csk-1 6388 7.378 0.968 0.959 0.965 0.959 0.912 0.935 0.857 0.823 Tyrosine-protein kinase csk-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ECJ6]
71. ZK1290.4 nfi-1 5353 7.378 0.938 0.957 0.955 0.957 0.950 0.969 0.840 0.812 NFI (Nuclear Factor I) family [Source:RefSeq peptide;Acc:NP_001022505]
72. ZK973.11 ZK973.11 2422 7.377 0.952 0.918 0.957 0.918 0.958 0.954 0.903 0.817
73. W10D9.4 nfyb-1 2584 7.376 0.965 0.971 0.928 0.971 0.919 0.950 0.924 0.748 Nuclear transcription Factor Y, B (beta) subunit [Source:RefSeq peptide;Acc:NP_493740]
74. Y55F3AM.12 dcap-1 8679 7.375 0.953 0.968 0.957 0.968 0.957 0.914 0.895 0.763 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
75. C41C4.6 ulp-4 13338 7.373 0.915 0.944 0.945 0.944 0.959 0.939 0.895 0.832 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
76. Y69A2AR.2 ric-8 4224 7.373 0.899 0.959 0.949 0.959 0.915 0.975 0.854 0.863 Synembryn [Source:UniProtKB/Swiss-Prot;Acc:Q9GSX9]
77. K08E7.1 eak-7 18960 7.372 0.956 0.942 0.953 0.942 0.942 0.955 0.830 0.852 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
78. T12E12.3 T12E12.3 3844 7.371 0.927 0.896 0.962 0.896 0.953 0.966 0.896 0.875
79. ZK484.4 ZK484.4 6097 7.371 0.928 0.965 0.979 0.965 0.891 0.908 0.902 0.833
80. Y105E8A.22 exc-4 6168 7.37 0.947 0.929 0.946 0.929 0.939 0.955 0.914 0.811 Chloride intracellular channel exc-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8WQA4]
81. F15D4.1 btf-1 2519 7.37 0.911 0.953 0.953 0.953 0.942 0.940 0.932 0.786 BTAF (TBP-associated factor) homolog [Source:RefSeq peptide;Acc:NP_496802]
82. F21D5.6 F21D5.6 1798 7.369 0.964 0.960 0.956 0.960 0.908 0.899 0.886 0.836
83. Y57G11C.36 Y57G11C.36 10590 7.369 0.927 0.955 0.956 0.955 0.949 0.901 0.845 0.881
84. R05D3.4 rfp-1 3613 7.368 0.944 0.939 0.959 0.939 0.938 0.924 0.888 0.837 E3 ubiquitin-protein ligase bre-1 [Source:UniProtKB/Swiss-Prot;Acc:P34537]
85. C53A5.3 hda-1 18413 7.368 0.961 0.971 0.962 0.971 0.907 0.899 0.850 0.847 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
86. Y54E5B.4 ubc-16 8386 7.368 0.949 0.963 0.962 0.963 0.949 0.933 0.843 0.806 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
87. F41H10.11 sand-1 5039 7.368 0.944 0.959 0.943 0.959 0.933 0.954 0.913 0.763 SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
88. K07D4.3 rpn-11 8834 7.367 0.952 0.951 0.955 0.951 0.953 0.914 0.860 0.831 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
89. B0035.12 sart-3 7188 7.367 0.919 0.942 0.941 0.942 0.965 0.924 0.905 0.829 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
90. C18E9.3 szy-20 6819 7.367 0.954 0.951 0.942 0.951 0.958 0.954 0.877 0.780 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
91. F38A5.1 odr-8 5283 7.367 0.949 0.958 0.970 0.958 0.883 0.885 0.864 0.900 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
92. C49H3.10 xpo-3 9101 7.367 0.911 0.927 0.941 0.927 0.955 0.949 0.889 0.868 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
93. Y53C10A.12 hsf-1 7899 7.366 0.957 0.955 0.929 0.955 0.906 0.878 0.908 0.878 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
94. Y42G9A.6 wht-7 2348 7.366 0.949 0.969 0.945 0.969 0.947 0.930 0.850 0.807 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_001040881]
95. C38C10.5 rgr-1 4146 7.365 0.936 0.969 0.942 0.969 0.924 0.960 0.861 0.804 Mediator of RNA polymerase II transcription subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:Q03570]
96. F58G11.6 ccz-1 5655 7.365 0.950 0.959 0.963 0.959 0.908 0.956 0.858 0.812
97. C01F6.8 icln-1 6586 7.364 0.940 0.938 0.959 0.938 0.963 0.931 0.926 0.769 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
98. T14G10.6 tsp-12 10308 7.364 0.937 0.960 0.942 0.960 0.932 0.956 0.861 0.816 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
99. B0303.15 mrpl-11 9889 7.364 0.940 0.942 0.945 0.942 0.929 0.975 0.859 0.832 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
100. F10E7.6 F10E7.6 2788 7.363 0.985 0.933 0.963 0.933 0.916 0.926 0.874 0.833

There are 2184 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA