C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for B0001.4

Gene ID Gene Name Reads Transcripts Annotation
B0001.4 B0001.4 1786 B0001.4a, B0001.4b Probable uridine-cytidine kinase [Source:UniProtKB/Swiss-Prot;Acc:Q17413]

Genes with expression patterns similar to B0001.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0001.4 B0001.4 1786 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable uridine-cytidine kinase [Source:UniProtKB/Swiss-Prot;Acc:Q17413]
2. T05F1.6 hsr-9 13312 7.338 0.905 0.907 0.877 0.907 0.913 0.931 0.968 0.930
3. C37C3.1 C37C3.1 2206 7.266 0.930 0.942 0.881 0.942 0.832 0.966 0.917 0.856
4. ZC395.8 ztf-8 5521 7.256 0.815 0.931 0.878 0.931 0.876 0.955 0.920 0.950 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
5. F45H11.3 hpo-35 8299 7.222 0.900 0.904 0.861 0.904 0.883 0.957 0.941 0.872
6. F59B2.7 rab-6.1 10749 7.221 0.897 0.919 0.888 0.919 0.866 0.968 0.905 0.859 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
7. T01G9.4 npp-2 5361 7.194 0.875 0.904 0.847 0.904 0.869 0.962 0.938 0.895 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
8. C36B1.8 gls-1 8617 7.191 0.862 0.907 0.865 0.907 0.881 0.927 0.950 0.892 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
9. F32E10.6 cec-5 10643 7.187 0.871 0.934 0.848 0.934 0.917 0.878 0.958 0.847 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
10. F46B6.3 smg-4 4959 7.182 0.906 0.924 0.872 0.924 0.849 0.853 0.953 0.901 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
11. VC5.4 mys-1 3996 7.179 0.810 0.926 0.867 0.926 0.865 0.980 0.918 0.887 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
12. F12F6.3 rib-1 10524 7.172 0.813 0.911 0.881 0.911 0.878 0.951 0.919 0.908 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
13. F18E2.3 scc-3 13464 7.172 0.869 0.897 0.858 0.897 0.878 0.967 0.925 0.881 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
14. F56G4.6 F56G4.6 626 7.167 0.857 0.889 0.875 0.889 0.844 0.973 0.924 0.916
15. F32A5.1 ada-2 8343 7.166 0.860 0.896 0.878 0.896 0.893 0.952 0.919 0.872 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
16. T20G5.11 rde-4 3966 7.166 0.849 0.872 0.872 0.872 0.911 0.952 0.934 0.904 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
17. T20B12.2 tbp-1 9014 7.165 0.831 0.923 0.872 0.923 0.835 0.956 0.919 0.906 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
18. F25B3.1 ehbp-1 6409 7.16 0.850 0.907 0.855 0.907 0.890 0.962 0.912 0.877 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
19. M106.1 mix-1 7950 7.159 0.840 0.891 0.877 0.891 0.880 0.958 0.915 0.907 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
20. T20F5.7 T20F5.7 5210 7.149 0.854 0.924 0.884 0.924 0.892 0.953 0.915 0.803
21. K06H7.9 idi-1 3291 7.148 0.835 0.923 0.821 0.923 0.910 0.887 0.892 0.957 Isopentenyl Diphosphate Isomerase [Source:RefSeq peptide;Acc:NP_498766]
22. CD4.6 pas-6 18332 7.142 0.860 0.912 0.822 0.912 0.884 0.953 0.923 0.876 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
23. F36A2.1 cids-2 4551 7.141 0.868 0.950 0.827 0.950 0.903 0.866 0.901 0.876 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
24. EEED8.7 rsp-4 13043 7.135 0.828 0.924 0.853 0.924 0.883 0.950 0.933 0.840 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
25. F08F8.10 F08F8.10 2087 7.133 0.883 0.943 0.786 0.943 0.883 0.973 0.872 0.850
26. C06G3.11 tin-9.1 7773 7.126 0.853 0.950 0.765 0.950 0.904 0.901 0.920 0.883 Mitochondrial import inner membrane translocase subunit Tim9 [Source:UniProtKB/Swiss-Prot;Acc:Q17754]
27. F46F11.10 F46F11.10 968 7.126 0.874 0.923 0.855 0.923 0.824 0.971 0.939 0.817
28. D1007.7 nrd-1 6738 7.125 0.843 0.917 0.817 0.917 0.864 0.956 0.897 0.914 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
29. F40E3.2 mage-1 1696 7.12 0.865 0.888 0.865 0.888 0.784 0.985 0.901 0.944 Melanoma-Associated-antiGEn homolog [Source:RefSeq peptide;Acc:NP_491018]
30. C08B11.7 ubh-4 3186 7.117 0.869 0.960 0.852 0.960 0.816 0.921 0.900 0.839 Probable ubiquitin carboxyl-terminal hydrolase ubh-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09444]
31. ZK616.6 perm-3 16186 7.116 0.865 0.959 0.820 0.959 0.923 0.881 0.892 0.817 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
32. F20D12.1 csr-1 16351 7.109 0.893 0.872 0.829 0.872 0.875 0.955 0.898 0.915 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
33. T10H9.3 syx-18 2416 7.108 0.836 0.910 0.868 0.910 0.855 0.956 0.922 0.851 SYntaXin [Source:RefSeq peptide;Acc:NP_504687]
34. C26E6.5 fsn-1 6615 7.106 0.845 0.896 0.883 0.896 0.847 0.952 0.900 0.887 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
35. F43G9.10 mfap-1 9205 7.105 0.840 0.870 0.877 0.870 0.874 0.960 0.930 0.884 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
36. T23G11.7 T23G11.7 10001 7.099 0.872 0.894 0.854 0.894 0.863 0.958 0.936 0.828
37. B0361.8 algn-11 2891 7.098 0.823 0.926 0.867 0.926 0.864 0.966 0.935 0.791 Uncharacterized glycosyltransferase B0361.8 [Source:UniProtKB/Swiss-Prot;Acc:P53993]
38. Y54E2A.11 eif-3.B 13795 7.098 0.874 0.923 0.834 0.923 0.855 0.956 0.912 0.821 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
39. C50A2.2 cec-2 4169 7.097 0.822 0.889 0.879 0.889 0.900 0.961 0.894 0.863 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
40. C42C1.15 erl-1 1422 7.095 0.873 0.955 0.850 0.955 0.953 0.901 0.767 0.841 ERLin (ER lipid raft associated protein) homolog [Source:RefSeq peptide;Acc:NP_502339]
41. F37A4.8 isw-1 9337 7.09 0.888 0.910 0.884 0.910 0.849 0.952 0.893 0.804 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
42. W01B6.9 ndc-80 4670 7.09 0.879 0.853 0.858 0.853 0.872 0.958 0.928 0.889 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
43. K07A1.10 K07A1.10 5337 7.09 0.887 0.909 0.778 0.909 0.855 0.904 0.958 0.890
44. C08C3.4 cyk-7 12075 7.089 0.880 0.924 0.819 0.924 0.873 0.954 0.870 0.845 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
45. T10F2.3 ulp-1 8351 7.077 0.816 0.877 0.839 0.877 0.882 0.965 0.948 0.873 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
46. Y23H5A.7 cars-1 4455 7.076 0.855 0.924 0.867 0.924 0.864 0.956 0.925 0.761 Cysteinyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001293288]
47. Y105E8A.17 ekl-4 4732 7.075 0.807 0.936 0.813 0.936 0.870 0.905 0.953 0.855
48. Y54G9A.6 bub-3 9123 7.072 0.880 0.908 0.862 0.908 0.860 0.953 0.883 0.818 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
49. T28F3.3 hke-4.1 3896 7.071 0.810 0.963 0.898 0.963 0.853 0.884 0.880 0.820 Histidine-rich membrane protein KE4 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUC4]
50. B0024.11 B0024.11 2624 7.065 0.856 0.901 0.850 0.901 0.854 0.967 0.891 0.845 Putative pseudouridine synthase B0024.11 [Source:UniProtKB/Swiss-Prot;Acc:Q17426]
51. K07C5.8 cash-1 10523 7.061 0.873 0.881 0.846 0.881 0.846 0.931 0.956 0.847 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
52. ZC404.9 gck-2 8382 7.061 0.874 0.902 0.876 0.902 0.871 0.964 0.882 0.790 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
53. T20H4.4 adr-2 5495 7.058 0.879 0.912 0.806 0.912 0.830 0.972 0.918 0.829 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
54. R01H2.6 ubc-18 13394 7.053 0.851 0.893 0.804 0.893 0.868 0.973 0.937 0.834 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
55. Y17G7B.17 Y17G7B.17 11197 7.051 0.816 0.922 0.865 0.922 0.796 0.950 0.920 0.860
56. M01E5.5 top-1 25458 7.048 0.848 0.919 0.806 0.919 0.864 0.963 0.911 0.818 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
57. B0205.1 B0205.1 2403 7.047 0.889 0.868 0.866 0.868 0.806 0.958 0.895 0.897
58. Y65B4BR.5 icd-2 58321 7.047 0.863 0.899 0.822 0.899 0.855 0.869 0.958 0.882 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
59. T06D10.2 chaf-1 8121 7.044 0.837 0.869 0.824 0.869 0.904 0.956 0.915 0.870 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
60. T07E3.5 brc-2 3212 7.041 0.883 0.881 0.933 0.881 0.832 0.958 0.842 0.831 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_498502]
61. Y49F6B.4 smu-2 4164 7.038 0.858 0.890 0.845 0.890 0.778 0.962 0.970 0.845 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
62. C13G5.2 C13G5.2 3532 7.037 0.882 0.936 0.824 0.936 0.882 0.797 0.965 0.815
63. C54G10.2 rfc-1 8814 7.034 0.851 0.944 0.847 0.944 0.799 0.950 0.886 0.813 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
64. F41H10.6 hda-6 3325 7.034 0.879 0.893 0.882 0.893 0.845 0.975 0.903 0.764 Histone deacetylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20296]
65. F12F6.5 srgp-1 9048 7.033 0.745 0.925 0.864 0.925 0.836 0.959 0.884 0.895 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
66. ZK1236.7 ufbp-1 6217 7.033 0.866 0.875 0.812 0.875 0.862 0.956 0.949 0.838 DDRGK domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34623]
67. F16D3.2 rsd-6 8211 7.024 0.793 0.882 0.836 0.882 0.853 0.966 0.921 0.891
68. B0432.2 djr-1.1 8628 7.024 0.863 0.902 0.798 0.902 0.834 0.965 0.898 0.862 Glutathione-independent glyoxalase DJR-1.1 [Source:UniProtKB/Swiss-Prot;Acc:P90994]
69. F23B2.6 aly-2 7301 7.02 0.771 0.867 0.834 0.867 0.876 0.972 0.960 0.873 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
70. F35G12.10 asb-1 9077 7.017 0.903 0.909 0.805 0.909 0.827 0.959 0.890 0.815 ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_497938]
71. K10B2.1 lin-23 15896 7.017 0.835 0.896 0.844 0.896 0.858 0.951 0.901 0.836 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
72. Y37E3.8 Y37E3.8 71903 7.012 0.895 0.851 0.853 0.851 0.836 0.962 0.899 0.865
73. K01C8.5 gei-14 2094 7.009 0.862 0.864 0.815 0.864 0.902 0.968 0.898 0.836 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_495745]
74. ZK328.5 npp-10 7652 7.007 0.826 0.898 0.796 0.898 0.865 0.952 0.884 0.888 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
75. C09G4.3 cks-1 17852 7.003 0.834 0.875 0.862 0.875 0.884 0.863 0.950 0.860 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
76. Y48B6A.14 hmg-1.1 88723 6.999 0.824 0.870 0.867 0.870 0.838 0.952 0.931 0.847 HMG [Source:RefSeq peptide;Acc:NP_496970]
77. Y71H2AM.17 swsn-3 2806 6.996 0.884 0.858 0.845 0.858 0.851 0.956 0.867 0.877 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_497613]
78. Y38C1AA.2 csn-3 3451 6.993 0.876 0.930 0.895 0.930 0.677 0.872 0.952 0.861 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]
79. R07G3.3 npp-21 3792 6.991 0.754 0.890 0.825 0.890 0.865 0.950 0.923 0.894 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
80. C04A2.7 dnj-5 9618 6.981 0.796 0.900 0.867 0.900 0.812 0.958 0.922 0.826 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
81. Y110A7A.19 let-630 3830 6.981 0.887 0.961 0.793 0.961 0.816 0.855 0.861 0.847
82. C03B8.4 lin-13 7489 6.981 0.868 0.866 0.880 0.866 0.869 0.952 0.887 0.793 Zinc finger protein lin-13 [Source:UniProtKB/Swiss-Prot;Acc:Q11107]
83. T09A5.8 cec-3 5813 6.98 0.737 0.870 0.813 0.870 0.912 0.927 0.954 0.897 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
84. C49C3.7 C49C3.7 3004 6.977 0.817 0.853 0.842 0.853 0.875 0.872 0.958 0.907
85. C38D4.3 mel-28 3515 6.967 0.849 0.875 0.768 0.875 0.883 0.962 0.912 0.843
86. F26A3.3 ego-1 1615 6.966 0.845 0.956 0.772 0.956 0.843 0.855 0.861 0.878 Enhancer of Glp-One (glp-1) [Source:RefSeq peptide;Acc:NP_492132]
87. C39E9.12 C39E9.12 3588 6.964 0.853 0.861 0.819 0.861 0.822 0.974 0.939 0.835
88. R06A4.7 mes-2 2612 6.963 0.778 0.903 0.789 0.903 0.817 0.965 0.903 0.905 Histone-lysine N-methyltransferase mes-2 [Source:UniProtKB/Swiss-Prot;Acc:O17514]
89. R07E5.11 R07E5.11 1170 6.961 0.872 0.955 0.857 0.955 0.864 0.745 0.911 0.802
90. EEED8.16 brap-2 3123 6.956 0.870 0.877 0.831 0.877 0.820 0.910 0.958 0.813 BRCA1-associated protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q95QN6]
91. DY3.2 lmn-1 22449 6.954 0.900 0.915 0.879 0.915 0.781 0.953 0.827 0.784 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
92. Y75B8A.22 tim-1 2124 6.945 0.779 0.872 0.893 0.872 0.896 0.821 0.852 0.960 Protein timeless homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EDN3]
93. F58B3.6 F58B3.6 3464 6.941 0.783 0.951 0.829 0.951 0.808 0.825 0.874 0.920
94. W03B1.4 sars-2 2356 6.938 0.805 0.952 0.851 0.952 0.857 0.766 0.913 0.842 Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
95. ZK1128.5 ham-3 2917 6.937 0.789 0.898 0.844 0.898 0.860 0.955 0.801 0.892
96. C55A6.9 pafo-1 2328 6.935 0.852 0.897 0.818 0.897 0.873 0.950 0.926 0.722 RNA polymerase II-associated factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90783]
97. F55F8.3 F55F8.3 2107 6.934 0.784 0.967 0.819 0.967 0.823 0.772 0.910 0.892 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
98. F26F12.7 let-418 6089 6.933 0.794 0.902 0.749 0.902 0.874 0.879 0.879 0.954
99. R05F9.11 R05F9.11 371 6.931 0.836 0.891 0.800 0.891 0.812 0.931 0.980 0.790
100. Y106G6H.12 duo-3 2619 6.924 0.882 0.880 0.805 0.880 0.748 0.956 0.879 0.894 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_001293463]

There are 97 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA