C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm3, section s28.

Sample reads: 75,555. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 548.00 7253.14 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. C04F12.4 rpl-14 487.00 6445.76 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
3. RIT1P.688 462.00 6114.87
4. F31E3.5 eef-1A.1 450.00 5956.04 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
5. E04A4.7 cyc-2.1 402.00 5320.73 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
6. F36A2.6 rps-15 398.00 5267.79 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
7. Y24D9A.4 rpl-7A 358.00 4738.36 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
8. C49H3.11 rps-2 346.00 4579.54 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
9. B0041.4 rpl-4 335.00 4433.94 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
10. F02A9.3 far-2 335.00 4433.94 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
11. F13B10.2 rpl-3 324.00 4288.35 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
12. W09C5.6 rpl-31 314.00 4155.99 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
13. F11C3.3 unc-54 294.00 3891.28 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
14. T04C12.6 act-1 291.00 3851.57 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
15. B0513.3 rpl-29 288.00 3811.87 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
16. ZC434.2 rps-7 288.00 3811.87 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
17. C42C1.14 rpl-34 282.00 3732.45 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
18. F40F11.1 rps-11 282.00 3732.45 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
19. Y71A12B.1 rps-6 276.00 3653.04 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
20. F10B5.1 rpl-10 273.00 3613.33 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
21. Y105E8A.16 rps-20 270.00 3573.63 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
22. Y71F9AL.13 rpl-1 264.00 3494.21 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
23. T01C3.6 rps-16 256.00 3388.33 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
24. F56E10.4 rps-27 253.00 3348.62 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
25. Y75B12B.2 cyn-7 245.00 3242.73 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
26. T22F3.4 rpl-11.1 243.00 3216.26 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
27. Y82E9BR.3 Y82E9BR.3 243.00 3216.26 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
28. D1007.6 rps-10 238.00 3150.09 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
29. F01G12.5 let-2 238.00 3150.09 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
30. F42C5.8 rps-8 238.00 3150.09 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
31. K02B2.5 rps-25 235.00 3110.38 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
32. R13A5.8 rpl-9 235.00 3110.38 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
33. T04C12.4 act-3 235.00 3110.38 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
34. F52B5.6 rpl-25.2 233.00 3083.91 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
35. F39B2.6 rps-26 225.00 2978.02 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
36. T27E9.1 ant-1.1 225.00 2978.02 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
37. W06H8.8 ttn-1 221.00 2925.08 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
38. C14B9.7 rpl-21 211.00 2792.72 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
39. F40F8.10 rps-9 211.00 2792.72 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
40. K07H8.10 K07H8.10 211.00 2792.72
41. F37C12.4 rpl-36 207.00 2739.78 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
42. F53A3.3 rps-22 198.00 2620.66 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
43. R05G6.7 vdac-1 194.00 2567.72 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
44. F25H2.5 ndk-1 191.00 2528.01 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
45. F07A5.7 unc-15 189.00 2501.54 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
46. C34E10.6 atp-2 187.00 2475.07 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
47. M01F1.2 rpl-16 187.00 2475.07 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
48. T07A9.14 T07A9.14 177.00 2342.71
49. K08D12.3 K08D12.3 175.00 2316.24
50. Y48B6A.2 rpl-43 175.00 2316.24 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
51. F28C6.7 rpl-26 173.00 2289.77 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
52. F54C9.5 rpl-5 171.00 2263.30 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
53. K11H12.2 rpl-15 171.00 2263.30 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
54. C37A2.7 C37A2.7 169.00 2236.83 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
55. C09H10.2 rpl-41 167.00 2210.35 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
56. Y45F10D.12 rpl-18 167.00 2210.35 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
57. C06B8.8 rpl-38 165.00 2183.88 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
58. C56C10.8 icd-1 165.00 2183.88 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
59. F28D1.7 rps-23 165.00 2183.88 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
60. F37C12.9 rps-14 163.00 2157.41 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
61. R09B3.3 R09B3.3 163.00 2157.41
62. C37C3.6 mig-6 162.00 2144.18 Papilin [Source:UniProtKB/Swiss-Prot;Acc:O76840]
63. C44B12.2 ost-1 162.00 2144.18 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
64. F56F3.5 rps-1 162.00 2144.18 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
65. Y106G6H.2 pab-1 162.00 2144.18 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
66. M03F4.2 act-4 160.00 2117.70 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
67. Y18D10A.19 fkb-2 160.00 2117.70 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
68. W01D2.1 W01D2.1 158.00 2091.23 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
69. Y66H1B.3 158.00 2091.23
70. D2096.8 nap-1 154.00 2038.29 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
71. ZK652.4 rpl-35 152.00 2011.82 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
72. RIT6P.22 151.00 1998.58
73. Y48G8AL.8 rpl-17 151.00 1998.58 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
74. Y69A2AR.18 Y69A2AR.18 151.00 1998.58
75. Y113G7B.17 prmt-1 149.00 1972.11 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
76. T25F10.6 clik-1 147.00 1945.64 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
77. ZK1010.1 ubq-2 147.00 1945.64 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
78. T04C12.5 act-2 145.00 1919.17 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
79. R151.3 rpl-6 143.00 1892.70 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
80. F28H1.2 cpn-3 140.00 1852.99 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
81. F10C1.2 ifb-1 138.00 1826.52 Intermediate filament protein ifb-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19289]
82. F53G12.10 rpl-7 138.00 1826.52 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
83. C47E8.11 C47E8.11 135.00 1786.81
84. F33A8.3 cey-1 135.00 1786.81 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
85. Y105E8B.1 lev-11 133.00 1760.34 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
86. Y48B6A.14 hmg-1.1 133.00 1760.34 HMG [Source:RefSeq peptide;Acc:NP_496970]
87. B0393.1 rps-0 130.00 1720.63 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
88. Y37E3.8 Y37E3.8 130.00 1720.63
89. T05F1.3 rps-19 128.00 1694.16 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
90. D1086.10 D1086.10 127.00 1680.93
91. C27A2.2 rpl-22 125.00 1654.46 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
92. B0250.1 rpl-2 122.00 1614.75 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
93. F52H3.7 lec-2 122.00 1614.75 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
94. C26F1.4 rps-30 120.00 1588.28 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
95. F56D12.5 vig-1 120.00 1588.28 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
96. Y65B4BR.5 icd-2 120.00 1588.28 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
97. F25H2.10 rla-0 118.00 1561.81 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
98. C44B12.1 perm-2 117.00 1548.57 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500042]
99. K02F2.2 ahcy-1 117.00 1548.57 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
100. R08C7.3 htz-1 115.00 1522.10 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA