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Results for F01G12.5

Gene ID Gene Name Reads Transcripts Annotation
F01G12.5 let-2 111910 F01G12.5a.1, F01G12.5a.2, F01G12.5b.1, F01G12.5b.2 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]

Genes with expression patterns similar to F01G12.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F01G12.5 let-2 111910 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
2. C44B12.2 ost-1 94127 7.593 0.966 0.962 0.956 0.962 0.922 0.923 0.949 0.953 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
3. K04H4.1 emb-9 32527 7.421 0.939 0.924 0.909 0.924 0.960 0.926 0.925 0.914 Collagen alpha-1(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17139]
4. F11C3.3 unc-54 329739 7.277 0.900 0.855 0.902 0.855 0.952 0.933 0.908 0.972 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
5. F54C1.7 pat-10 205614 7.257 0.866 0.885 0.829 0.885 0.950 0.936 0.939 0.967 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
6. T22E5.5 mup-2 65873 7.255 0.933 0.866 0.853 0.866 0.938 0.944 0.883 0.972 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
7. F52D10.3 ftt-2 101404 7.214 0.830 0.889 0.877 0.889 0.975 0.906 0.898 0.950 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
8. F08B6.4 unc-87 108779 7.208 0.918 0.845 0.855 0.845 0.972 0.966 0.861 0.946 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
9. F07A5.7 unc-15 276610 7.204 0.900 0.874 0.821 0.874 0.955 0.891 0.931 0.958 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
10. C18A11.7 dim-1 110263 7.143 0.870 0.831 0.811 0.831 0.976 0.932 0.923 0.969 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
11. T25F10.6 clik-1 175948 7.11 0.911 0.844 0.864 0.844 0.927 0.846 0.906 0.968 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
12. C05G5.4 sucl-1 31709 7.102 0.828 0.856 0.835 0.856 0.950 0.914 0.930 0.933 Probable succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53596]
13. C03G5.1 sdha-1 32426 7.074 0.891 0.840 0.772 0.840 0.959 0.927 0.940 0.905 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09508]
14. F28H1.2 cpn-3 166879 7.043 0.847 0.807 0.810 0.807 0.945 0.951 0.909 0.967 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
15. T14G12.3 tag-18 22633 7.033 0.885 0.848 0.890 0.848 0.881 0.958 0.772 0.951
16. T04C12.4 act-3 383119 7.003 0.878 0.897 0.874 0.897 0.778 0.822 0.886 0.971 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
17. F53A9.10 tnt-2 113410 6.95 0.872 0.774 0.809 0.774 0.945 0.965 0.866 0.945 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
18. F40E10.3 csq-1 18817 6.944 0.886 0.855 0.721 0.855 0.922 0.952 0.844 0.909 Calsequestrin [Source:RefSeq peptide;Acc:NP_510438]
19. F29B9.11 F29B9.11 85694 6.94 0.917 0.872 0.818 0.872 0.956 0.867 0.708 0.930
20. F46E10.10 mdh-1 38551 6.874 0.814 0.825 0.733 0.825 0.951 0.929 0.896 0.901 Malate dehydrogenase [Source:RefSeq peptide;Acc:NP_504656]
21. Y56A3A.3 mif-1 8994 6.855 0.862 0.866 0.751 0.866 0.943 0.977 0.854 0.736 MIF (Macrophage migration Inhibitory Factor) related [Source:RefSeq peptide;Acc:NP_499536]
22. K11D9.2 sca-1 71133 6.819 0.855 0.811 0.771 0.811 0.897 0.966 0.802 0.906 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
23. Y17G7B.7 tpi-1 19678 6.799 0.858 0.868 0.773 0.868 0.772 0.955 0.838 0.867 Triosephosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q10657]
24. K10B3.9 mai-1 161647 6.799 0.836 0.758 0.643 0.758 0.953 0.959 0.927 0.965 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
25. ZK1067.2 ZK1067.2 3161 6.789 0.878 0.683 0.865 0.683 0.970 0.958 0.814 0.938
26. R148.6 heh-1 40904 6.766 0.897 0.723 0.740 0.723 0.961 0.897 0.874 0.951 Putative protein heh-1 [Source:UniProtKB/Swiss-Prot;Acc:O17271]
27. T04C12.6 act-1 429293 6.763 0.933 0.864 0.841 0.864 0.715 0.794 0.779 0.973 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
28. Y71H10A.1 pfk-1.1 10474 6.731 0.662 0.792 0.813 0.792 0.961 0.952 0.882 0.877 ATP-dependent 6-phosphofructokinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZL8]
29. F54E2.3 ketn-1 28256 6.728 0.847 0.732 0.773 0.732 0.953 0.928 0.842 0.921 KETtiN (Drosophila actin-binding) homolog [Source:RefSeq peptide;Acc:NP_503758]
30. F57B10.3 ipgm-1 32965 6.728 0.851 0.796 0.753 0.796 0.896 0.959 0.757 0.920 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Source:UniProtKB/Swiss-Prot;Acc:G5EFZ1]
31. F02A9.2 far-1 119216 6.699 0.893 0.723 0.740 0.723 0.962 0.829 0.908 0.921 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
32. F56B6.4 gyg-1 39789 6.618 0.869 0.658 0.735 0.658 0.964 0.923 0.843 0.968 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
33. T21B10.2 enol-1 72318 6.591 0.762 0.770 0.731 0.770 0.916 0.954 0.796 0.892 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
34. C54G4.1 rskn-2 10873 6.561 0.927 0.844 0.731 0.844 0.906 0.961 0.708 0.640 Putative ribosomal protein S6 kinase alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18846]
35. F27D9.5 pcca-1 35848 6.523 0.666 0.748 0.729 0.748 0.946 0.967 0.877 0.842 Propionyl-CoA carboxylase alpha chain, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19842]
36. F13D12.2 ldh-1 23786 6.45 0.808 0.650 0.719 0.650 0.934 0.959 0.824 0.906 L-lactate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q27888]
37. Y87G2A.8 gpi-1 18323 6.43 0.589 0.754 0.715 0.754 0.898 0.957 0.856 0.907 Glucose-6-phosphate isomerase [Source:RefSeq peptide;Acc:NP_001021838]
38. F42G4.3 zyx-1 50908 6.369 0.659 0.691 0.666 0.691 0.960 0.951 0.787 0.964 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
39. W09H1.6 lec-1 22667 6.295 0.656 0.723 0.719 0.723 0.857 0.949 0.717 0.951 32 kDa beta-galactoside-binding lectin [Source:UniProtKB/Swiss-Prot;Acc:P36573]
40. T25C12.1 lin-14 7885 6.186 0.874 0.624 0.762 0.624 0.885 0.950 0.737 0.730
41. D2092.6 D2092.6 1738 5.763 0.869 0.176 0.864 0.176 0.969 0.944 0.847 0.918
42. Y79H2A.2 Y79H2A.2 469 5.467 0.901 0.041 0.836 0.041 0.887 0.951 0.899 0.911 Putative uncharacterized protein C51G7.2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECK2]
43. W05G11.6 pck-1 33002 5.369 0.710 0.463 0.312 0.463 0.939 0.951 0.813 0.718 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_497134]
44. T01B7.1 T01B7.1 0 5.25 0.824 - 0.851 - 0.895 0.964 0.793 0.923
45. H37A05.2 H37A05.2 0 5.171 0.829 - 0.687 - 0.905 0.951 0.916 0.883
46. Y71H2B.5 Y71H2B.5 486 5.045 0.736 - 0.561 - 0.940 0.956 0.909 0.943
47. T22F3.7 T22F3.7 0 4.984 0.677 - 0.545 - 0.934 0.956 0.950 0.922

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA