C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for ZK512.2

Gene ID Gene Name Reads Transcripts Annotation
ZK512.2 ZK512.2 6018 ZK512.2a, ZK512.2b Probable ATP-dependent RNA helicase DDX55 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34640]

Genes with expression patterns similar to ZK512.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK512.2 ZK512.2 6018 2 - 1.000 - 1.000 - - - - Probable ATP-dependent RNA helicase DDX55 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34640]
2. Y53C12B.1 Y53C12B.1 4697 1.966 - 0.983 - 0.983 - - - -
3. T23D8.3 T23D8.3 11367 1.966 - 0.983 - 0.983 - - - - Protein LTV1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O02327]
4. W08D2.7 mtr-4 2699 1.966 - 0.983 - 0.983 - - - - mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
5. C16A3.3 let-716 8448 1.964 - 0.982 - 0.982 - - - -
6. C18A3.3 C18A3.3 9387 1.964 - 0.982 - 0.982 - - - - Probable rRNA-processing protein EBP2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09958]
7. T26G10.1 T26G10.1 6838 1.96 - 0.980 - 0.980 - - - - Putative ATP-dependent RNA helicase T26G10.1 [Source:UniProtKB/Swiss-Prot;Acc:P34580]
8. H06I04.3 H06I04.3 14642 1.96 - 0.980 - 0.980 - - - - Putative rRNA methyltransferase [Source:RefSeq peptide;Acc:NP_497655]
9. Y66H1A.4 Y66H1A.4 21122 1.958 - 0.979 - 0.979 - - - - Probable H/ACA ribonucleoprotein complex subunit 1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9TYK1]
10. C16C10.8 C16C10.8 4044 1.958 - 0.979 - 0.979 - - - -
11. Y48B6A.1 Y48B6A.1 7577 1.956 - 0.978 - 0.978 - - - - Ribosome biogenesis protein BOP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A9]
12. C17G10.9 C17G10.9 15207 1.954 - 0.977 - 0.977 - - - - Eukaryotic translation initiation factor 3 subunit L [Source:UniProtKB/Swiss-Prot;Acc:Q95QW0]
13. Y54E5A.5 Y54E5A.5 12375 1.954 - 0.977 - 0.977 - - - -
14. T23D8.4 eif-3.C 15343 1.954 - 0.977 - 0.977 - - - - Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
15. Y54E2A.11 eif-3.B 13795 1.954 - 0.977 - 0.977 - - - - Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
16. Y57A10A.27 Y57A10A.27 2760 1.95 - 0.975 - 0.975 - - - -
17. C28H8.3 C28H8.3 16960 1.95 - 0.975 - 0.975 - - - - Uncharacterized helicase C28H8.3 [Source:UniProtKB/Swiss-Prot;Acc:Q09475]
18. B0511.6 B0511.6 6673 1.95 - 0.975 - 0.975 - - - -
19. Y54E10A.10 Y54E10A.10 9302 1.95 - 0.975 - 0.975 - - - - Ribosome production factor 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F0]
20. F49D11.10 F49D11.10 5801 1.95 - 0.975 - 0.975 - - - -
21. W04C9.4 W04C9.4 7142 1.95 - 0.975 - 0.975 - - - -
22. T23F6.4 rbd-1 5825 1.948 - 0.974 - 0.974 - - - - RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
23. F10G7.1 tag-151 9031 1.948 - 0.974 - 0.974 - - - - Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
24. F53F4.11 F53F4.11 6048 1.946 - 0.973 - 0.973 - - - -
25. Y105E8B.3 riok-2 5531 1.946 - 0.973 - 0.973 - - - - Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
26. T23B12.3 mrps-2 5434 1.946 - 0.973 - 0.973 - - - - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
27. C16A3.6 C16A3.6 11397 1.946 - 0.973 - 0.973 - - - -
28. T27E9.7 abcf-2 40273 1.944 - 0.972 - 0.972 - - - - ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
29. F41H10.10 htp-1 6425 1.944 - 0.972 - 0.972 - - - - Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
30. Y23H5B.6 Y23H5B.6 5886 1.944 - 0.972 - 0.972 - - - -
31. T20B12.3 T20B12.3 1789 1.944 - 0.972 - 0.972 - - - -
32. R08D7.3 eif-3.D 6740 1.944 - 0.972 - 0.972 - - - - Eukaryotic translation initiation factor 3 subunit D [Source:UniProtKB/Swiss-Prot;Acc:P30642]
33. F18C5.3 tag-184 4027 1.942 - 0.971 - 0.971 - - - -
34. F13G3.11 mrpl-13 6024 1.942 - 0.971 - 0.971 - - - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
35. K07C5.4 K07C5.4 24125 1.942 - 0.971 - 0.971 - - - - Uncharacterized NOP5 family protein K07C5.4 [Source:UniProtKB/Swiss-Prot;Acc:Q21276]
36. C25A1.10 dao-5 18351 1.942 - 0.971 - 0.971 - - - - Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
37. C27B7.5 C27B7.5 6331 1.942 - 0.971 - 0.971 - - - -
38. C44E4.4 C44E4.4 17818 1.942 - 0.971 - 0.971 - - - -
39. F32E10.4 ima-3 35579 1.94 - 0.970 - 0.970 - - - - Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
40. T01G9.6 kin-10 27360 1.94 - 0.970 - 0.970 - - - - Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
41. T02G5.9 kars-1 9763 1.94 - 0.970 - 0.970 - - - - Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
42. K07H8.10 K07H8.10 55725 1.94 - 0.970 - 0.970 - - - -
43. T06E6.1 T06E6.1 5531 1.94 - 0.970 - 0.970 - - - -
44. F55A12.8 nath-10 4253 1.94 - 0.970 - 0.970 - - - - N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
45. Y65B4BR.5 icd-2 58321 1.94 - 0.970 - 0.970 - - - - Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
46. T12E12.3 T12E12.3 3844 1.938 - 0.969 - 0.969 - - - -
47. Y50D7A.9 taco-1 5949 1.938 - 0.969 - 0.969 - - - - Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
48. ZK792.5 ZK792.5 2827 1.938 - 0.969 - 0.969 - - - -
49. T21G5.3 glh-1 16470 1.936 - 0.968 - 0.968 - - - - ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
50. K01G5.5 K01G5.5 24521 1.936 - 0.968 - 0.968 - - - - Putative H/ACA ribonucleoprotein complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O17919]
51. F07E5.5 F07E5.5 3088 1.936 - 0.968 - 0.968 - - - -
52. K08F4.2 gtbp-1 25222 1.936 - 0.968 - 0.968 - - - - ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
53. F42A10.1 abcf-3 5557 1.936 - 0.968 - 0.968 - - - - ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
54. C26F1.3 C26F1.3 4788 1.936 - 0.968 - 0.968 - - - -
55. F22B5.9 fars-3 7209 1.934 - 0.967 - 0.967 - - - - Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
56. K08F11.3 cif-1 10218 1.934 - 0.967 - 0.967 - - - - COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
57. F59A2.3 cri-3 15077 1.934 - 0.967 - 0.967 - - - - Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
58. K07A1.10 K07A1.10 5337 1.934 - 0.967 - 0.967 - - - -
59. F46A9.4 skr-2 16831 1.932 - 0.966 - 0.966 - - - - SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
60. R02F2.7 R02F2.7 3263 1.932 - 0.966 - 0.966 - - - -
61. K08D12.3 K08D12.3 66743 1.932 - 0.966 - 0.966 - - - -
62. F31D4.3 fkb-6 21313 1.932 - 0.966 - 0.966 - - - - FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
63. R12E2.12 mrps-6 4708 1.932 - 0.966 - 0.966 - - - - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_491318]
64. Y113G7B.17 prmt-1 43709 1.932 - 0.966 - 0.966 - - - - PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
65. W01B11.3 nol-5 23544 1.93 - 0.965 - 0.965 - - - - NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
66. T04A8.6 T04A8.6 10159 1.93 - 0.965 - 0.965 - - - -
67. T11G6.1 hars-1 7908 1.93 - 0.965 - 0.965 - - - - Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
68. Y18D10A.19 fkb-2 48128 1.93 - 0.965 - 0.965 - - - - Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
69. C34E10.5 prmt-5 12277 1.93 - 0.965 - 0.965 - - - - Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
70. Y54H5A.1 Y54H5A.1 12787 1.93 - 0.965 - 0.965 - - - -
71. C27D11.1 egl-45 28282 1.93 - 0.965 - 0.965 - - - - Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
72. Y73B6BL.32 lsm-8 11002 1.93 - 0.965 - 0.965 - - - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
73. H06H21.3 eif-1.A 40990 1.93 - 0.965 - 0.965 - - - - Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
74. C05D11.10 mrps-17 4613 1.93 - 0.965 - 0.965 - - - - 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
75. Y51H4A.15 Y51H4A.15 4482 1.93 - 0.965 - 0.965 - - - -
76. C36E8.1 C36E8.1 14101 1.93 - 0.965 - 0.965 - - - -
77. Y48A6B.3 Y48A6B.3 16235 1.928 - 0.964 - 0.964 - - - - Putative H/ACA ribonucleoprotein complex subunit 2-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9XXD4]
78. C14A4.4 crn-3 6558 1.928 - 0.964 - 0.964 - - - - Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
79. T07A9.9 nog-1 19728 1.928 - 0.964 - 0.964 - - - - Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
80. C15H11.9 rrbs-1 9177 1.928 - 0.964 - 0.964 - - - - Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
81. W03B1.4 sars-2 2356 1.928 - 0.964 - 0.964 - - - - Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
82. C41D11.2 eif-3.H 7520 1.928 - 0.964 - 0.964 - - - - Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
83. CD4.8 CD4.8 2750 1.926 - 0.963 - 0.963 - - - -
84. T20H4.3 pars-1 8167 1.926 - 0.963 - 0.963 - - - - Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
85. T24C4.1 ucr-2.3 7057 1.926 - 0.963 - 0.963 - - - - Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_497284]
86. Y67D8C.5 eel-1 30623 1.926 - 0.963 - 0.963 - - - - Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
87. T26A5.3 nduf-2.2 3133 1.926 - 0.963 - 0.963 - - - - NADH Ubiquinone oxidoreductase Fe-S protein [Source:RefSeq peptide;Acc:NP_498423]
88. C37H5.5 C37H5.5 3546 1.924 - 0.962 - 0.962 - - - - Nucleolar complex protein 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91136]
89. Y45F10D.7 Y45F10D.7 3250 1.924 - 0.962 - 0.962 - - - -
90. Y59A8B.6 prp-6 2907 1.924 - 0.962 - 0.962 - - - - yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_507525]
91. T21C9.12 scpl-4 14723 1.924 - 0.962 - 0.962 - - - - Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
92. C06A1.5 rpb-6 7515 1.924 - 0.962 - 0.962 - - - - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
93. B0035.12 sart-3 7188 1.924 - 0.962 - 0.962 - - - - human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
94. F55F8.3 F55F8.3 2107 1.924 - 0.962 - 0.962 - - - - Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
95. T21B10.1 mrpl-50 14595 1.924 - 0.962 - 0.962 - - - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
96. D2013.7 eif-3.F 21004 1.924 - 0.962 - 0.962 - - - - Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
97. F42A10.5 F42A10.5 13872 1.924 - 0.962 - 0.962 - - - -
98. D2030.6 prg-1 26751 1.924 - 0.962 - 0.962 - - - - Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
99. Y39G10AR.8 Y39G10AR.8 11178 1.922 - 0.961 - 0.961 - - - -
100. T19A6.2 ngp-1 5884 1.922 - 0.961 - 0.961 - - - - Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]

There are 159 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA