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Results for Y55F3AM.15

Gene ID Gene Name Reads Transcripts Annotation
Y55F3AM.15 csn-4 1190 Y55F3AM.15 COP9 signalosome complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N359]

Genes with expression patterns similar to Y55F3AM.15

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y55F3AM.15 csn-4 1190 7 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - COP9 signalosome complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N359]
2. T10F2.4 prp-19 11298 6.566 0.909 0.939 0.952 0.939 0.932 0.960 0.935 - Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
3. F23F1.1 nfyc-1 9983 6.556 0.881 0.946 0.941 0.946 0.968 0.915 0.959 - Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
4. F33D4.5 mrpl-1 5337 6.543 0.881 0.946 0.956 0.946 0.955 0.933 0.926 - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
5. W02B12.3 rsp-1 9235 6.537 0.890 0.933 0.960 0.933 0.903 0.940 0.978 - Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
6. C52E4.6 cyl-1 6405 6.535 0.887 0.933 0.975 0.933 0.921 0.958 0.928 - CYclin L [Source:RefSeq peptide;Acc:NP_506007]
7. T06A10.4 lsy-13 7631 6.533 0.933 0.951 0.942 0.951 0.923 0.927 0.906 -
8. C08B11.5 sap-49 10553 6.533 0.870 0.958 0.920 0.958 0.934 0.946 0.947 - Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
9. Y71F9B.16 dnj-30 4262 6.527 0.921 0.940 0.947 0.940 0.926 0.884 0.969 - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
10. Y102A5A.1 cand-1 11808 6.521 0.913 0.956 0.931 0.956 0.913 0.921 0.931 - Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
11. T21B10.4 T21B10.4 11648 6.517 0.872 0.933 0.939 0.933 0.941 0.939 0.960 -
12. C06A5.1 inst-1 5068 6.513 0.896 0.944 0.960 0.944 0.899 0.921 0.949 - INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
13. F33H1.4 F33H1.4 2447 6.513 0.892 0.948 0.967 0.948 0.904 0.919 0.935 -
14. Y46G5A.4 snrp-200 13827 6.513 0.858 0.938 0.949 0.938 0.950 0.913 0.967 - Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
15. Y54E5A.4 npp-4 6288 6.512 0.911 0.950 0.931 0.950 0.937 0.929 0.904 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
16. F56A8.6 cpf-2 2730 6.509 0.878 0.953 0.954 0.953 0.928 0.920 0.923 - Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
17. C18D11.4 rsp-8 18308 6.508 0.868 0.950 0.917 0.950 0.908 0.954 0.961 - SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
18. F10G8.3 rae-1 7542 6.507 0.932 0.927 0.943 0.927 0.937 0.891 0.950 - mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
19. R13F6.10 cra-1 11610 6.503 0.896 0.933 0.920 0.933 0.932 0.932 0.957 - N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
20. C09G4.3 cks-1 17852 6.503 0.854 0.942 0.932 0.942 0.929 0.978 0.926 - Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
21. F56D2.6 ddx-15 12282 6.499 0.870 0.940 0.935 0.940 0.916 0.927 0.971 - Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
22. Y43F4B.4 npp-18 4780 6.498 0.867 0.943 0.932 0.943 0.971 0.921 0.921 - Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
23. F46B6.3 smg-4 4959 6.497 0.892 0.930 0.922 0.930 0.914 0.976 0.933 - Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
24. F56F3.1 ifet-1 25772 6.493 0.953 0.919 0.934 0.919 0.940 0.926 0.902 - Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
25. F32H2.4 thoc-3 3861 6.492 0.839 0.954 0.946 0.954 0.941 0.926 0.932 - THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
26. H19N07.1 erfa-3 19869 6.491 0.870 0.935 0.925 0.935 0.927 0.931 0.968 - Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
27. W09C5.7 W09C5.7 2359 6.49 0.913 0.931 0.915 0.931 0.939 0.910 0.951 -
28. F26A3.1 F26A3.1 5671 6.49 0.873 0.953 0.932 0.953 0.949 0.916 0.914 -
29. R144.7 larp-1 24669 6.49 0.893 0.922 0.919 0.922 0.956 0.929 0.949 - La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
30. T12E12.2 cec-6 4758 6.49 0.902 0.937 0.936 0.937 0.954 0.945 0.879 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
31. C43E11.1 acin-1 7781 6.489 0.881 0.931 0.948 0.931 0.915 0.919 0.964 - ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
32. C15F1.4 ppp-1 1774 6.486 0.903 0.930 0.886 0.930 0.955 0.926 0.956 - Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
33. B0464.2 ctr-9 7610 6.485 0.841 0.940 0.963 0.940 0.922 0.919 0.960 - RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
34. F22D6.3 nars-1 18624 6.483 0.863 0.933 0.933 0.933 0.926 0.932 0.963 - Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
35. F25B5.2 nop-1 4127 6.482 0.842 0.933 0.960 0.933 0.944 0.923 0.947 - Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
36. C53D5.6 imb-3 28921 6.48 0.883 0.937 0.922 0.937 0.919 0.914 0.968 - IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
37. F28B3.7 him-1 18274 6.48 0.859 0.924 0.946 0.924 0.932 0.930 0.965 - Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
38. C18E9.6 tomm-40 13426 6.48 0.912 0.925 0.894 0.925 0.927 0.941 0.956 - Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
39. C50C3.6 prp-8 19582 6.48 0.880 0.940 0.928 0.940 0.904 0.954 0.934 - Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
40. T08B2.9 fars-1 12650 6.479 0.899 0.935 0.894 0.935 0.956 0.910 0.950 - Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
41. K03B4.2 K03B4.2 21796 6.477 0.888 0.935 0.925 0.935 0.929 0.955 0.910 -
42. Y54E2A.3 tac-1 6308 6.477 0.841 0.936 0.914 0.936 0.955 0.961 0.934 - TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
43. T05C3.5 dnj-19 20420 6.475 0.849 0.926 0.935 0.926 0.923 0.963 0.953 - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
44. F32E10.6 cec-5 10643 6.474 0.842 0.948 0.951 0.948 0.917 0.903 0.965 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
45. Y17G7A.1 hmg-12 29989 6.473 0.901 0.923 0.935 0.923 0.897 0.939 0.955 - HMG [Source:RefSeq peptide;Acc:NP_496544]
46. Y65B4BL.2 deps-1 18277 6.473 0.830 0.931 0.946 0.931 0.917 0.947 0.971 -
47. Y105E8A.17 ekl-4 4732 6.472 0.842 0.950 0.944 0.950 0.925 0.934 0.927 -
48. F28B3.8 imb-1 7515 6.471 0.842 0.952 0.920 0.952 0.969 0.889 0.947 - IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
49. R12C12.2 ran-5 14517 6.47 0.880 0.951 0.943 0.951 0.917 0.912 0.916 - associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
50. Y54E10A.9 vbh-1 28746 6.47 0.914 0.937 0.906 0.937 0.879 0.936 0.961 - Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
51. F36A2.1 cids-2 4551 6.47 0.831 0.937 0.941 0.937 0.909 0.960 0.955 - pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
52. F54D5.8 dnj-13 18315 6.469 0.898 0.921 0.921 0.921 0.907 0.952 0.949 - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_496468]
53. ZK1098.8 mut-7 4940 6.469 0.852 0.934 0.964 0.934 0.939 0.924 0.922 - Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
54. K11D12.2 pqn-51 15951 6.469 0.892 0.952 0.932 0.952 0.950 0.909 0.882 - Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
55. B0035.3 B0035.3 4118 6.468 0.831 0.931 0.937 0.931 0.924 0.954 0.960 -
56. Y71D11A.2 smr-1 4976 6.468 0.836 0.939 0.945 0.939 0.924 0.967 0.918 - SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
57. T19B4.2 npp-7 13073 6.467 0.881 0.963 0.917 0.963 0.928 0.903 0.912 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
58. T05H10.2 apn-1 5628 6.466 0.865 0.940 0.953 0.940 0.883 0.934 0.951 - DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
59. C05C8.6 hpo-9 8263 6.465 0.851 0.931 0.968 0.931 0.924 0.932 0.928 -
60. F56D1.7 daz-1 23684 6.465 0.882 0.935 0.962 0.935 0.913 0.902 0.936 - DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
61. K08E3.8 mdt-29 4678 6.464 0.898 0.938 0.940 0.938 0.902 0.898 0.950 - Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
62. ZK328.2 eftu-2 7040 6.464 0.855 0.932 0.949 0.932 0.928 0.912 0.956 - Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
63. F46A9.4 skr-2 16831 6.464 0.896 0.924 0.955 0.924 0.909 0.918 0.938 - SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
64. C24G6.1 syp-2 2843 6.463 0.915 0.881 0.944 0.881 0.953 0.932 0.957 -
65. K08F11.3 cif-1 10218 6.463 0.900 0.925 0.900 0.925 0.924 0.924 0.965 - COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
66. T12D8.8 hip-1 18283 6.463 0.858 0.937 0.924 0.937 0.912 0.939 0.956 - Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
67. T10C6.4 srx-44 8454 6.463 0.889 0.930 0.972 0.930 0.888 0.932 0.922 - Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
68. B0035.11 leo-1 2968 6.462 0.903 0.930 0.939 0.930 0.911 0.899 0.950 - RNA polymerase-associated protein LEO1 [Source:UniProtKB/Swiss-Prot;Acc:Q17431]
69. T16G1.11 eif-3.K 14014 6.462 0.904 0.917 0.887 0.917 0.919 0.951 0.967 - Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
70. C08B11.6 arp-6 4646 6.462 0.897 0.914 0.926 0.914 0.912 0.939 0.960 - Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
71. T04A8.10 sel-13 3109 6.46 0.821 0.926 0.953 0.926 0.940 0.925 0.969 - Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
72. W01G7.3 rpb-11 7826 6.46 0.870 0.925 0.958 0.925 0.908 0.943 0.931 - Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
73. C18G1.4 pgl-3 5291 6.46 0.910 0.930 0.940 0.930 0.898 0.951 0.901 - PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
74. D2023.6 D2023.6 5595 6.456 0.924 0.955 0.880 0.955 0.884 0.942 0.916 -
75. R09B3.5 mag-1 7496 6.456 0.870 0.926 0.959 0.926 0.959 0.923 0.893 - Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
76. K02F3.11 rnp-5 6205 6.456 0.813 0.959 0.955 0.959 0.949 0.914 0.907 - RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
77. W02D9.1 pri-2 6048 6.455 0.842 0.937 0.961 0.937 0.940 0.870 0.968 - DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
78. F32H2.1 snpc-4 7581 6.455 0.875 0.934 0.955 0.934 0.914 0.904 0.939 - snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
79. T03F6.2 dnj-17 3150 6.452 0.850 0.944 0.913 0.944 0.959 0.885 0.957 - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_499759]
80. H12I13.4 fbf-1 5587 6.451 0.881 0.917 0.964 0.917 0.945 0.905 0.922 - Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
81. Y54E5B.3 let-49 2437 6.451 0.902 0.927 0.955 0.927 0.917 0.928 0.895 - Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]
82. T02G5.9 kars-1 9763 6.45 0.938 0.913 0.886 0.913 0.958 0.925 0.917 - Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
83. C27B7.1 spr-2 14958 6.45 0.829 0.941 0.957 0.941 0.914 0.931 0.937 - Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
84. F10C2.2 kup-1 3852 6.449 0.768 0.943 0.967 0.943 0.940 0.937 0.951 -
85. C33H5.12 rsp-6 23342 6.449 0.816 0.930 0.938 0.930 0.939 0.939 0.957 - Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
86. C18G1.5 hil-4 21692 6.449 0.805 0.953 0.941 0.953 0.914 0.919 0.964 - Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
87. C06E7.1 sams-3 26921 6.449 0.874 0.920 0.924 0.920 0.912 0.925 0.974 - Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
88. F37E3.1 ncbp-1 5649 6.449 0.845 0.925 0.953 0.925 0.896 0.948 0.957 - Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
89. T26A5.5 jhdm-1 12698 6.448 0.865 0.935 0.956 0.935 0.943 0.894 0.920 - JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
90. Y61A9LA.8 sut-2 11388 6.448 0.875 0.925 0.933 0.925 0.918 0.902 0.970 - Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
91. E01A2.4 let-504 9788 6.447 0.871 0.928 0.930 0.928 0.953 0.912 0.925 -
92. F54C8.5 rheb-1 6358 6.446 0.874 0.926 0.956 0.926 0.926 0.955 0.883 - GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
93. C26D10.2 hel-1 28697 6.446 0.873 0.924 0.887 0.924 0.893 0.976 0.969 - Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
94. T12D8.2 drr-2 16208 6.445 0.827 0.938 0.935 0.938 0.908 0.938 0.961 - Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
95. B0041.7 xnp-1 9187 6.445 0.849 0.931 0.942 0.931 0.887 0.947 0.958 - Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
96. Y71G12B.9 lin-65 7476 6.443 0.870 0.941 0.953 0.941 0.946 0.909 0.883 - LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
97. F36F2.3 rbpl-1 15376 6.443 0.855 0.939 0.943 0.939 0.934 0.875 0.958 - Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
98. K03H1.2 mog-1 4057 6.443 0.814 0.934 0.940 0.934 0.954 0.911 0.956 - Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
99. Y41D4B.12 set-23 2590 6.442 0.942 0.960 0.951 0.960 0.926 0.833 0.870 - Probable histone-lysine N-methyltransferase set-23 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y12]
100. ZK856.12 hpo-40 7855 6.442 0.899 0.910 0.958 0.910 0.908 0.921 0.936 -

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA