C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for F56D2.2

Gene ID Gene Name Reads Transcripts Annotation
F56D2.2 F56D2.2 1341 F56D2.2

Genes with expression patterns similar to F56D2.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56D2.2 F56D2.2 1341 2 - 1.000 - 1.000 - - - -
2. K01D12.6 K01D12.6 3014 1.948 - 0.974 - 0.974 - - - -
3. T23B5.1 prmt-3 10677 1.934 - 0.967 - 0.967 - - - - PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
4. Y62E10A.11 mdt-9 5971 1.928 - 0.964 - 0.964 - - - - MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
5. B0035.3 B0035.3 4118 1.928 - 0.964 - 0.964 - - - -
6. T23H2.1 npp-12 12425 1.928 - 0.964 - 0.964 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
7. F39H11.1 F39H11.1 2901 1.926 - 0.963 - 0.963 - - - -
8. F59E12.11 sam-4 8179 1.926 - 0.963 - 0.963 - - - -
9. F23F12.6 rpt-3 6433 1.924 - 0.962 - 0.962 - - - - Probable 26S protease regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502]
10. W07E6.4 prp-21 1799 1.924 - 0.962 - 0.962 - - - - yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_493746]
11. R11A8.4 sir-2.1 1895 1.924 - 0.962 - 0.962 - - - - NAD-dependent protein deacetylase sir-2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q21921]
12. ZK20.5 rpn-12 9173 1.924 - 0.962 - 0.962 - - - - 26S proteasome non-ATPase regulatory subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q23449]
13. F42A9.8 F42A9.8 3593 1.924 - 0.962 - 0.962 - - - -
14. T14B4.3 T14B4.3 2875 1.924 - 0.962 - 0.962 - - - -
15. K01G5.4 ran-1 32379 1.924 - 0.962 - 0.962 - - - - GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
16. Y49E10.19 ani-1 12757 1.924 - 0.962 - 0.962 - - - - Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
17. C16A11.3 C16A11.3 3250 1.924 - 0.962 - 0.962 - - - -
18. W10C6.1 mat-2 2312 1.922 - 0.961 - 0.961 - - - - Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_496383]
19. T04A8.14 emb-5 11746 1.922 - 0.961 - 0.961 - - - - Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
20. Y39G10AR.14 mcm-4 4312 1.92 - 0.960 - 0.960 - - - - yeast MCM (licensing factor) related [Source:RefSeq peptide;Acc:NP_001293322]
21. T02H6.2 thoc-1 1251 1.92 - 0.960 - 0.960 - - - - THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_493796]
22. T05H10.1 T05H10.1 13896 1.918 - 0.959 - 0.959 - - - - Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_495686]
23. D1081.8 cdc-5L 8553 1.918 - 0.959 - 0.959 - - - - Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
24. C15H11.3 nxf-1 9528 1.918 - 0.959 - 0.959 - - - - Nuclear RNA export factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS7]
25. B0205.1 B0205.1 2403 1.918 - 0.959 - 0.959 - - - -
26. H35B03.2 H35B03.2 3335 1.918 - 0.959 - 0.959 - - - -
27. C02F5.3 C02F5.3 8669 1.918 - 0.959 - 0.959 - - - - Uncharacterized GTP-binding protein C02F5.3 [Source:UniProtKB/Swiss-Prot;Acc:P34280]
28. F53H1.1 F53H1.1 3974 1.918 - 0.959 - 0.959 - - - -
29. R144.6 R144.6 4213 1.918 - 0.959 - 0.959 - - - - Transmembrane protein 144 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q10000]
30. C06A8.2 snpc-1.1 1378 1.918 - 0.959 - 0.959 - - - - SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_495636]
31. F26F4.11 rpb-8 7601 1.918 - 0.959 - 0.959 - - - - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
32. Y106G6H.8 Y106G6H.8 7319 1.918 - 0.959 - 0.959 - - - -
33. F58A4.10 ubc-7 29547 1.918 - 0.959 - 0.959 - - - - Probable ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:P34477]
34. D2013.2 wdfy-2 7286 1.916 - 0.958 - 0.958 - - - - WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
35. C44B7.2 C44B7.2 3742 1.914 - 0.957 - 0.957 - - - -
36. T22C1.1 T22C1.1 7329 1.914 - 0.957 - 0.957 - - - -
37. C03D6.4 npp-14 4889 1.914 - 0.957 - 0.957 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
38. ZK742.1 xpo-1 20741 1.914 - 0.957 - 0.957 - - - - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
39. W03H9.4 cacn-1 2370 1.912 - 0.956 - 0.956 - - - - Cactin [Source:UniProtKB/Swiss-Prot;Acc:G5EG14]
40. T10B5.6 knl-3 3516 1.912 - 0.956 - 0.956 - - - - Kinetochore NuLl [Source:RefSeq peptide;Acc:NP_503520]
41. Y59A8B.10 Y59A8B.10 5873 1.912 - 0.956 - 0.956 - - - -
42. C34E10.2 gop-2 5684 1.912 - 0.956 - 0.956 - - - - GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
43. Y37E3.15 npp-13 7250 1.912 - 0.956 - 0.956 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
44. F37A4.9 bath-41 2558 1.912 - 0.956 - 0.956 - - - - BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
45. B0205.3 rpn-10 16966 1.912 - 0.956 - 0.956 - - - - proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
46. F23C8.6 did-2 4233 1.912 - 0.956 - 0.956 - - - - Doa4-Independent Degradation, homologous to yeast Did2 [Source:RefSeq peptide;Acc:NP_490974]
47. Y87G2A.10 vps-28 3403 1.91 - 0.955 - 0.955 - - - - Vacuolar protein sorting-associated protein 28 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NA26]
48. R02F2.1 R02F2.1 84065 1.91 - 0.955 - 0.955 - - - -
49. F26H11.2 nurf-1 13015 1.91 - 0.955 - 0.955 - - - - Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
50. E02H1.3 tag-124 2189 1.91 - 0.955 - 0.955 - - - - Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
51. Y113G7B.23 swsn-1 13766 1.91 - 0.955 - 0.955 - - - - SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
52. ZK652.6 ZK652.6 2568 1.91 - 0.955 - 0.955 - - - -
53. Y37D8A.11 cec-7 8801 1.91 - 0.955 - 0.955 - - - - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
54. K12D12.1 top-2 18694 1.91 - 0.955 - 0.955 - - - - Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
55. Y49E10.6 his-72 32293 1.91 - 0.955 - 0.955 - - - - Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
56. F40F8.9 lsm-1 5917 1.91 - 0.955 - 0.955 - - - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_496385]
57. H21P03.1 mbf-1 25586 1.91 - 0.955 - 0.955 - - - - MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
58. K07A1.9 K07A1.9 2574 1.91 - 0.955 - 0.955 - - - - Arginyl-tRNA--protein transferase 1 [Source:RefSeq peptide;Acc:NP_492549]
59. F48E8.5 paa-1 39773 1.91 - 0.955 - 0.955 - - - - Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]
60. W01G7.4 W01G7.4 2906 1.91 - 0.955 - 0.955 - - - -
61. K08D12.1 pbs-1 21677 1.91 - 0.955 - 0.955 - - - - Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
62. F10G8.3 rae-1 7542 1.908 - 0.954 - 0.954 - - - - mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
63. Y71G12B.1 chaf-2 3451 1.908 - 0.954 - 0.954 - - - - CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
64. F54D5.2 F54D5.2 2566 1.908 - 0.954 - 0.954 - - - -
65. B0285.4 B0285.4 3474 1.908 - 0.954 - 0.954 - - - - Probable leucine carboxyl methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46554]
66. Y102E9.2 Y102E9.2 15286 1.908 - 0.954 - 0.954 - - - - tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q23232]
67. T24H10.3 dnj-23 11446 1.906 - 0.953 - 0.953 - - - - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
68. T22C1.6 T22C1.6 4918 1.906 - 0.953 - 0.953 - - - -
69. ZC168.3 orc-5 2186 1.906 - 0.953 - 0.953 - - - - ORC (Origin Recognition Complex) subunit [Source:RefSeq peptide;Acc:NP_001255506]
70. T22D1.3 T22D1.3 15552 1.906 - 0.953 - 0.953 - - - - Inosine-5'-monophosphate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH3]
71. C08B11.2 hda-2 2313 1.906 - 0.953 - 0.953 - - - - Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
72. F09G2.2 F09G2.2 14924 1.906 - 0.953 - 0.953 - - - -
73. T07C4.3 T07C4.3 18064 1.906 - 0.953 - 0.953 - - - -
74. F20G4.3 nmy-2 27210 1.906 - 0.953 - 0.953 - - - - Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
75. ZK632.1 mcm-6 9164 1.906 - 0.953 - 0.953 - - - - DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
76. F55A3.3 F55A3.3 15671 1.906 - 0.953 - 0.953 - - - - FACT complex subunit spt-16 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5R9]
77. H02I12.1 cbd-1 54348 1.906 - 0.953 - 0.953 - - - - Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
78. Y39A1B.3 dpy-28 4459 1.906 - 0.953 - 0.953 - - - - Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
79. B0495.8 B0495.8 2064 1.906 - 0.953 - 0.953 - - - -
80. F36D4.3 hum-2 16493 1.906 - 0.953 - 0.953 - - - - Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
81. W01B6.9 ndc-80 4670 1.906 - 0.953 - 0.953 - - - - Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
82. W09C3.4 W09C3.4 4058 1.906 - 0.953 - 0.953 - - - - Probable DNA-directed RNA polymerase III subunit RPC6 [Source:UniProtKB/Swiss-Prot;Acc:P91529]
83. F53F4.3 tbcb-1 6442 1.904 - 0.952 - 0.952 - - - - Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
84. Y50D4A.1 Y50D4A.1 2766 1.904 - 0.952 - 0.952 - - - -
85. C33F10.14 C33F10.14 3165 1.904 - 0.952 - 0.952 - - - -
86. R53.6 psf-1 4721 1.904 - 0.952 - 0.952 - - - - Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
87. C55A6.9 pafo-1 2328 1.904 - 0.952 - 0.952 - - - - RNA polymerase II-associated factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90783]
88. W02F12.6 sna-1 7338 1.904 - 0.952 - 0.952 - - - - Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
89. E04D5.1 E04D5.1 17275 1.904 - 0.952 - 0.952 - - - - Eukaryotic translation initiation factor 2A [Source:UniProtKB/Swiss-Prot;Acc:Q19052]
90. C43E11.1 acin-1 7781 1.904 - 0.952 - 0.952 - - - - ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
91. Y49A3A.1 cept-2 8916 1.904 - 0.952 - 0.952 - - - - Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
92. D1022.7 aka-1 10681 1.904 - 0.952 - 0.952 - - - - A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
93. Y25C1A.8 Y25C1A.8 3287 1.904 - 0.952 - 0.952 - - - - Zinc finger Ran-binding domain-containing protein 2 [Source:RefSeq peptide;Acc:NP_494440]
94. C50B8.3 nuaf-1 2775 1.904 - 0.952 - 0.952 - - - - Probable complex I intermediate-associated protein 30, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q18726]
95. T09F3.2 T09F3.2 13990 1.902 - 0.951 - 0.951 - - - - Carrier protein (C2); Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEG6]
96. C39E9.13 rfc-3 9443 1.902 - 0.951 - 0.951 - - - - RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
97. F12F6.7 F12F6.7 5217 1.902 - 0.951 - 0.951 - - - - Probable DNA polymerase delta small subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19366]
98. Y18D10A.16 Y18D10A.16 2881 1.902 - 0.951 - 0.951 - - - -
99. Y17G7A.1 hmg-12 29989 1.902 - 0.951 - 0.951 - - - - HMG [Source:RefSeq peptide;Acc:NP_496544]
100. H38K22.1 evl-14 3704 1.902 - 0.951 - 0.951 - - - -

There are 19 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA