C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for F53H1.1

Gene ID Gene Name Reads Transcripts Annotation
F53H1.1 F53H1.1 3974 F53H1.1a, F53H1.1b, F53H1.1c, F53H1.1d, F53H1.1e

Genes with expression patterns similar to F53H1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F53H1.1 F53H1.1 3974 2 - 1.000 - 1.000 - - - -
2. Y62E10A.11 mdt-9 5971 1.96 - 0.980 - 0.980 - - - - MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
3. ZK1236.7 ufbp-1 6217 1.96 - 0.980 - 0.980 - - - - DDRGK domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34623]
4. K08E3.8 mdt-29 4678 1.952 - 0.976 - 0.976 - - - - Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
5. Y17G7A.1 hmg-12 29989 1.95 - 0.975 - 0.975 - - - - HMG [Source:RefSeq peptide;Acc:NP_496544]
6. C43E11.1 acin-1 7781 1.95 - 0.975 - 0.975 - - - - ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
7. F26F4.11 rpb-8 7601 1.95 - 0.975 - 0.975 - - - - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
8. T08B2.5 T08B2.5 4823 1.95 - 0.975 - 0.975 - - - -
9. Y53C12B.3 nos-3 20231 1.95 - 0.975 - 0.975 - - - - NanOS related [Source:RefSeq peptide;Acc:NP_496101]
10. H21P03.1 mbf-1 25586 1.948 - 0.974 - 0.974 - - - - MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
11. C53D5.6 imb-3 28921 1.948 - 0.974 - 0.974 - - - - IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
12. C17E4.5 pabp-2 12843 1.948 - 0.974 - 0.974 - - - - PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
13. C08B11.2 hda-2 2313 1.948 - 0.974 - 0.974 - - - - Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
14. T23H2.1 npp-12 12425 1.948 - 0.974 - 0.974 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
15. B0041.7 xnp-1 9187 1.948 - 0.974 - 0.974 - - - - Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
16. Y71G12B.13 Y71G12B.13 6205 1.946 - 0.973 - 0.973 - - - -
17. C17G10.2 C17G10.2 2288 1.946 - 0.973 - 0.973 - - - -
18. T10F2.4 prp-19 11298 1.946 - 0.973 - 0.973 - - - - Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
19. T05H10.1 T05H10.1 13896 1.946 - 0.973 - 0.973 - - - - Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_495686]
20. T22D1.3 T22D1.3 15552 1.946 - 0.973 - 0.973 - - - - Inosine-5'-monophosphate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH3]
21. R144.6 R144.6 4213 1.944 - 0.972 - 0.972 - - - - Transmembrane protein 144 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q10000]
22. W06E11.4 sbds-1 6701 1.944 - 0.972 - 0.972 - - - - Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
23. C06E7.1 sams-3 26921 1.944 - 0.972 - 0.972 - - - - Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
24. R05D11.4 R05D11.4 2590 1.944 - 0.972 - 0.972 - - - -
25. T09E8.2 him-17 4153 1.944 - 0.972 - 0.972 - - - - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
26. E01A2.4 let-504 9788 1.944 - 0.972 - 0.972 - - - -
27. Y37E3.15 npp-13 7250 1.942 - 0.971 - 0.971 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
28. D1081.8 cdc-5L 8553 1.942 - 0.971 - 0.971 - - - - Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
29. F55A3.3 F55A3.3 15671 1.942 - 0.971 - 0.971 - - - - FACT complex subunit spt-16 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5R9]
30. ZK381.4 pgl-1 20651 1.942 - 0.971 - 0.971 - - - - P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
31. C26E6.4 rpb-2 7053 1.942 - 0.971 - 0.971 - - - - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
32. B0464.5 spk-1 35112 1.942 - 0.971 - 0.971 - - - - Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
33. H35B03.2 H35B03.2 3335 1.942 - 0.971 - 0.971 - - - -
34. T16G1.11 eif-3.K 14014 1.94 - 0.970 - 0.970 - - - - Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
35. K08D12.1 pbs-1 21677 1.94 - 0.970 - 0.970 - - - - Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
36. F18E2.3 scc-3 13464 1.94 - 0.970 - 0.970 - - - - Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
37. K01G5.4 ran-1 32379 1.94 - 0.970 - 0.970 - - - - GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
38. C35B1.2 C35B1.2 3412 1.94 - 0.970 - 0.970 - - - -
39. M01B12.5 riok-1 6698 1.94 - 0.970 - 0.970 - - - - Serine/threonine-protein kinase RIO1 [Source:UniProtKB/Swiss-Prot;Acc:O44959]
40. ZK742.1 xpo-1 20741 1.94 - 0.970 - 0.970 - - - - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
41. D2096.2 praf-3 18471 1.94 - 0.970 - 0.970 - - - - Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
42. F26H11.2 nurf-1 13015 1.94 - 0.970 - 0.970 - - - - Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
43. Y41C4A.9 Y41C4A.9 3730 1.94 - 0.970 - 0.970 - - - -
44. C47B2.2 C47B2.2 5565 1.938 - 0.969 - 0.969 - - - -
45. F09G2.9 attf-2 14771 1.938 - 0.969 - 0.969 - - - - AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
46. F53F4.3 tbcb-1 6442 1.938 - 0.969 - 0.969 - - - - Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
47. ZK1251.9 dcaf-1 10926 1.938 - 0.969 - 0.969 - - - - DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
48. Y37D8A.11 cec-7 8801 1.938 - 0.969 - 0.969 - - - - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
49. C44B7.2 C44B7.2 3742 1.938 - 0.969 - 0.969 - - - -
50. ZK1236.6 pqn-96 3989 1.938 - 0.969 - 0.969 - - - - Prion-like-(Q/N-rich) domain-bearing protein 96 [Source:UniProtKB/Swiss-Prot;Acc:P34622]
51. M28.5 M28.5 27326 1.938 - 0.969 - 0.969 - - - - NHP2-like protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21568]
52. Y37D8A.10 hpo-21 14222 1.936 - 0.968 - 0.968 - - - - Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWW1]
53. Y54E10A.9 vbh-1 28746 1.936 - 0.968 - 0.968 - - - - Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
54. T10B11.3 ztf-4 5161 1.936 - 0.968 - 0.968 - - - - Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
55. T05E8.3 let-355 8169 1.936 - 0.968 - 0.968 - - - -
56. C47B2.3 tba-2 31086 1.936 - 0.968 - 0.968 - - - - Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P34690]
57. R151.6 R151.6 6350 1.936 - 0.968 - 0.968 - - - - Derlin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q21997]
58. Y37E11AL.3 Y37E11AL.3 5448 1.936 - 0.968 - 0.968 - - - -
59. Y51A2D.7 Y51A2D.7 1840 1.936 - 0.968 - 0.968 - - - -
60. D2089.1 rsp-7 11057 1.936 - 0.968 - 0.968 - - - - Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
61. F36A4.7 ama-1 13620 1.934 - 0.967 - 0.967 - - - - DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
62. C02F5.3 C02F5.3 8669 1.934 - 0.967 - 0.967 - - - - Uncharacterized GTP-binding protein C02F5.3 [Source:UniProtKB/Swiss-Prot;Acc:P34280]
63. C34E10.2 gop-2 5684 1.934 - 0.967 - 0.967 - - - - GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
64. ZK546.14 ZK546.14 9848 1.934 - 0.967 - 0.967 - - - -
65. C06A8.2 snpc-1.1 1378 1.934 - 0.967 - 0.967 - - - - SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_495636]
66. Y48G8AL.6 smg-2 12561 1.934 - 0.967 - 0.967 - - - - Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
67. T20F5.2 pbs-4 8985 1.934 - 0.967 - 0.967 - - - - Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
68. E02H1.3 tag-124 2189 1.934 - 0.967 - 0.967 - - - - Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
69. F58G1.2 F58G1.2 3570 1.934 - 0.967 - 0.967 - - - -
70. M03F8.3 M03F8.3 3766 1.934 - 0.967 - 0.967 - - - -
71. Y48B6A.14 hmg-1.1 88723 1.934 - 0.967 - 0.967 - - - - HMG [Source:RefSeq peptide;Acc:NP_496970]
72. ZK1127.6 ZK1127.6 8118 1.934 - 0.967 - 0.967 - - - -
73. C33A12.3 C33A12.3 8034 1.932 - 0.966 - 0.966 - - - -
74. R11A8.7 R11A8.7 15531 1.932 - 0.966 - 0.966 - - - - Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
75. DY3.2 lmn-1 22449 1.932 - 0.966 - 0.966 - - - - Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
76. ZK616.5 ZK616.5 10527 1.932 - 0.966 - 0.966 - - - -
77. K01D12.6 K01D12.6 3014 1.932 - 0.966 - 0.966 - - - -
78. C17H12.13 anat-1 12995 1.932 - 0.966 - 0.966 - - - - AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
79. Y73B6BL.32 lsm-8 11002 1.932 - 0.966 - 0.966 - - - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
80. M03C11.3 M03C11.3 9388 1.932 - 0.966 - 0.966 - - - -
81. EEED8.5 mog-5 4698 1.932 - 0.966 - 0.966 - - - - Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
82. T04A8.14 emb-5 11746 1.932 - 0.966 - 0.966 - - - - Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
83. W02B12.3 rsp-1 9235 1.932 - 0.966 - 0.966 - - - - Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
84. F48C1.6 F48C1.6 4064 1.932 - 0.966 - 0.966 - - - -
85. M01B12.4 M01B12.4 5369 1.932 - 0.966 - 0.966 - - - -
86. F25B5.6 F25B5.6 10665 1.932 - 0.966 - 0.966 - - - - Putative folylpolyglutamate synthase [Source:UniProtKB/Swiss-Prot;Acc:Q09509]
87. C09G9.2 npp-23 2886 1.932 - 0.966 - 0.966 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_501537]
88. F41H10.6 hda-6 3325 1.932 - 0.966 - 0.966 - - - - Histone deacetylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20296]
89. F42A9.6 F42A9.6 5573 1.932 - 0.966 - 0.966 - - - -
90. T01B7.5 T01B7.5 4540 1.932 - 0.966 - 0.966 - - - -
91. T10B5.3 T10B5.3 15788 1.93 - 0.965 - 0.965 - - - -
92. K12D12.1 top-2 18694 1.93 - 0.965 - 0.965 - - - - Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
93. Y43H11AL.1 Y43H11AL.1 10665 1.93 - 0.965 - 0.965 - - - -
94. T20H4.4 adr-2 5495 1.93 - 0.965 - 0.965 - - - - Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
95. C17G10.1 C17G10.1 2637 1.93 - 0.965 - 0.965 - - - -
96. F54D5.14 smc-6 10569 1.93 - 0.965 - 0.965 - - - - SMC (structural maintenance of chromosomes) family [Source:RefSeq peptide;Acc:NP_496476]
97. T05B9.1 T05B9.1 23308 1.93 - 0.965 - 0.965 - - - -
98. C27H6.8 C27H6.8 7318 1.93 - 0.965 - 0.965 - - - - UPF0160 protein C27H6.8 [Source:UniProtKB/Swiss-Prot;Acc:O17606]
99. Y113G7B.23 swsn-1 13766 1.93 - 0.965 - 0.965 - - - - SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
100. R07G3.3 npp-21 3792 1.93 - 0.965 - 0.965 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]

There are 585 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA