C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F53H1.1

Gene ID Gene Name Reads Transcripts Annotation
F53H1.1 F53H1.1 3974 F53H1.1a, F53H1.1b, F53H1.1c, F53H1.1d, F53H1.1e

Genes with expression patterns similar to F53H1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F53H1.1 F53H1.1 3974 2 - 1.000 - 1.000 - - - -
2. Y62E10A.11 mdt-9 5971 1.96 - 0.980 - 0.980 - - - - MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
3. ZK1236.7 ufbp-1 6217 1.96 - 0.980 - 0.980 - - - - DDRGK domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34623]
4. K08E3.8 mdt-29 4678 1.952 - 0.976 - 0.976 - - - - Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
5. Y17G7A.1 hmg-12 29989 1.95 - 0.975 - 0.975 - - - - HMG [Source:RefSeq peptide;Acc:NP_496544]
6. T08B2.5 T08B2.5 4823 1.95 - 0.975 - 0.975 - - - -
7. C43E11.1 acin-1 7781 1.95 - 0.975 - 0.975 - - - - ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
8. F26F4.11 rpb-8 7601 1.95 - 0.975 - 0.975 - - - - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
9. Y53C12B.3 nos-3 20231 1.95 - 0.975 - 0.975 - - - - NanOS related [Source:RefSeq peptide;Acc:NP_496101]
10. C17E4.5 pabp-2 12843 1.948 - 0.974 - 0.974 - - - - PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
11. H21P03.1 mbf-1 25586 1.948 - 0.974 - 0.974 - - - - MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
12. T23H2.1 npp-12 12425 1.948 - 0.974 - 0.974 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
13. C53D5.6 imb-3 28921 1.948 - 0.974 - 0.974 - - - - IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
14. B0041.7 xnp-1 9187 1.948 - 0.974 - 0.974 - - - - Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
15. C08B11.2 hda-2 2313 1.948 - 0.974 - 0.974 - - - - Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
16. C17G10.2 C17G10.2 2288 1.946 - 0.973 - 0.973 - - - -
17. T10F2.4 prp-19 11298 1.946 - 0.973 - 0.973 - - - - Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
18. T22D1.3 T22D1.3 15552 1.946 - 0.973 - 0.973 - - - - Inosine-5'-monophosphate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH3]
19. Y71G12B.13 Y71G12B.13 6205 1.946 - 0.973 - 0.973 - - - -
20. T05H10.1 T05H10.1 13896 1.946 - 0.973 - 0.973 - - - - Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_495686]
21. R144.6 R144.6 4213 1.944 - 0.972 - 0.972 - - - - Transmembrane protein 144 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q10000]
22. W06E11.4 sbds-1 6701 1.944 - 0.972 - 0.972 - - - - Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
23. T09E8.2 him-17 4153 1.944 - 0.972 - 0.972 - - - - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
24. C06E7.1 sams-3 26921 1.944 - 0.972 - 0.972 - - - - Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
25. R05D11.4 R05D11.4 2590 1.944 - 0.972 - 0.972 - - - -
26. E01A2.4 let-504 9788 1.944 - 0.972 - 0.972 - - - -
27. H35B03.2 H35B03.2 3335 1.942 - 0.971 - 0.971 - - - -
28. B0464.5 spk-1 35112 1.942 - 0.971 - 0.971 - - - - Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
29. D1081.8 cdc-5L 8553 1.942 - 0.971 - 0.971 - - - - Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
30. C26E6.4 rpb-2 7053 1.942 - 0.971 - 0.971 - - - - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
31. Y37E3.15 npp-13 7250 1.942 - 0.971 - 0.971 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
32. F55A3.3 F55A3.3 15671 1.942 - 0.971 - 0.971 - - - - FACT complex subunit spt-16 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5R9]
33. ZK381.4 pgl-1 20651 1.942 - 0.971 - 0.971 - - - - P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
34. K08D12.1 pbs-1 21677 1.94 - 0.970 - 0.970 - - - - Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
35. D2096.2 praf-3 18471 1.94 - 0.970 - 0.970 - - - - Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
36. ZK742.1 xpo-1 20741 1.94 - 0.970 - 0.970 - - - - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
37. C35B1.2 C35B1.2 3412 1.94 - 0.970 - 0.970 - - - -
38. F18E2.3 scc-3 13464 1.94 - 0.970 - 0.970 - - - - Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
39. Y41C4A.9 Y41C4A.9 3730 1.94 - 0.970 - 0.970 - - - -
40. F26H11.2 nurf-1 13015 1.94 - 0.970 - 0.970 - - - - Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
41. M01B12.5 riok-1 6698 1.94 - 0.970 - 0.970 - - - - Serine/threonine-protein kinase RIO1 [Source:UniProtKB/Swiss-Prot;Acc:O44959]
42. K01G5.4 ran-1 32379 1.94 - 0.970 - 0.970 - - - - GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
43. T16G1.11 eif-3.K 14014 1.94 - 0.970 - 0.970 - - - - Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
44. F09G2.9 attf-2 14771 1.938 - 0.969 - 0.969 - - - - AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
45. Y37D8A.11 cec-7 8801 1.938 - 0.969 - 0.969 - - - - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
46. C44B7.2 C44B7.2 3742 1.938 - 0.969 - 0.969 - - - -
47. F53F4.3 tbcb-1 6442 1.938 - 0.969 - 0.969 - - - - Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
48. C47B2.2 C47B2.2 5565 1.938 - 0.969 - 0.969 - - - -
49. ZK1251.9 dcaf-1 10926 1.938 - 0.969 - 0.969 - - - - DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
50. M28.5 M28.5 27326 1.938 - 0.969 - 0.969 - - - - NHP2-like protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21568]
51. ZK1236.6 pqn-96 3989 1.938 - 0.969 - 0.969 - - - - Prion-like-(Q/N-rich) domain-bearing protein 96 [Source:UniProtKB/Swiss-Prot;Acc:P34622]
52. R151.6 R151.6 6350 1.936 - 0.968 - 0.968 - - - - Derlin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q21997]
53. T05E8.3 let-355 8169 1.936 - 0.968 - 0.968 - - - -
54. D2089.1 rsp-7 11057 1.936 - 0.968 - 0.968 - - - - Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
55. Y51A2D.7 Y51A2D.7 1840 1.936 - 0.968 - 0.968 - - - -
56. Y37E11AL.3 Y37E11AL.3 5448 1.936 - 0.968 - 0.968 - - - -
57. Y54E10A.9 vbh-1 28746 1.936 - 0.968 - 0.968 - - - - Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
58. C47B2.3 tba-2 31086 1.936 - 0.968 - 0.968 - - - - Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P34690]
59. Y37D8A.10 hpo-21 14222 1.936 - 0.968 - 0.968 - - - - Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWW1]
60. T10B11.3 ztf-4 5161 1.936 - 0.968 - 0.968 - - - - Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
61. Y48G8AL.6 smg-2 12561 1.934 - 0.967 - 0.967 - - - - Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
62. E02H1.3 tag-124 2189 1.934 - 0.967 - 0.967 - - - - Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
63. ZK1127.6 ZK1127.6 8118 1.934 - 0.967 - 0.967 - - - -
64. T20F5.2 pbs-4 8985 1.934 - 0.967 - 0.967 - - - - Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
65. C06A8.2 snpc-1.1 1378 1.934 - 0.967 - 0.967 - - - - SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_495636]
66. C34E10.2 gop-2 5684 1.934 - 0.967 - 0.967 - - - - GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
67. M03F8.3 M03F8.3 3766 1.934 - 0.967 - 0.967 - - - -
68. C02F5.3 C02F5.3 8669 1.934 - 0.967 - 0.967 - - - - Uncharacterized GTP-binding protein C02F5.3 [Source:UniProtKB/Swiss-Prot;Acc:P34280]
69. Y48B6A.14 hmg-1.1 88723 1.934 - 0.967 - 0.967 - - - - HMG [Source:RefSeq peptide;Acc:NP_496970]
70. F58G1.2 F58G1.2 3570 1.934 - 0.967 - 0.967 - - - -
71. F36A4.7 ama-1 13620 1.934 - 0.967 - 0.967 - - - - DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
72. ZK546.14 ZK546.14 9848 1.934 - 0.967 - 0.967 - - - -
73. F48C1.6 F48C1.6 4064 1.932 - 0.966 - 0.966 - - - -
74. C09G9.2 npp-23 2886 1.932 - 0.966 - 0.966 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_501537]
75. K01D12.6 K01D12.6 3014 1.932 - 0.966 - 0.966 - - - -
76. F25B5.6 F25B5.6 10665 1.932 - 0.966 - 0.966 - - - - Putative folylpolyglutamate synthase [Source:UniProtKB/Swiss-Prot;Acc:Q09509]
77. C33A12.3 C33A12.3 8034 1.932 - 0.966 - 0.966 - - - -
78. Y73B6BL.32 lsm-8 11002 1.932 - 0.966 - 0.966 - - - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
79. ZK616.5 ZK616.5 10527 1.932 - 0.966 - 0.966 - - - -
80. R11A8.7 R11A8.7 15531 1.932 - 0.966 - 0.966 - - - - Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
81. F41H10.6 hda-6 3325 1.932 - 0.966 - 0.966 - - - - Histone deacetylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20296]
82. T01B7.5 T01B7.5 4540 1.932 - 0.966 - 0.966 - - - -
83. M03C11.3 M03C11.3 9388 1.932 - 0.966 - 0.966 - - - -
84. W02B12.3 rsp-1 9235 1.932 - 0.966 - 0.966 - - - - Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
85. T04A8.14 emb-5 11746 1.932 - 0.966 - 0.966 - - - - Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
86. DY3.2 lmn-1 22449 1.932 - 0.966 - 0.966 - - - - Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
87. F42A9.6 F42A9.6 5573 1.932 - 0.966 - 0.966 - - - -
88. C17H12.13 anat-1 12995 1.932 - 0.966 - 0.966 - - - - AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
89. M01B12.4 M01B12.4 5369 1.932 - 0.966 - 0.966 - - - -
90. EEED8.5 mog-5 4698 1.932 - 0.966 - 0.966 - - - - Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
91. C26D10.2 hel-1 28697 1.93 - 0.965 - 0.965 - - - - Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
92. R08D7.1 R08D7.1 3201 1.93 - 0.965 - 0.965 - - - - BUD13 homolog [Source:UniProtKB/Swiss-Prot;Acc:P30640]
93. Y113G7B.23 swsn-1 13766 1.93 - 0.965 - 0.965 - - - - SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
94. T21E12.4 dhc-1 20370 1.93 - 0.965 - 0.965 - - - - Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
95. F44G4.1 F44G4.1 4086 1.93 - 0.965 - 0.965 - - - - Brix domain-containing protein F44G4.1 [Source:UniProtKB/Swiss-Prot;Acc:P54073]
96. Y43H11AL.1 Y43H11AL.1 10665 1.93 - 0.965 - 0.965 - - - -
97. K12D12.1 top-2 18694 1.93 - 0.965 - 0.965 - - - - Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
98. F36F2.3 rbpl-1 15376 1.93 - 0.965 - 0.965 - - - - Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
99. T05B9.1 T05B9.1 23308 1.93 - 0.965 - 0.965 - - - -
100. C27H6.8 C27H6.8 7318 1.93 - 0.965 - 0.965 - - - - UPF0160 protein C27H6.8 [Source:UniProtKB/Swiss-Prot;Acc:O17606]

There are 585 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA