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Results for F02E9.4

Gene ID Gene Name Reads Transcripts Annotation
F02E9.4 sin-3 4655 F02E9.4a, F02E9.4b SIN3 (yeast Switch INdependent) histone deacetylase component homolog [Source:RefSeq peptide;Acc:NP_492284]

Genes with expression patterns similar to F02E9.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F02E9.4 sin-3 4655 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIN3 (yeast Switch INdependent) histone deacetylase component homolog [Source:RefSeq peptide;Acc:NP_492284]
2. W08D2.5 catp-6 7281 7.548 0.943 0.960 0.949 0.960 0.941 0.933 0.944 0.918 Probable cation-transporting ATPase W08D2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q27533]
3. C08B11.3 swsn-7 11608 7.522 0.940 0.967 0.970 0.967 0.959 0.921 0.891 0.907 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
4. ZK973.2 cec-10 7108 7.522 0.963 0.967 0.943 0.967 0.953 0.890 0.913 0.926 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
5. M03C11.4 hat-1 3839 7.51 0.926 0.933 0.971 0.933 0.940 0.932 0.931 0.944 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
6. Y41D4B.19 npp-8 12992 7.509 0.924 0.967 0.938 0.967 0.951 0.923 0.885 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
7. F18C5.2 wrn-1 3792 7.492 0.936 0.950 0.962 0.950 0.924 0.927 0.929 0.914 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
8. Y40B1B.6 spr-5 6252 7.491 0.887 0.983 0.953 0.983 0.935 0.912 0.885 0.953 Probable lysine-specific histone demethylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWP6]
9. Y38E10A.6 ceh-100 5505 7.491 0.930 0.924 0.960 0.924 0.939 0.918 0.958 0.938 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
10. C10C5.6 daf-15 8724 7.487 0.931 0.961 0.960 0.961 0.943 0.928 0.880 0.923 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
11. F10E9.8 sas-4 3703 7.481 0.925 0.973 0.946 0.973 0.962 0.889 0.911 0.902 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
12. K07A12.2 egg-6 18331 7.477 0.927 0.963 0.961 0.963 0.931 0.894 0.893 0.945 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
13. B0035.3 B0035.3 4118 7.473 0.925 0.969 0.936 0.969 0.931 0.922 0.937 0.884
14. R119.4 pqn-59 16065 7.471 0.928 0.949 0.945 0.949 0.920 0.972 0.924 0.884 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
15. F55G1.8 plk-3 12036 7.468 0.929 0.962 0.930 0.962 0.954 0.915 0.886 0.930 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
16. F48E8.3 F48E8.3 4186 7.467 0.907 0.955 0.928 0.955 0.946 0.900 0.931 0.945
17. Y48G1A.5 xpo-2 11748 7.463 0.923 0.962 0.963 0.962 0.948 0.921 0.860 0.924 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
18. C01H6.7 swsn-9 3963 7.462 0.958 0.955 0.967 0.955 0.926 0.922 0.822 0.957 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001122414]
19. K06H7.4 grp-1 4601 7.458 0.941 0.954 0.938 0.954 0.919 0.920 0.914 0.918 GTP exchange factor for ARFs 1 [Source:UniProtKB/Swiss-Prot;Acc:P34512]
20. B0464.2 ctr-9 7610 7.45 0.910 0.957 0.948 0.957 0.955 0.917 0.936 0.870 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
21. T09A5.8 cec-3 5813 7.449 0.919 0.960 0.979 0.960 0.937 0.923 0.886 0.885 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
22. ZK1320.12 taf-8 3558 7.446 0.914 0.914 0.955 0.914 0.968 0.913 0.907 0.961 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
23. T08G5.5 vps-39 4669 7.443 0.956 0.946 0.979 0.946 0.895 0.897 0.914 0.910 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_001041163]
24. T10G3.5 eea-1 7675 7.442 0.947 0.966 0.951 0.966 0.923 0.947 0.888 0.854 EEA1 (Early Endosome Antigen, Rab effector) homolog [Source:RefSeq peptide;Acc:NP_001024127]
25. T23H2.1 npp-12 12425 7.442 0.916 0.971 0.947 0.971 0.932 0.921 0.901 0.883 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
26. Y51H1A.4 ing-3 8617 7.44 0.938 0.934 0.952 0.934 0.954 0.921 0.891 0.916 Inhibitor of growth protein [Source:RefSeq peptide;Acc:NP_496909]
27. T05H10.2 apn-1 5628 7.438 0.888 0.964 0.962 0.964 0.888 0.953 0.861 0.958 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
28. F33H2.1 dog-1 2417 7.437 0.937 0.938 0.953 0.938 0.930 0.915 0.917 0.909 Deletions Of G-rich DNA [Source:RefSeq peptide;Acc:NP_493618]
29. F45E12.2 brf-1 4667 7.434 0.934 0.977 0.973 0.977 0.910 0.933 0.864 0.866 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
30. ZK328.2 eftu-2 7040 7.433 0.903 0.968 0.946 0.968 0.897 0.905 0.944 0.902 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
31. ZK1251.9 dcaf-1 10926 7.433 0.908 0.960 0.922 0.960 0.941 0.920 0.918 0.904 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
32. F53F4.3 tbcb-1 6442 7.432 0.858 0.969 0.924 0.969 0.945 0.872 0.951 0.944 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
33. F32A5.1 ada-2 8343 7.432 0.950 0.969 0.976 0.969 0.920 0.910 0.870 0.868 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
34. F59E10.1 orc-2 4698 7.431 0.862 0.964 0.944 0.964 0.951 0.896 0.919 0.931 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
35. F52C9.7 mog-3 9880 7.43 0.903 0.949 0.954 0.949 0.943 0.917 0.896 0.919 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
36. C37A2.2 pqn-20 10913 7.425 0.892 0.964 0.921 0.964 0.947 0.942 0.863 0.932 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
37. F32H2.1 snpc-4 7581 7.423 0.886 0.955 0.951 0.955 0.932 0.920 0.902 0.922 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
38. T01C3.1 cdt-2 5193 7.421 0.943 0.958 0.978 0.958 0.916 0.921 0.888 0.859 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
39. T23B5.1 prmt-3 10677 7.42 0.929 0.974 0.959 0.974 0.898 0.886 0.942 0.858 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
40. JC8.6 lin-54 5789 7.42 0.925 0.970 0.974 0.970 0.925 0.889 0.858 0.909
41. R06F6.1 cdl-1 14167 7.419 0.932 0.969 0.963 0.969 0.922 0.887 0.848 0.929 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
42. K03H1.2 mog-1 4057 7.418 0.967 0.941 0.960 0.941 0.914 0.931 0.861 0.903 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
43. F57B9.7 flap-1 5377 7.416 0.902 0.966 0.945 0.966 0.931 0.916 0.872 0.918 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
44. E01A2.4 let-504 9788 7.416 0.896 0.962 0.944 0.962 0.948 0.923 0.925 0.856
45. Y37A1B.1 lst-3 10739 7.414 0.915 0.958 0.918 0.958 0.934 0.908 0.937 0.886 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
46. Y41D4B.13 ced-2 10100 7.412 0.908 0.941 0.962 0.941 0.941 0.907 0.862 0.950 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
47. K06A5.7 cdc-25.1 14961 7.408 0.936 0.972 0.979 0.972 0.938 0.852 0.911 0.848 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
48. F22D6.5 prpf-4 9522 7.407 0.922 0.960 0.952 0.960 0.945 0.929 0.901 0.838 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
49. F25B3.6 rtfo-1 11965 7.405 0.926 0.953 0.974 0.953 0.939 0.906 0.894 0.860 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
50. C01G8.3 dhs-1 5394 7.404 0.897 0.961 0.954 0.961 0.948 0.912 0.867 0.904 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491557]
51. T26A8.1 T26A8.1 4387 7.401 0.923 0.970 0.936 0.970 0.918 0.885 0.923 0.876
52. K08E7.3 let-99 6791 7.401 0.934 0.959 0.953 0.959 0.936 0.831 0.952 0.877
53. F28C6.6 suf-1 3642 7.399 0.926 0.955 0.907 0.955 0.953 0.913 0.887 0.903 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
54. F21D5.2 otub-3 8469 7.399 0.941 0.955 0.978 0.955 0.911 0.863 0.905 0.891 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_001255319]
55. B0336.1 wrm-1 8284 7.399 0.928 0.965 0.955 0.965 0.951 0.866 0.918 0.851 Armadillo repeat-containing protein wrm-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10953]
56. Y71G12B.9 lin-65 7476 7.394 0.926 0.951 0.942 0.951 0.942 0.912 0.885 0.885 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
57. C04H5.6 mog-4 4517 7.393 0.922 0.956 0.933 0.956 0.925 0.896 0.932 0.873 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
58. R08C7.10 wapl-1 4967 7.391 0.909 0.959 0.974 0.959 0.903 0.904 0.892 0.891 WAPL (Drosophila Wings APart-Like cohesin interactor) [Source:RefSeq peptide;Acc:NP_500567]
59. F08B4.5 pole-2 8234 7.388 0.894 0.962 0.942 0.962 0.952 0.851 0.933 0.892 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
60. F59G1.5 ptp-2 7879 7.388 0.928 0.962 0.932 0.962 0.905 0.888 0.900 0.911 Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
61. F36D4.3 hum-2 16493 7.388 0.923 0.965 0.949 0.965 0.940 0.890 0.872 0.884 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
62. B0361.3 B0361.3 3507 7.385 0.918 0.945 0.958 0.945 0.911 0.897 0.897 0.914
63. B0336.6 abi-1 3184 7.384 0.888 0.968 0.966 0.968 0.936 0.899 0.806 0.953 ABl Interactor homolog [Source:RefSeq peptide;Acc:NP_498224]
64. F56D2.6 ddx-15 12282 7.384 0.889 0.955 0.928 0.955 0.934 0.923 0.913 0.887 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
65. C41C4.6 ulp-4 13338 7.383 0.924 0.935 0.955 0.935 0.926 0.919 0.846 0.943 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
66. C25D7.8 otub-1 7941 7.381 0.847 0.964 0.934 0.964 0.933 0.957 0.904 0.878 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
67. ZK686.4 snu-23 9040 7.381 0.897 0.949 0.960 0.949 0.941 0.914 0.951 0.820 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
68. C09H10.6 nasp-1 6094 7.38 0.927 0.966 0.982 0.966 0.896 0.896 0.877 0.870 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
69. C53A5.3 hda-1 18413 7.379 0.896 0.959 0.950 0.959 0.941 0.956 0.833 0.885 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
70. T06E4.3 atl-1 1545 7.378 0.921 0.929 0.942 0.929 0.934 0.958 0.921 0.844 Serine/threonine-protein kinase ATR [Source:UniProtKB/Swiss-Prot;Acc:Q22258]
71. F55F8.4 cir-1 9437 7.378 0.925 0.943 0.940 0.943 0.953 0.926 0.928 0.820 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
72. F28B12.3 vrk-1 7133 7.378 0.926 0.945 0.961 0.945 0.935 0.947 0.854 0.865 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]
73. R13H4.4 hmp-1 7668 7.378 0.922 0.951 0.952 0.951 0.935 0.893 0.857 0.917 Alpha-catenin-like protein hmp-1 [Source:UniProtKB/Swiss-Prot;Acc:P90947]
74. C10C6.1 kin-4 13566 7.377 0.927 0.969 0.967 0.969 0.931 0.881 0.891 0.842 KIN-4 protein; Protein KINase [Source:UniProtKB/TrEMBL;Acc:G5EFA4]
75. T04A8.14 emb-5 11746 7.376 0.931 0.969 0.965 0.969 0.910 0.947 0.857 0.828 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
76. M106.1 mix-1 7950 7.376 0.945 0.966 0.958 0.966 0.905 0.923 0.837 0.876 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
77. F53G12.5 mex-3 29076 7.375 0.888 0.938 0.958 0.938 0.929 0.896 0.904 0.924 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
78. T22C1.3 T22C1.3 2305 7.372 0.855 0.933 0.952 0.933 0.952 0.931 0.910 0.906
79. F26F4.7 nhl-2 13541 7.372 0.922 0.970 0.954 0.970 0.933 0.848 0.890 0.885 NHL (ring finger b-box coiled coil) domain containing [Source:RefSeq peptide;Acc:NP_498026]
80. Y105E8A.17 ekl-4 4732 7.371 0.909 0.956 0.960 0.956 0.912 0.962 0.933 0.783
81. C36A4.8 brc-1 1664 7.371 0.854 0.959 0.979 0.959 0.940 0.943 0.826 0.911 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
82. ZC395.8 ztf-8 5521 7.37 0.948 0.959 0.944 0.959 0.905 0.920 0.886 0.849 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
83. F43G6.9 patr-1 23000 7.369 0.933 0.951 0.961 0.951 0.918 0.891 0.860 0.904 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
84. F18E2.3 scc-3 13464 7.369 0.931 0.974 0.961 0.974 0.883 0.920 0.842 0.884 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
85. F30F8.3 gras-1 5902 7.369 0.904 0.949 0.951 0.949 0.917 0.878 0.925 0.896 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
86. C17E4.10 C17E4.10 7034 7.369 0.929 0.930 0.964 0.930 0.906 0.907 0.898 0.905
87. H38K22.1 evl-14 3704 7.368 0.929 0.959 0.927 0.959 0.953 0.901 0.952 0.788
88. R12C12.2 ran-5 14517 7.367 0.872 0.976 0.960 0.976 0.927 0.905 0.925 0.826 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
89. B0240.4 npp-22 5510 7.365 0.921 0.962 0.982 0.962 0.920 0.908 0.786 0.924 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
90. F32E10.6 cec-5 10643 7.365 0.924 0.948 0.935 0.948 0.932 0.951 0.933 0.794 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
91. C26E6.7 eri-9 8069 7.365 0.893 0.969 0.966 0.969 0.931 0.889 0.833 0.915 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
92. T09E8.2 him-17 4153 7.365 0.926 0.946 0.969 0.946 0.904 0.907 0.842 0.925 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
93. Y53C12B.3 nos-3 20231 7.362 0.854 0.962 0.911 0.962 0.947 0.934 0.900 0.892 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
94. F44C4.4 gon-14 3947 7.362 0.941 0.946 0.957 0.946 0.898 0.892 0.928 0.854
95. Y39G10AR.13 icp-1 3445 7.361 0.869 0.971 0.940 0.971 0.932 0.881 0.900 0.897 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
96. C07G1.3 pct-1 10635 7.358 0.941 0.958 0.952 0.958 0.936 0.885 0.854 0.874 Cyclin-dependent kinase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8I7M8]
97. C18G1.5 hil-4 21692 7.358 0.919 0.973 0.976 0.973 0.904 0.906 0.904 0.803 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
98. F58D5.4 ksr-2 5973 7.357 0.932 0.954 0.956 0.954 0.933 0.862 0.922 0.844 Kinase suppressor of Ras B [Source:UniProtKB/Swiss-Prot;Acc:G5EDA5]
99. B0041.7 xnp-1 9187 7.357 0.937 0.964 0.924 0.964 0.874 0.883 0.926 0.885 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
100. C48E7.3 lpd-2 10330 7.357 0.862 0.964 0.951 0.964 0.927 0.955 0.845 0.889 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA