C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for B0280.11

Gene ID Gene Name Reads Transcripts Annotation
B0280.11 B0280.11 793 B0280.11 Putative tyrosine-protein phosphatase B0280.11 [Source:UniProtKB/Swiss-Prot;Acc:P42083]

Genes with expression patterns similar to B0280.11

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0280.11 B0280.11 793 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000 Putative tyrosine-protein phosphatase B0280.11 [Source:UniProtKB/Swiss-Prot;Acc:P42083]
2. C30G12.7 puf-8 5785 5.731 0.936 - 0.960 - 0.969 0.976 0.930 0.960 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
3. B0414.3 hil-5 10816 5.713 0.935 - 0.947 - 0.965 0.974 0.920 0.972 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
4. Y14H12B.2 Y14H12B.2 6496 5.709 0.938 - 0.969 - 0.964 0.972 0.910 0.956
5. F53F4.12 F53F4.12 2683 5.709 0.905 - 0.928 - 0.984 0.988 0.933 0.971
6. F10E7.6 F10E7.6 2788 5.709 0.906 - 0.961 - 0.979 0.987 0.951 0.925
7. F53F10.1 F53F10.1 0 5.706 0.932 - 0.974 - 0.965 0.984 0.929 0.922
8. E02H9.1 E02H9.1 3662 5.697 0.936 - 0.948 - 0.975 0.980 0.945 0.913
9. F14B4.3 rpoa-2 7549 5.683 0.928 - 0.941 - 0.964 0.980 0.935 0.935 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
10. Y37D8A.9 mrg-1 14369 5.676 0.950 - 0.977 - 0.936 0.975 0.905 0.933 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
11. B0261.8 B0261.8 304 5.673 0.900 - 0.954 - 0.953 0.979 0.933 0.954
12. Y54E10A.11 Y54E10A.11 2415 5.672 0.867 - 0.939 - 0.964 0.987 0.952 0.963 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
13. F25H9.2 F25H9.2 68 5.67 0.935 - 0.957 - 0.971 0.966 0.891 0.950
14. W06H3.2 pus-1 1382 5.669 0.918 - 0.943 - 0.946 0.983 0.935 0.944 tRNA pseudouridine synthase [Source:RefSeq peptide;Acc:NP_507242]
15. Y48A6B.7 Y48A6B.7 2873 5.668 0.870 - 0.928 - 0.971 0.989 0.939 0.971
16. R06F6.1 cdl-1 14167 5.665 0.914 - 0.973 - 0.929 0.974 0.921 0.954 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
17. Y54G11A.14 Y54G11A.14 87 5.66 0.931 - 0.964 - 0.957 0.962 0.919 0.927
18. F26B1.3 ima-2 18826 5.66 0.913 - 0.957 - 0.965 0.968 0.935 0.922 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
19. K07A1.12 lin-53 15817 5.658 0.915 - 0.969 - 0.975 0.957 0.950 0.892 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
20. Y39E4B.2 snpc-1.2 5800 5.647 0.884 - 0.974 - 0.960 0.966 0.958 0.905 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
21. K08F4.2 gtbp-1 25222 5.646 0.883 - 0.954 - 0.960 0.977 0.939 0.933 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
22. H04D03.3 H04D03.3 0 5.643 0.930 - 0.966 - 0.932 0.945 0.896 0.974
23. T28D9.2 rsp-5 6460 5.641 0.931 - 0.969 - 0.952 0.974 0.892 0.923 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
24. F59A2.1 npp-9 34375 5.639 0.947 - 0.941 - 0.961 0.973 0.904 0.913 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
25. C18A3.7 C18A3.7 1986 5.638 0.883 - 0.902 - 0.976 0.982 0.929 0.966
26. F21C3.4 rde-2 6286 5.634 0.909 - 0.941 - 0.947 0.984 0.928 0.925
27. Y23H5B.7 Y23H5B.7 0 5.633 0.906 - 0.945 - 0.942 0.975 0.913 0.952
28. K01G5.8 K01G5.8 4694 5.63 0.863 - 0.910 - 0.973 0.990 0.925 0.969
29. F09G2.9 attf-2 14771 5.63 0.912 - 0.969 - 0.950 0.949 0.944 0.906 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
30. T13F2.4 T13F2.4 0 5.626 0.947 - 0.910 - 0.977 0.967 0.921 0.904
31. K07A1.3 K07A1.3 0 5.626 0.926 - 0.969 - 0.944 0.985 0.926 0.876
32. T10B5.4 T10B5.4 0 5.626 0.889 - 0.907 - 0.972 0.979 0.906 0.973
33. M28.8 M28.8 490 5.624 0.855 - 0.923 - 0.977 0.973 0.952 0.944
34. Y71G12B.9 lin-65 7476 5.623 0.943 - 0.950 - 0.949 0.963 0.910 0.908 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
35. Y17G7B.5 mcm-2 6246 5.623 0.936 - 0.981 - 0.960 0.942 0.922 0.882 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
36. T23G5.1 rnr-1 5022 5.622 0.908 - 0.937 - 0.966 0.964 0.929 0.918 Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q03604]
37. B0513.2 B0513.2 3641 5.621 0.837 - 0.893 - 0.977 0.981 0.955 0.978
38. Y62E10A.12 lsm-3 4322 5.621 0.883 - 0.925 - 0.967 0.978 0.922 0.946 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
39. Y37E3.3 rpb-10 4051 5.616 0.915 - 0.976 - 0.937 0.952 0.878 0.958 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
40. Y48G1A.5 xpo-2 11748 5.615 0.929 - 0.947 - 0.937 0.973 0.917 0.912 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
41. Y23H5B.6 Y23H5B.6 5886 5.614 0.923 - 0.943 - 0.953 0.973 0.864 0.958
42. T01B7.8 T01B7.8 0 5.613 0.925 - 0.942 - 0.941 0.950 0.906 0.949
43. F55A12.8 nath-10 4253 5.613 0.903 - 0.893 - 0.969 0.987 0.950 0.911 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
44. C45G9.4 C45G9.4 2483 5.609 0.947 - 0.954 - 0.918 0.946 0.883 0.961
45. K09H9.6 lpd-6 5459 5.609 0.904 - 0.968 - 0.953 0.972 0.919 0.893 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
46. F32D1.10 mcm-7 21233 5.608 0.903 - 0.969 - 0.946 0.973 0.900 0.917 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
47. K01G5.2 hpl-2 6781 5.608 0.921 - 0.941 - 0.936 0.957 0.922 0.931 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
48. ZK1128.6 ttll-4 6059 5.607 0.932 - 0.966 - 0.951 0.985 0.871 0.902 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
49. C06A1.5 rpb-6 7515 5.607 0.918 - 0.927 - 0.929 0.978 0.906 0.949 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
50. C27F2.6 C27F2.6 104 5.606 0.870 - 0.954 - 0.929 0.964 0.936 0.953
51. C48B4.8 C48B4.8 1721 5.605 0.898 - 0.967 - 0.958 0.981 0.927 0.874
52. M18.5 ddb-1 3823 5.604 0.941 - 0.925 - 0.950 0.953 0.912 0.923 DNA damage-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21554]
53. H27M09.2 rpb-5 4744 5.603 0.888 - 0.914 - 0.975 0.949 0.907 0.970 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
54. C27H6.2 ruvb-1 6291 5.601 0.877 - 0.937 - 0.953 0.975 0.943 0.916 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
55. T04A8.7 T04A8.7 0 5.6 0.886 - 0.900 - 0.982 0.989 0.901 0.942
56. Y54E5A.6 Y54E5A.6 770 5.6 0.884 - 0.945 - 0.953 0.968 0.908 0.942
57. T09E8.2 him-17 4153 5.599 0.913 - 0.959 - 0.930 0.952 0.950 0.895 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
58. Y39G10AR.14 mcm-4 4312 5.597 0.941 - 0.902 - 0.948 0.979 0.890 0.937 yeast MCM (licensing factor) related [Source:RefSeq peptide;Acc:NP_001293322]
59. Y48B6A.5 Y48B6A.5 3268 5.596 0.891 - 0.912 - 0.970 0.971 0.915 0.937 Major sperm protein [Source:RefSeq peptide;Acc:NP_496960]
60. F09F7.3 rpc-2 9751 5.596 0.904 - 0.937 - 0.974 0.989 0.923 0.869 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
61. C34E10.2 gop-2 5684 5.592 0.923 - 0.944 - 0.948 0.971 0.893 0.913 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
62. Y48G1C.9 Y48G1C.9 1381 5.59 0.926 - 0.894 - 0.947 0.973 0.902 0.948
63. C48B4.11 C48B4.11 4384 5.584 0.934 - 0.954 - 0.938 0.952 0.901 0.905
64. C16A3.5 C16A3.5 17736 5.583 0.882 - 0.947 - 0.967 0.941 0.932 0.914
65. F23F1.1 nfyc-1 9983 5.581 0.947 - 0.951 - 0.945 0.965 0.886 0.887 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
66. F23D12.1 F23D12.1 17095 5.579 0.875 - 0.925 - 0.960 0.982 0.941 0.896
67. T07A9.10 T07A9.10 2400 5.579 0.824 - 0.930 - 0.970 0.971 0.956 0.928
68. Y47D3A.26 smc-3 6256 5.574 0.934 - 0.955 - 0.931 0.959 0.891 0.904 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
69. T05B9.2 T05B9.2 0 5.574 0.908 - 0.936 - 0.956 0.958 0.868 0.948
70. C47E12.9 C47E12.9 0 5.574 0.836 - 0.883 - 0.979 0.963 0.948 0.965
71. Y43F8C.8 mrps-28 4036 5.573 0.924 - 0.886 - 0.958 0.958 0.907 0.940 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
72. W03D2.4 pcn-1 20288 5.572 0.900 - 0.939 - 0.963 0.955 0.929 0.886 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
73. EEED8.1 tofu-6 3962 5.57 0.937 - 0.930 - 0.935 0.966 0.873 0.929 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
74. F44G4.4 tdp-1 3335 5.57 0.898 - 0.964 - 0.959 0.977 0.926 0.846 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
75. F58E10.3 ddx-17 15107 5.57 0.939 - 0.961 - 0.945 0.966 0.859 0.900 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
76. Y69A2AR.30 mdf-2 6403 5.57 0.938 - 0.971 - 0.920 0.981 0.875 0.885 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
77. Y71G12B.8 ddx-27 3584 5.569 0.862 - 0.934 - 0.979 0.978 0.921 0.895 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
78. K04C2.3 K04C2.3 23540 5.568 0.877 - 0.914 - 0.965 0.980 0.895 0.937
79. W03F8.4 W03F8.4 20285 5.568 0.918 - 0.960 - 0.904 0.957 0.923 0.906
80. ZK563.2 ZK563.2 0 5.568 0.806 - 0.914 - 0.959 0.963 0.950 0.976
81. R07E5.14 rnp-4 11659 5.567 0.910 - 0.967 - 0.916 0.947 0.911 0.916 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
82. F32H2.1 snpc-4 7581 5.567 0.932 - 0.958 - 0.934 0.969 0.888 0.886 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
83. C34D4.12 cyn-12 7363 5.566 0.855 - 0.924 - 0.963 0.977 0.944 0.903 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
84. Y57A10A.28 Y57A10A.28 4310 5.566 0.874 - 0.914 - 0.981 0.964 0.868 0.965
85. F10E9.12 F10E9.12 907 5.566 0.945 - 0.948 - 0.898 0.984 0.910 0.881
86. Y53C12B.2 Y53C12B.2 6115 5.565 0.861 - 0.914 - 0.976 0.948 0.945 0.921 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
87. F10G7.1 tag-151 9031 5.563 0.846 - 0.911 - 0.963 0.979 0.935 0.929 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
88. W04C9.5 W04C9.5 0 5.563 0.815 - 0.915 - 0.977 0.995 0.946 0.915
89. Y53G8AR.7 Y53G8AR.7 606 5.562 0.942 - 0.977 - 0.927 0.942 0.878 0.896
90. Y40B1B.8 Y40B1B.8 4877 5.562 0.871 - 0.906 - 0.971 0.959 0.929 0.926
91. T02H6.3 T02H6.3 124 5.561 0.858 - 0.965 - 0.912 0.967 0.909 0.950
92. E02H1.3 tag-124 2189 5.561 0.889 - 0.943 - 0.909 0.977 0.939 0.904 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
93. Y37D8A.11 cec-7 8801 5.56 0.889 - 0.959 - 0.967 0.988 0.924 0.833 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
94. C25D7.6 mcm-3 15241 5.56 0.903 - 0.908 - 0.969 0.949 0.937 0.894 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
95. Y116A8C.42 snr-1 17062 5.559 0.897 - 0.948 - 0.934 0.968 0.907 0.905 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
96. Y71F9B.4 snr-7 13542 5.558 0.887 - 0.944 - 0.945 0.967 0.878 0.937 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
97. Y53C12B.3 nos-3 20231 5.558 0.902 - 0.941 - 0.922 0.950 0.904 0.939 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
98. Y102E9.3 Y102E9.3 0 5.556 0.964 - 0.968 - 0.911 0.950 0.907 0.856
99. Y48B6A.3 xrn-2 4881 5.556 0.857 - 0.845 - 0.973 0.987 0.943 0.951 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
100. C16A3.3 let-716 8448 5.554 0.772 - 0.902 - 0.984 0.987 0.929 0.980

There are 1498 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA