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Experiment herm3, section s22.

Sample reads: 144,343. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 725.00 5022.80 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. F54E7.2 rps-12 639.00 4426.99 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
3. F42C5.8 rps-8 575.00 3983.60 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
4. C04F12.4 rpl-14 556.00 3851.96 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
5. F25H2.5 ndk-1 487.00 3373.93 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
6. Y24D9A.4 rpl-7A 456.00 3159.17 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
7. C49H3.11 rps-2 444.00 3076.03 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
8. B0041.4 rpl-4 439.00 3041.39 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
9. C07H6.5 cgh-1 439.00 3041.39 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
10. Y18D10A.17 car-1 439.00 3041.39 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
11. F10B5.1 rpl-10 433.00 2999.82 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
12. RIT1P.688 417.00 2888.97
13. Y105E8A.16 rps-20 417.00 2888.97 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
14. E04A4.7 cyc-2.1 412.00 2854.33 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
15. F13B10.2 rpl-3 407.00 2819.69 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
16. T07A9.14 T07A9.14 393.00 2722.70
17. ZC434.2 rps-7 388.00 2688.06 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
18. F40F11.1 rps-11 384.00 2660.35 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
19. F52B5.6 rpl-25.2 384.00 2660.35 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
20. F36A2.6 rps-15 371.00 2570.29 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
21. C42C1.14 rpl-34 366.00 2535.65 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
22. F46F11.2 cey-2 362.00 2507.93 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
23. D1007.6 rps-10 358.00 2480.22 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
24. F43D9.4 sip-1 358.00 2480.22 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
25. T27E9.1 ant-1.1 354.00 2452.51 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
26. Y82E9BR.3 Y82E9BR.3 354.00 2452.51 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
27. F37C12.4 rpl-36 350.00 2424.80 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
28. F56E10.4 rps-27 350.00 2424.80 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
29. R05G6.7 vdac-1 346.00 2397.09 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
30. Y71F9AL.13 rpl-1 346.00 2397.09 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
31. C09H10.2 rpl-41 335.00 2320.88 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
32. R09B3.3 R09B3.3 335.00 2320.88
33. D2096.8 nap-1 321.00 2223.89 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
34. T22F3.4 rpl-11.1 310.00 2147.68 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
35. Y71A12B.1 rps-6 307.00 2126.89 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
36. W09C5.6 rpl-31 304.00 2106.11 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
37. Y48B6A.14 hmg-1.1 300.00 2078.40 HMG [Source:RefSeq peptide;Acc:NP_496970]
38. H02I12.1 cbd-1 297.00 2057.61 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
39. B0280.5 cpg-2 282.00 1953.69 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
40. C56C10.8 icd-1 282.00 1953.69 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
41. R13A5.8 rpl-9 282.00 1953.69 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
42. F28C6.7 rpl-26 279.00 1932.91 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
43. F28D1.7 rps-23 273.00 1891.34 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
44. K02B2.5 rps-25 256.00 1773.57 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
45. C14B9.7 rpl-21 251.00 1738.93 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
46. F53G12.5 mex-3 248.00 1718.14 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
47. F37C12.9 rps-14 243.00 1683.50 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
48. F02A9.3 far-2 238.00 1648.86 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
49. T01C3.6 rps-16 238.00 1648.86 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
50. M01F1.2 rpl-16 235.00 1628.08 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
51. F52E1.1 pos-1 233.00 1614.22 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
52. T06E6.2 cyb-3 230.00 1593.44 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
53. T19H12.2 T19H12.2 230.00 1593.44 Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O01615]
54. Y75B12B.2 cyn-7 230.00 1593.44 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
55. B0250.1 rpl-2 228.00 1579.58 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
56. F39B2.6 rps-26 228.00 1579.58 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
57. F54C9.5 rpl-5 228.00 1579.58 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
58. K11H12.2 rpl-15 228.00 1579.58 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
59. R151.3 rpl-6 225.00 1558.80 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
60. Y48B6A.2 rpl-43 221.00 1531.09 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
61. W08E12.7 W08E12.7 218.00 1510.30
62. B0513.3 rpl-29 214.00 1482.59 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
63. C34E10.6 atp-2 214.00 1482.59 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
64. K07H8.10 K07H8.10 214.00 1482.59
65. ZC395.10 ZC395.10 214.00 1482.59 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
66. ZC404.8 spn-4 214.00 1482.59 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
67. B0393.1 rps-0 211.00 1461.81 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
68. F40F8.10 rps-9 211.00 1461.81 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
69. K08D12.3 K08D12.3 211.00 1461.81
70. T05F1.3 rps-19 209.00 1447.95 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
71. C25A1.8 clec-87 207.00 1434.09 C-type lectin domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS3]
72. Y45F10D.12 rpl-18 204.00 1413.31 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
73. T23G11.3 gld-1 202.00 1399.45 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
74. C06B8.8 rpl-38 200.00 1385.60 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
75. T04C12.5 act-2 196.00 1357.89 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
76. C06A1.1 cdc-48.1 191.00 1323.25 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
77. C37A2.7 C37A2.7 189.00 1309.39 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
78. M7.1 let-70 189.00 1309.39 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
79. Y48G8AL.8 rpl-17 187.00 1295.53 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
80. T04C12.4 act-3 185.00 1281.68 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
81. T04C12.6 act-1 185.00 1281.68 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
82. ZC513.6 oma-2 183.00 1267.82
83. F53A3.3 rps-22 179.00 1240.11 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
84. Y57G11C.15 sec-61 177.00 1226.25 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
85. Y65B4BR.5 icd-2 177.00 1226.25 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
86. C44B12.5 perm-4 175.00 1212.40 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
87. ZK652.4 rpl-35 173.00 1198.54 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
88. F26D10.3 hsp-1 171.00 1184.69 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
89. R02F2.1 R02F2.1 171.00 1184.69
90. R08C7.3 htz-1 171.00 1184.69 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
91. Y106G6H.2 pab-1 171.00 1184.69 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
92. Y56A3A.21 trap-4 171.00 1184.69 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
93. Y113G7B.17 prmt-1 169.00 1170.83 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
94. Y18D10A.19 fkb-2 169.00 1170.83 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
95. C47E8.11 C47E8.11 165.00 1143.12
96. Y69A2AR.18 Y69A2AR.18 165.00 1143.12
97. C23G10.3 rps-3 163.00 1129.26 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
98. C32E8.2 rpl-13 162.00 1122.34 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
99. ZK1010.1 ubq-2 162.00 1122.34 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
100. F27C1.7 atp-3 160.00 1108.48 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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