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Experiment male4, region R6.

Sample reads: 3,653,288. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 26301.96 7199.56 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. F56E10.4 rps-27 20503.62 5612.40 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
3. F54E7.2 rps-12 19641.74 5376.48 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
4. C04F12.4 rpl-14 17908.29 4901.98 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
5. RIT1P.688 16782.51 4593.83
6. F42C5.8 rps-8 13594.03 3721.05 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
7. R13A5.8 rpl-9 13535.92 3705.15 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
8. F40F11.1 rps-11 12758.78 3492.42 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
9. F10B5.1 rpl-10 12625.62 3455.97 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
10. C42C1.14 rpl-34 12504.57 3422.84 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
11. F13B10.2 rpl-3 12381.10 3389.04 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
12. C49H3.11 rps-2 12368.99 3385.73 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
13. T04C12.6 act-1 12102.68 3312.83 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
14. ZC434.2 rps-7 12071.21 3304.22 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
15. E04A4.7 cyc-2.1 11962.26 3274.40 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
16. Y71F9AL.13 rpl-1 11938.05 3267.77 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
17. Y48B6A.2 rpl-43 11727.42 3210.11 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
18. D1007.6 rps-10 11705.63 3204.15 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
19. C14B9.7 rpl-21 11424.79 3127.28 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
20. Y24D9A.4 rpl-7A 11400.58 3120.65 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
21. F39B2.6 rps-26 11206.90 3067.63 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
22. R09B3.3 R09B3.3 11032.59 3019.92
23. B0041.4 rpl-4 11030.17 3019.26 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
24. F36A2.6 rps-15 10998.69 3010.64 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
25. Y82E9BR.3 Y82E9BR.3 10843.75 2968.23 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
26. K02B2.5 rps-25 10543.54 2886.05 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
27. W09C5.6 rpl-31 10504.81 2875.45 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
28. B0250.1 rpl-2 10332.91 2828.40 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
29. T07A9.14 T07A9.14 10315.97 2823.76
30. F40F8.10 rps-9 10158.60 2780.68 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
31. F28C6.7 rpl-26 10141.65 2776.05 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
32. Y105E8A.16 rps-20 10073.86 2757.49 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
33. T22F3.4 rpl-11.1 9921.34 2715.74 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
34. T04C12.4 act-3 9918.92 2715.08 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
35. C06B8.8 rpl-38 9911.66 2713.09 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
36. F28D1.7 rps-23 9901.97 2710.44 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
37. F37C12.9 rps-14 9817.24 2687.24 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
38. Y71A12B.1 rps-6 9730.08 2663.39 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
39. F52B5.6 rpl-25.2 9681.66 2650.13 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
40. F37C12.4 rpl-36 9628.40 2635.55 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
41. T01C3.6 rps-16 9408.08 2575.25 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
42. B0513.3 rpl-29 9328.19 2553.38 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
43. F02A9.3 far-2 9216.82 2522.89 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
44. Y45F10D.12 rpl-18 9204.72 2519.58 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
45. F53A3.3 rps-22 9197.46 2517.59 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
46. ZK1010.1 ubq-2 9151.46 2505.00 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
47. T05F1.3 rps-19 8887.56 2432.77 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
48. M01F1.2 rpl-16 8880.30 2430.78 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
49. T27E9.1 ant-1.1 8747.15 2394.33 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
50. C09H10.2 rpl-41 8589.78 2351.26 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
51. ZK652.4 rpl-35 8517.15 2331.37 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
52. K11H12.2 rpl-15 8480.83 2321.43 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
53. C37A2.7 C37A2.7 8212.10 2247.87 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
54. Y37E3.8 Y37E3.8 8037.79 2200.16
55. R151.3 rpl-6 7928.84 2170.34 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
56. F54C9.5 rpl-5 7904.63 2163.71 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
57. T24B8.1 rpl-32 7776.32 2128.59 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
58. T05E11.1 rps-5 7773.90 2127.93 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
59. Y57G11C.16 rps-18 7701.27 2108.05 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
60. F11G11.11 col-20 7519.69 2058.34 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
61. W01D2.1 W01D2.1 7425.27 2032.50 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
62. F10E7.7 rpl-33 7418.01 2030.51 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
63. B0393.1 rps-0 7398.64 2025.21 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
64. C26F1.4 rps-30 7379.27 2019.91 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
65. F25H2.5 ndk-1 7333.27 2007.31 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
66. C53B4.5 col-119 7255.80 1986.11 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
67. F26F12.1 col-140 7246.11 1983.46 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
68. F25H2.10 rla-0 7229.17 1978.82 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
69. T04C12.5 act-2 7188.01 1967.55 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
70. F56F3.5 rps-1 7185.59 1966.89 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
71. C16A3.9 rps-13 7004.01 1917.19 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
72. K02F2.2 ahcy-1 6895.07 1887.37 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
73. F37C12.11 rps-21 6800.65 1861.52 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
74. D1007.12 rpl-24.1 6790.96 1858.87 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
75. C27A2.2 rpl-22 6761.91 1850.92 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
76. Y48G8AL.8 rpl-17 6754.65 1848.93 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
77. F26D10.3 hsp-1 6747.38 1846.94 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
78. T05G5.10 iff-1 6682.02 1829.05 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
79. C32E8.2 rpl-13 6640.86 1817.78 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
80. Y37E3.7 rla-1 6483.49 1774.71 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
81. F11C3.3 unc-54 6476.23 1772.72 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
82. F53G12.10 rpl-7 6439.91 1762.78 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
83. Y106G6H.2 pab-1 6422.97 1758.14 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
84. Y43B11AR.4 rps-4 6391.49 1749.52 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
85. Y62E10A.1 rla-2 6246.23 1709.76 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
86. C53H9.1 rpl-27 6222.02 1703.14 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
87. C24F3.6 col-124 6202.65 1697.83 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
88. K08D12.6 K08D12.6 6159.08 1685.91
89. C47E8.11 C47E8.11 6156.65 1685.24
90. C23G10.3 rps-3 6151.81 1683.92 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
91. R11D1.8 rpl-28 6033.18 1651.45 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
92. H06I04.4 ubl-1 6004.13 1643.49 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
93. JC8.3 rpl-12 5916.97 1619.64 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
94. C34F6.3 col-179 5844.34 1599.76 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
95. C26F1.9 rpl-39 5834.66 1597.10 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
96. C34F6.2 col-178 5798.34 1587.16 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
97. C09D4.5 rpl-19 5711.19 1563.31 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
98. Y41D4B.5 rps-28 5699.08 1559.99 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
99. ZK1193.1 col-19 5648.24 1546.08 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
100. B0336.9 swp-1 5631.29 1541.44 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA