C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm4, region R9.

Sample reads: 590,892. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 2829.84 4789.10 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. F54E7.2 rps-12 2247.06 3802.83 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
3. Y24D9A.4 rpl-7A 2193.83 3712.74 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
4. F13B10.2 rpl-3 2136.39 3615.53 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
5. B0041.4 rpl-4 2056.54 3480.39 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
6. F42C5.8 rps-8 1976.69 3345.26 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
7. C49H3.11 rps-2 1839.40 3112.91 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
8. T27E9.1 ant-1.1 1730.12 2927.99 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
9. T04C12.4 act-3 1644.67 2783.37 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
10. T04C12.6 act-1 1590.03 2690.90 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
11. D1054.11 D1054.11 1587.23 2686.16
12. ZC434.2 rps-7 1525.59 2581.85 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
13. E04A4.7 cyc-2.1 1480.76 2505.98 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
14. F25H2.5 ndk-1 1455.55 2463.30 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
15. Y18D10A.17 car-1 1440.14 2437.22 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
16. Y71F9AL.13 rpl-1 1440.14 2437.22 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
17. F40F11.1 rps-11 1427.53 2415.89 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
18. F56E10.4 rps-27 1424.73 2411.14 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
19. R13A5.8 rpl-9 1405.11 2377.95 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
20. R05G6.7 vdac-1 1396.71 2363.73 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
21. W09C5.6 rpl-31 1388.30 2349.50 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
22. C04F12.4 rpl-14 1382.70 2340.02 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
23. RIT1P.688 1344.87 2276.01
24. Y105E8A.16 rps-20 1337.87 2264.15 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
25. F10B5.1 rpl-10 1336.47 2261.78 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
26. C07H6.5 cgh-1 1333.67 2257.04 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
27. B0250.1 rpl-2 1332.27 2254.67 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
28. Y71A12B.1 rps-6 1307.05 2211.99 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
29. K02F2.2 ahcy-1 1301.45 2202.51 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
30. F59D8.2 vit-4 1300.05 2200.14 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
31. F02A9.3 far-2 1279.03 2164.58 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
32. D1007.6 rps-10 1269.23 2147.98 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
33. Y82E9BR.3 Y82E9BR.3 1262.22 2136.13 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
34. M03F4.2 act-4 1246.81 2110.05 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
35. C42C1.14 rpl-34 1239.81 2098.19 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
36. K07H8.10 K07H8.10 1180.97 1998.62
37. T07A9.14 T07A9.14 1148.75 1944.09
38. F36A2.6 rps-15 1147.35 1941.72 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
39. F54C9.5 rpl-5 1141.74 1932.24 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
40. C44B12.5 perm-4 1139.14 1927.83 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
41. C14B9.7 rpl-21 1136.14 1922.75 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
42. C42D8.2 vit-2 1132.78 1917.06 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
43. Y45F10D.12 rpl-18 1119.33 1894.30 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
44. C56C10.8 icd-1 1113.72 1884.82 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
45. T22F3.4 rpl-11.1 1101.12 1863.48 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
46. M01F1.2 rpl-16 1096.91 1856.37 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
47. F39B2.6 rps-26 1070.30 1811.32 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
48. F28C6.7 rpl-26 1060.49 1794.73 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
49. D2096.8 nap-1 1056.29 1787.61 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
50. F52B5.6 rpl-25.2 1047.88 1773.39 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
51. F57F4.4 F57F4.4 1044.52 1767.70
52. B0393.1 rps-0 1040.88 1761.53 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
53. T04C12.5 act-2 1031.07 1744.94 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
54. Y106G6H.2 pab-1 1025.47 1735.46 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
55. Y62H9A.6 Y62H9A.6 1025.47 1735.46
56. F40F8.10 rps-9 1010.06 1709.38 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
57. F57B9.5 byn-1 1010.06 1709.38 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
58. K11H12.2 rpl-15 986.24 1669.07 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
59. W08E12.7 W08E12.7 969.43 1640.62
60. F46F11.2 cey-2 954.02 1614.54 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
61. Y57G11C.15 sec-61 933.01 1578.98 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
62. C34E10.6 atp-2 930.20 1574.24 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
63. F25H2.10 rla-0 928.80 1571.87 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
64. Y75B12B.2 cyn-7 928.80 1571.87 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
65. R151.3 rpl-6 924.60 1564.75 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
66. F11C3.3 unc-54 911.99 1543.42 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
67. Y48B6A.2 rpl-43 906.39 1533.93 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
68. T05F1.3 rps-19 903.59 1529.19 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
69. F01G4.6 F01G4.6 900.79 1524.45 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
70. R09B3.3 R09B3.3 895.18 1514.97
71. R10E11.8 vha-1 878.37 1486.52 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
72. Y69A2AR.18 Y69A2AR.18 872.77 1477.03
73. Y37D8A.19 Y37D8A.19 858.76 1453.33
74. K08D12.6 K08D12.6 856.10 1448.82
75. F37C12.4 rpl-36 848.95 1436.73 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
76. F28D1.7 rps-23 844.75 1429.62 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
77. T01C3.6 rps-16 843.35 1427.25 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
78. Y48B6A.14 hmg-1.1 843.35 1427.25 HMG [Source:RefSeq peptide;Acc:NP_496970]
79. F53G12.10 rpl-7 840.55 1422.50 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
80. K02B2.5 rps-25 839.15 1420.13 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
81. F56F3.5 rps-1 836.34 1415.39 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
82. M7.1 let-70 834.94 1413.02 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
83. H02I12.1 cbd-1 830.74 1405.91 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
84. C09H10.2 rpl-41 825.14 1396.43 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
85. F59D8.1 vit-3 825.14 1396.43 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
86. F26D10.3 hsp-1 820.93 1389.31 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
87. C08H9.2 vgln-1 816.73 1382.20 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
88. C17F4.7 C17F4.7 811.13 1372.72
89. Y43B11AR.4 rps-4 805.52 1363.23 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
90. F53A3.3 rps-22 804.12 1360.86 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
91. C06B8.8 rpl-38 802.72 1358.49 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
92. F37C12.9 rps-14 798.52 1351.38 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
93. F21F8.7 asp-6 796.56 1348.06 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
94. Y113G7B.17 prmt-1 792.92 1341.90 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
95. ZK652.4 rpl-35 791.51 1339.53 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
96. C47E8.11 C47E8.11 774.70 1311.07
97. K07H8.6 vit-6 773.30 1308.70 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
98. ZK813.3 ZK813.3 771.90 1306.33
99. T05E11.1 rps-5 752.29 1273.14 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
100. B0513.3 rpl-29 749.49 1268.40 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA