C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm3, region R8.

Sample reads: 808,215. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 4455.49 5512.75 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. F54E7.2 rps-12 4278.14 5293.32 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
3. RIT1P.688 3621.88 4481.33
4. F13B10.2 rpl-3 3444.54 4261.91 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
5. C04F12.4 rpl-14 3419.48 4230.90 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
6. F36A2.6 rps-15 3384.89 4188.11 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
7. F42C5.8 rps-8 3365.48 4164.09 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
8. F40F11.1 rps-11 3217.25 3980.69 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
9. Y24D9A.4 rpl-7A 3129.90 3872.61 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
10. E04A4.7 cyc-2.1 3048.55 3771.96 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
11. B0041.4 rpl-4 3043.97 3766.29 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
12. C49H3.11 rps-2 3041.14 3762.79 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
13. W09C5.6 rpl-31 2851.27 3527.86 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
14. T27E9.1 ant-1.1 2803.63 3468.91 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
15. T04C12.4 act-3 2712.92 3356.69 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
16. F10B5.1 rpl-10 2632.28 3256.91 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
17. F02A9.3 far-2 2621.34 3243.37 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
18. Y105E8A.16 rps-20 2578.11 3189.88 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
19. Y82E9BR.3 Y82E9BR.3 2561.70 3169.58 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
20. T04C12.6 act-1 2558.70 3165.86 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
21. R05G6.7 vdac-1 2541.76 3144.90 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
22. M03F4.2 act-4 2508.23 3103.42 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
23. C42C1.14 rpl-34 2503.64 3097.74 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
24. Y71A12B.1 rps-6 2494.99 3087.04 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
25. Y71F9AL.13 rpl-1 2420.70 2995.13 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
26. ZC434.2 rps-7 2399.35 2968.71 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
27. D1007.6 rps-10 2378.35 2942.72 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
28. R13A5.8 rpl-9 2346.24 2902.99 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
29. F25H2.5 ndk-1 2252.71 2787.27 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
30. F56E10.4 rps-27 2178.77 2695.79 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
31. C09H10.2 rpl-41 2157.07 2668.93 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
32. F11C3.3 unc-54 2150.72 2661.07 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
33. F28C6.7 rpl-26 2133.95 2640.33 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
34. F59D8.2 vit-4 2128.66 2633.78 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
35. F39B2.6 rps-26 2109.25 2609.76 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
36. K02F2.2 ahcy-1 2099.19 2597.32 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
37. C14B9.7 rpl-21 2058.07 2546.45 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
38. F52B5.6 rpl-25.2 2028.78 2510.20 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
39. F37C12.4 rpl-36 2022.96 2503.00 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
40. T07A9.14 T07A9.14 1994.02 2467.19
41. Y75B12B.2 cyn-7 1963.49 2429.42 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
42. C34E10.6 atp-2 1962.79 2428.54 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
43. C56C10.8 icd-1 1919.90 2375.49 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
44. F57F4.4 F57F4.4 1919.38 2374.83
45. B0513.3 rpl-29 1903.85 2355.62 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
46. K02B2.5 rps-25 1834.67 2270.03 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
47. K11H12.2 rpl-15 1833.62 2268.72 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
48. M01F1.2 rpl-16 1803.09 2230.95 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
49. D1086.10 D1086.10 1771.34 2191.67
50. F40F8.10 rps-9 1762.15 2180.30 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
51. Y48B6A.2 rpl-43 1758.97 2176.37 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
52. C42D8.2 vit-2 1758.27 2175.49 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
53. C08F11.11 C08F11.11 1732.29 2143.35 UPF0375 protein C08F11.11 [Source:UniProtKB/Swiss-Prot;Acc:O62053]
54. K07H8.10 K07H8.10 1723.93 2133.01
55. T22F3.4 rpl-11.1 1720.40 2128.64 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
56. F54C9.5 rpl-5 1704.80 2109.34 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
57. F01G12.5 let-2 1689.09 2089.91 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
58. T01C3.6 rps-16 1674.27 2071.57 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
59. C37C3.6 mig-6 1669.89 2066.15 Papilin [Source:UniProtKB/Swiss-Prot;Acc:O76840]
60. B0393.1 rps-0 1631.74 2018.95 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
61. Y45F10D.12 rpl-18 1625.74 2011.52 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
62. F53A3.3 rps-22 1621.68 2006.50 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
63. C06B8.8 rpl-38 1616.74 2000.39 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
64. R151.3 rpl-6 1606.86 1988.16 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
65. K08D12.3 K08D12.3 1599.80 1979.43
66. Y69A2AR.18 Y69A2AR.18 1586.22 1962.62
67. F28D1.7 rps-23 1582.86 1958.47 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
68. Y105E8B.1 lev-11 1570.16 1942.75 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
69. R10E11.8 vha-1 1533.28 1897.12 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
70. B0250.1 rpl-2 1521.98 1883.14 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
71. F37C12.9 rps-14 1511.04 1869.61 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
72. T05F1.3 rps-19 1510.16 1868.51 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
73. Y48G8AL.8 rpl-17 1477.73 1828.38 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
74. F01G4.6 F01G4.6 1466.93 1815.02 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
75. ZK652.4 rpl-35 1458.28 1804.32 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
76. R09B3.3 R09B3.3 1452.88 1797.64
77. K08D12.6 K08D12.6 1442.05 1784.24
78. C56G7.1 mlc-4 1421.93 1759.35 Myosin regulatory light chain [Source:UniProtKB/Swiss-Prot;Acc:Q09510]
79. F52B10.1 nmy-1 1419.30 1756.09 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_508504]
80. C37A2.7 C37A2.7 1409.29 1743.71 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
81. F56F3.5 rps-1 1386.46 1715.46 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
82. D2096.8 nap-1 1384.52 1713.06 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
83. Y66H1B.3 1378.63 1705.77
84. T07C4.5 ttr-15 1364.95 1688.85 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
85. RIT6P.22 1344.75 1663.85
86. F27C1.7 atp-3 1330.52 1646.25 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
87. T05E11.1 rps-5 1315.72 1627.93 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
88. Y106G6H.2 pab-1 1314.29 1626.16 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
89. F09F7.2 mlc-3 1309.88 1620.70 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
90. K07H8.6 vit-6 1304.48 1614.02 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
91. F52H3.7 lec-2 1303.52 1612.84 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
92. Y38H6C.1 dct-16 1294.52 1601.71 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
93. F07A5.7 unc-15 1286.41 1591.66 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
94. C26F1.4 rps-30 1281.01 1584.98 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
95. C16A3.9 rps-13 1280.87 1584.81 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
96. T25F10.6 clik-1 1273.35 1575.51 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
97. F53G12.10 rpl-7 1273.14 1575.25 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
98. Y37E3.8 Y37E3.8 1266.47 1566.99
99. ZK1010.1 ubq-2 1264.70 1564.81 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
100. Y57G11C.15 sec-61 1252.35 1549.53 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA