C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for Y87G2A.5

Gene ID Gene Name Reads Transcripts Annotation
Y87G2A.5 vars-2 22834 Y87G2A.5 Valine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q9U1Q4]

Genes with expression patterns similar to Y87G2A.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y87G2A.5 vars-2 22834 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Valine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q9U1Q4]
2. F25H5.4 eef-2 34846 7.562 0.881 0.913 0.956 0.913 0.985 0.977 0.981 0.956 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
3. C09D4.5 rpl-19 56944 7.504 0.859 0.906 0.960 0.906 0.988 0.985 0.985 0.915 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
4. B0336.9 swp-1 52442 7.492 0.872 0.902 0.967 0.902 0.978 0.990 0.982 0.899 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
5. T08B2.10 rps-17 38071 7.489 0.872 0.914 0.978 0.914 0.984 0.991 0.978 0.858 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
6. K04D7.1 rack-1 48949 7.487 0.839 0.903 0.969 0.903 0.990 0.973 0.985 0.925 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
7. Y62E10A.1 rla-2 59665 7.486 0.877 0.907 0.972 0.907 0.982 0.990 0.977 0.874 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
8. F17C11.9 eef-1G 37911 7.485 0.828 0.910 0.969 0.910 0.973 0.971 0.982 0.942 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
9. JC8.3 rpl-12 52728 7.484 0.867 0.900 0.963 0.900 0.985 0.960 0.981 0.928 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
10. F53A3.3 rps-22 81093 7.483 0.840 0.915 0.965 0.915 0.973 0.987 0.983 0.905 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
11. Y57G11C.16 rps-18 76576 7.48 0.876 0.906 0.963 0.906 0.982 0.972 0.968 0.907 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
12. T05F1.3 rps-19 88407 7.47 0.860 0.890 0.971 0.890 0.980 0.988 0.986 0.905 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
13. K04D7.2 mspn-1 48187 7.463 0.839 0.891 0.954 0.891 0.985 0.983 0.987 0.933 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
14. R74.1 lars-1 8467 7.46 0.857 0.914 0.971 0.914 0.969 0.979 0.922 0.934 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
15. C53H9.1 rpl-27 59496 7.45 0.855 0.888 0.940 0.888 0.983 0.981 0.981 0.934 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
16. Y43B11AR.4 rps-4 76546 7.449 0.860 0.904 0.941 0.904 0.982 0.976 0.976 0.906 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
17. Y37E3.9 phb-1 29211 7.447 0.867 0.884 0.982 0.884 0.943 0.972 0.962 0.953 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
18. R11D1.8 rpl-28 62242 7.447 0.859 0.898 0.944 0.898 0.975 0.984 0.985 0.904 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
19. B0464.1 dars-1 12331 7.435 0.861 0.872 0.968 0.872 0.975 0.964 0.978 0.945 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
20. F25H2.11 tct-1 41796 7.43 0.875 0.873 0.947 0.873 0.987 0.981 0.975 0.919 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
21. C26F1.9 rpl-39 51628 7.428 0.910 0.877 0.931 0.877 0.972 0.962 0.981 0.918 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
22. F56F3.5 rps-1 85503 7.427 0.827 0.910 0.959 0.910 0.974 0.984 0.976 0.887 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
23. C32E8.2 rpl-13 70096 7.422 0.827 0.888 0.968 0.888 0.981 0.974 0.982 0.914 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
24. Y37E3.7 rla-1 55876 7.42 0.843 0.896 0.937 0.896 0.985 0.951 0.989 0.923 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
25. T05E11.1 rps-5 79298 7.42 0.816 0.901 0.959 0.901 0.972 0.963 0.987 0.921 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
26. F54H12.6 eef-1B.1 37095 7.418 0.850 0.886 0.943 0.886 0.987 0.983 0.980 0.903 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
27. D1007.12 rpl-24.1 73724 7.417 0.823 0.903 0.961 0.903 0.975 0.987 0.986 0.879 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
28. T24B8.1 rpl-32 67285 7.407 0.878 0.906 0.960 0.906 0.989 0.880 0.990 0.898 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
29. Y39A1C.3 cey-4 50694 7.397 0.841 0.886 0.969 0.886 0.960 0.989 0.948 0.918 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
30. C26F1.4 rps-30 77534 7.394 0.826 0.895 0.933 0.895 0.988 0.985 0.978 0.894 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
31. B0412.4 rps-29 35461 7.393 0.885 0.854 0.928 0.854 0.982 0.974 0.980 0.936 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
32. C47E12.1 sars-1 4942 7.385 0.938 0.870 0.962 0.870 0.927 0.959 0.926 0.933 Probable serine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q18678]
33. Y22D7AL.5 hsp-60 42542 7.384 0.832 0.864 0.951 0.864 0.982 0.954 0.979 0.958 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
34. W08E3.3 ola-1 20885 7.384 0.816 0.864 0.959 0.864 0.967 0.986 0.959 0.969 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
35. D2013.7 eif-3.F 21004 7.383 0.823 0.855 0.979 0.855 0.976 0.991 0.964 0.940 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
36. ZK1010.1 ubq-2 87842 7.381 0.830 0.890 0.957 0.890 0.969 0.963 0.968 0.914 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
37. ZK652.4 rpl-35 89991 7.38 0.832 0.876 0.933 0.876 0.980 0.976 0.982 0.925 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
38. W10D9.5 tomm-22 7396 7.375 0.874 0.846 0.955 0.846 0.987 0.952 0.966 0.949 Translocase of Outer Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_493741]
39. T02G5.9 kars-1 9763 7.374 0.828 0.871 0.968 0.871 0.976 0.943 0.970 0.947 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
40. T08B2.9 fars-1 12650 7.371 0.808 0.873 0.953 0.873 0.935 0.985 0.986 0.958 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
41. Y41D4B.5 rps-28 46003 7.37 0.865 0.867 0.929 0.867 0.986 0.973 0.986 0.897 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
42. R151.3 rpl-6 89081 7.368 0.845 0.925 0.953 0.925 0.972 0.858 0.972 0.918 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
43. F22B5.9 fars-3 7209 7.365 0.802 0.865 0.957 0.865 0.970 0.968 0.982 0.956 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
44. F49C12.12 F49C12.12 38467 7.362 0.847 0.882 0.964 0.882 0.958 0.963 0.930 0.936
45. T24H7.1 phb-2 28775 7.362 0.818 0.866 0.960 0.866 0.982 0.950 0.965 0.955 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
46. F13G3.4 dylt-1 21345 7.359 0.803 0.870 0.939 0.870 0.967 0.984 0.961 0.965 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
47. F37C12.11 rps-21 62646 7.355 0.858 0.877 0.918 0.877 0.985 0.961 0.981 0.898 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
48. C42C1.14 rpl-34 146539 7.354 0.871 0.881 0.929 0.881 0.934 0.979 0.977 0.902 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
49. K07A12.7 mrps-15 6325 7.353 0.832 0.856 0.936 0.856 0.964 0.962 0.990 0.957 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
50. B0393.1 rps-0 89081 7.347 0.850 0.881 0.905 0.881 0.983 0.961 0.978 0.908 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
51. Y106G6H.3 rpl-30 54860 7.345 0.891 0.870 0.872 0.870 0.985 0.980 0.975 0.902 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492728]
52. C27A2.2 rpl-22 63091 7.344 0.836 0.871 0.945 0.871 0.980 0.954 0.987 0.900 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
53. F53G12.10 rpl-7 78552 7.343 0.817 0.877 0.942 0.877 0.975 0.981 0.977 0.897 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
54. T19B4.4 dnj-21 4956 7.341 0.868 0.871 0.924 0.871 0.981 0.954 0.928 0.944 Mitochondrial import inner membrane translocase subunit TIM14 [Source:UniProtKB/Swiss-Prot;Acc:P91454]
55. H21P03.1 mbf-1 25586 7.339 0.863 0.851 0.959 0.851 0.957 0.979 0.937 0.942 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
56. T16G1.11 eif-3.K 14014 7.336 0.806 0.849 0.963 0.849 0.985 0.968 0.982 0.934 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
57. H19N07.1 erfa-3 19869 7.336 0.811 0.858 0.944 0.858 0.986 0.983 0.942 0.954 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
58. C54C6.1 rpl-37 24379 7.333 0.831 0.860 0.928 0.860 0.982 0.976 0.983 0.913 60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622]
59. F55H2.6 clu-1 21404 7.332 0.802 0.870 0.970 0.870 0.963 0.946 0.954 0.957 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
60. W04B5.4 mrpl-30 4938 7.327 0.840 0.896 0.962 0.896 0.911 0.907 0.951 0.964 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497550]
61. Y43F8C.8 mrps-28 4036 7.326 0.818 0.885 0.970 0.885 0.960 0.931 0.924 0.953 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
62. C49H3.11 rps-2 152343 7.323 0.843 0.892 0.842 0.892 0.957 0.980 0.975 0.942 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
63. F40F8.10 rps-9 105818 7.32 0.860 0.904 0.930 0.904 0.865 0.982 0.953 0.922 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
64. K08F11.3 cif-1 10218 7.32 0.800 0.848 0.939 0.848 0.974 0.964 0.986 0.961 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
65. T05H4.6 erfa-1 12542 7.319 0.822 0.851 0.937 0.851 0.977 0.958 0.979 0.944 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
66. C41D11.2 eif-3.H 7520 7.318 0.857 0.858 0.967 0.858 0.944 0.974 0.960 0.900 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
67. F15D3.7 timm-23 14902 7.317 0.866 0.874 0.968 0.874 0.959 0.934 0.921 0.921 Translocase, Inner Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_492953]
68. C05D11.10 mrps-17 4613 7.31 0.845 0.844 0.954 0.844 0.964 0.935 0.953 0.971 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
69. Y54G11A.10 lin-7 6552 7.31 0.867 0.865 0.968 0.865 0.947 0.967 0.942 0.889
70. F28D1.7 rps-23 93860 7.31 0.854 0.888 0.938 0.888 0.976 0.868 0.978 0.920 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
71. F15D4.3 rmo-1 18517 7.305 0.867 0.859 0.942 0.859 0.954 0.945 0.953 0.926
72. T01E8.6 mrps-14 9328 7.303 0.804 0.852 0.963 0.852 0.949 0.949 0.972 0.962 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
73. T11G6.1 hars-1 7908 7.3 0.768 0.849 0.947 0.849 0.964 0.982 0.967 0.974 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
74. H06I04.4 ubl-1 57718 7.3 0.811 0.882 0.937 0.882 0.982 0.946 0.980 0.880 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
75. F01G4.6 F01G4.6 153459 7.292 0.843 0.940 0.877 0.940 0.951 0.929 0.905 0.907 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
76. Y40B1B.5 eif-3.J 15061 7.292 0.788 0.842 0.945 0.842 0.984 0.984 0.966 0.941 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
77. Y48B6A.2 rpl-43 104489 7.289 0.813 0.899 0.955 0.899 0.963 0.898 0.975 0.887 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
78. C56C10.8 icd-1 89788 7.289 0.771 0.845 0.962 0.845 0.981 0.961 0.980 0.944 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
79. C08F8.1 pfd-1 10199 7.287 0.830 0.850 0.937 0.850 0.944 0.967 0.963 0.946 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
80. T17E9.2 nmt-1 8017 7.285 0.817 0.851 0.943 0.851 0.960 0.939 0.961 0.963 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
81. ZK652.9 coq-5 5143 7.284 0.811 0.903 0.937 0.903 0.924 0.925 0.952 0.929 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34666]
82. F29C12.4 gfm-1 8964 7.284 0.813 0.865 0.971 0.865 0.949 0.936 0.939 0.946 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
83. F45E12.5 mrpl-14 4193 7.283 0.843 0.865 0.920 0.865 0.953 0.934 0.976 0.927 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495528]
84. Y24D9A.4 rpl-7A 176639 7.282 0.859 0.893 0.910 0.893 0.922 0.940 0.951 0.914 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
85. T21C9.12 scpl-4 14723 7.282 0.820 0.855 0.979 0.855 0.973 0.954 0.961 0.885 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
86. F39B2.6 rps-26 137659 7.281 0.852 0.895 0.924 0.895 0.891 0.963 0.960 0.901 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
87. M01F1.2 rpl-16 99563 7.28 0.821 0.887 0.934 0.887 0.984 0.873 0.986 0.908 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
88. Y65B4BR.5 icd-2 58321 7.28 0.811 0.853 0.958 0.853 0.958 0.955 0.964 0.928 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
89. C47D12.6 tars-1 23488 7.279 0.800 0.852 0.935 0.852 0.980 0.981 0.935 0.944 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
90. C18E9.6 tomm-40 13426 7.278 0.836 0.845 0.950 0.845 0.990 0.947 0.962 0.903 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
91. C23G10.3 rps-3 69779 7.277 0.797 0.884 0.928 0.884 0.960 0.939 0.981 0.904 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
92. B0261.4 mrpl-47 8210 7.277 0.833 0.829 0.931 0.829 0.952 0.974 0.976 0.953 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
93. F26F4.10 rars-1 9971 7.276 0.772 0.852 0.937 0.852 0.973 0.976 0.976 0.938 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
94. F28H1.3 aars-2 13537 7.276 0.772 0.847 0.925 0.847 0.962 0.978 0.966 0.979 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
95. T03D8.2 mrps-12 8253 7.275 0.796 0.841 0.947 0.841 0.966 0.945 0.957 0.982 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
96. T01E8.5 nrde-2 6768 7.275 0.759 0.913 0.963 0.913 0.972 0.902 0.935 0.918 Nuclear RNAi defective-2 protein [Source:UniProtKB/Swiss-Prot;Acc:G5EG51]
97. C34E10.11 mrps-26 4649 7.274 0.844 0.850 0.964 0.850 0.945 0.949 0.944 0.928 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
98. B0432.3 mrpl-41 5514 7.274 0.903 0.855 0.970 0.855 0.957 0.898 0.896 0.940 39S ribosomal protein L41, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90993]
99. R13A5.8 rpl-9 140064 7.273 0.802 0.888 0.945 0.888 0.966 0.903 0.982 0.899 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
100. M03C11.5 ymel-1 6878 7.272 0.796 0.868 0.950 0.868 0.927 0.943 0.968 0.952 ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]

There are 1338 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA