C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y67D2.1

Gene ID Gene Name Reads Transcripts Annotation
Y67D2.1 rep-1 855 Y67D2.1a.1, Y67D2.1a.2, Y67D2.1b.1, Y67D2.1b.2 Rab Escort Protein homolog [Source:RefSeq peptide;Acc:NP_001022928]

Genes with expression patterns similar to Y67D2.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y67D2.1 rep-1 855 6 1.000 1.000 - 1.000 1.000 1.000 - 1.000 Rab Escort Protein homolog [Source:RefSeq peptide;Acc:NP_001022928]
2. C35D10.16 arx-6 8242 5.504 0.943 0.917 - 0.917 0.880 0.959 - 0.888 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
3. Y69A2AR.2 ric-8 4224 5.482 0.909 0.966 - 0.966 0.894 0.908 - 0.839 Synembryn [Source:UniProtKB/Swiss-Prot;Acc:Q9GSX9]
4. Y37A1B.2 lst-4 11343 5.477 0.913 0.947 - 0.947 0.874 0.955 - 0.841 Sorting nexin lst-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4E2]
5. Y49A3A.1 cept-2 8916 5.458 0.916 0.955 - 0.955 0.844 0.927 - 0.861 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
6. Y73B6A.5 lin-45 10864 5.457 0.924 0.955 - 0.955 0.917 0.882 - 0.824 Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
7. K07C5.1 arx-2 20142 5.441 0.928 0.929 - 0.929 0.898 0.957 - 0.800 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
8. Y37D8A.1 arx-5 2599 5.44 0.908 0.953 - 0.953 0.868 0.901 - 0.857 Probable actin-related protein 2/3 complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV3]
9. T26A5.9 dlc-1 59038 5.435 0.912 0.938 - 0.938 0.885 0.959 - 0.803 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
10. B0285.1 cdk-12 5900 5.434 0.909 0.956 - 0.956 0.919 0.950 - 0.744 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
11. C28D4.2 cka-1 7191 5.393 0.955 0.890 - 0.890 0.894 0.882 - 0.882 Choline Kinase A [Source:RefSeq peptide;Acc:NP_501732]
12. C27B7.8 rap-1 11965 5.338 0.895 0.898 - 0.898 0.864 0.951 - 0.832 Ras-related protein Rap-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18246]
13. C37A2.2 pqn-20 10913 5.336 0.954 0.927 - 0.927 0.907 0.855 - 0.766 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
14. F18A1.6 alfa-1 2325 5.335 0.890 0.951 - 0.951 0.903 0.852 - 0.788 ALS/FTD Associated gene homolog [Source:RefSeq peptide;Acc:NP_495604]
15. T05B11.3 clic-1 19766 5.327 0.937 0.955 - 0.955 0.798 0.884 - 0.798 Clathrin LIght Chain [Source:RefSeq peptide;Acc:NP_504999]
16. Y65B4A.3 vps-20 8612 5.326 0.892 0.933 - 0.933 0.819 0.955 - 0.794 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_490762]
17. T05F1.1 nra-2 7101 5.323 0.950 0.925 - 0.925 0.890 0.849 - 0.784 Nicalin [Source:RefSeq peptide;Acc:NP_492553]
18. F46E10.9 dpy-11 16851 5.317 0.927 0.924 - 0.924 0.778 0.950 - 0.814 DumPY: shorter than wild-type [Source:RefSeq peptide;Acc:NP_504655]
19. Y92H12A.1 src-1 6186 5.316 0.906 0.945 - 0.945 0.872 0.961 - 0.687 Tyrosine protein-kinase src-1 [Source:UniProtKB/Swiss-Prot;Acc:G5EE56]
20. B0414.8 vps-51 1515 5.314 0.895 0.878 - 0.878 0.826 0.951 - 0.886 Vacuolar protein sorting-associated protein 51 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01839]
21. F59E12.13 fut-3 2309 5.309 0.927 0.954 - 0.954 0.875 0.778 - 0.821 FUcosyl Transferase [Source:RefSeq peptide;Acc:NP_495106]
22. R10E11.1 cbp-1 20447 5.292 0.944 0.951 - 0.951 0.798 0.930 - 0.718
23. R07B7.3 pqn-53 10459 5.291 0.919 0.875 - 0.875 0.890 0.953 - 0.779 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
24. Y69A2AR.6 vamp-7 4044 5.283 0.908 0.900 - 0.900 0.833 0.957 - 0.785 VAMP (Vesicle Associated Membrane Protein) homolog [Source:RefSeq peptide;Acc:NP_500232]
25. R11E3.8 dpf-5 8806 5.282 0.891 0.921 - 0.921 0.870 0.951 - 0.728 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_500647]
26. R01B10.5 jamp-1 10072 5.272 0.953 0.931 - 0.931 0.868 0.795 - 0.794 JAMP (JNK1-Associated Membrane Protein) homolog [Source:RefSeq peptide;Acc:NP_504568]
27. ZK1010.3 frg-1 3533 5.269 0.878 0.956 - 0.956 0.926 0.882 - 0.671 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
28. D2023.6 D2023.6 5595 5.259 0.841 0.952 - 0.952 0.884 0.882 - 0.748
29. Y54E10BL.6 mek-2 5042 5.255 0.851 0.870 - 0.870 0.912 0.955 - 0.797 Dual specificity mitogen-activated protein kinase kinase mek-2 [Source:UniProtKB/Swiss-Prot;Acc:Q10664]
30. F16A11.2 rtcb-1 2276 5.246 0.910 0.954 - 0.954 0.918 0.802 - 0.708 tRNA-splicing ligase RtcB homolog [Source:UniProtKB/Swiss-Prot;Acc:P90838]
31. Y37E11AM.3 Y37E11AM.3 2883 5.241 0.903 0.870 - 0.870 0.897 0.953 - 0.748
32. R07E5.11 R07E5.11 1170 5.24 0.936 0.840 - 0.840 0.913 0.961 - 0.750
33. T19B4.7 unc-40 5563 5.235 0.878 0.952 - 0.952 0.887 0.822 - 0.744 Unc-40 protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF96]
34. T26A5.7 set-1 6948 5.218 0.855 0.956 - 0.956 0.905 0.771 - 0.775 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
35. F57B10.10 dad-1 22596 5.216 0.921 0.950 - 0.950 0.782 0.897 - 0.716 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad-1 [Source:UniProtKB/Swiss-Prot;Acc:P52872]
36. R05G6.8 plc-4 2904 5.202 0.841 0.871 - 0.871 0.872 0.959 - 0.788 Phosphoinositide phospholipase C [Source:RefSeq peptide;Acc:NP_501213]
37. F32H2.4 thoc-3 3861 5.201 0.915 0.959 - 0.959 0.884 0.817 - 0.667 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
38. ZK858.1 gld-4 14162 5.199 0.946 0.953 - 0.953 0.870 0.829 - 0.648 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
39. Y39G10AR.20 tbca-1 4155 5.195 0.854 0.895 - 0.895 0.924 0.951 - 0.676 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
40. T22C1.6 T22C1.6 4918 5.182 0.850 0.953 - 0.953 0.811 0.858 - 0.757
41. F44B9.8 F44B9.8 1978 5.18 0.910 0.955 - 0.955 0.889 0.836 - 0.635 Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]
42. C06A5.1 inst-1 5068 5.171 0.922 0.953 - 0.953 0.846 0.847 - 0.650 INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
43. ZK1248.3 ehs-1 6059 5.166 0.892 0.951 - 0.951 0.774 0.869 - 0.729 Eps15 (endocytosis protein) Homologous Sequence [Source:RefSeq peptide;Acc:NP_001022499]
44. T20G5.1 chc-1 32620 5.126 0.954 0.945 - 0.945 0.731 0.850 - 0.701 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
45. C08B6.9 aos-1 3892 5.12 0.912 0.952 - 0.952 0.888 0.787 - 0.629 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
46. Y39A1B.3 dpy-28 4459 5.108 0.855 0.959 - 0.959 0.881 0.745 - 0.709 Condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_499379]
47. T20G5.11 rde-4 3966 5.097 0.917 0.952 - 0.952 0.896 0.771 - 0.609 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
48. F08F3.2 acl-6 2794 5.096 0.841 0.928 - 0.928 0.953 0.765 - 0.681 Probable glycerol-3-phosphate acyltransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22949]
49. Y46G5A.12 vps-2 5685 5.089 0.933 0.955 - 0.955 0.785 0.831 - 0.630 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
50. K07C5.8 cash-1 10523 5.086 0.910 0.960 - 0.960 0.831 0.765 - 0.660 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
51. ZK809.5 ZK809.5 5228 5.077 0.856 0.951 - 0.951 0.782 0.838 - 0.699
52. ZK20.3 rad-23 35070 5.049 0.923 0.953 - 0.953 0.788 0.813 - 0.619
53. Y39G10AR.13 icp-1 3445 5.033 0.891 0.958 - 0.958 0.901 0.691 - 0.634 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
54. C09H10.6 nasp-1 6094 5.01 0.913 0.951 - 0.951 0.865 0.729 - 0.601 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
55. K08B12.5 mrck-1 6384 5.007 0.867 0.954 - 0.954 0.867 0.769 - 0.596 Serine/threonine-protein kinase mrck-1 [Source:UniProtKB/Swiss-Prot;Acc:O01583]
56. Y66D12A.15 xpb-1 2246 5.005 0.873 0.952 - 0.952 0.852 0.811 - 0.565 human XPB (Xeroderma Pigmentosum complementation group B) related [Source:RefSeq peptide;Acc:NP_499487]
57. F33G12.3 F33G12.3 2383 5 0.855 0.955 - 0.955 0.790 0.735 - 0.710
58. C13F10.7 C13F10.7 6641 4.998 0.860 0.953 - 0.953 0.872 0.728 - 0.632
59. C13F10.4 soap-1 3986 4.976 0.803 0.950 - 0.950 0.847 0.794 - 0.632 Sorting Of Apical Proteins [Source:RefSeq peptide;Acc:NP_504828]
60. F17C11.10 F17C11.10 4355 4.967 0.912 0.954 - 0.954 0.859 0.707 - 0.581
61. C30C11.2 rpn-3 14437 4.964 0.955 0.943 - 0.943 0.777 0.716 - 0.630 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
62. ZK287.5 rbx-1 13546 4.949 0.935 0.951 - 0.951 0.802 0.720 - 0.590 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
63. T27A3.2 usp-5 11388 4.945 0.943 0.951 - 0.951 0.754 0.771 - 0.575 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
64. C55A6.9 pafo-1 2328 4.937 0.903 0.957 - 0.957 0.883 0.762 - 0.475 RNA polymerase II-associated factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90783]
65. C43G2.1 paqr-1 17585 4.921 0.957 0.912 - 0.912 0.731 0.778 - 0.631 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
66. C29E4.2 kle-2 5527 4.915 0.901 0.950 - 0.950 0.805 0.744 - 0.565 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
67. R07E5.3 snfc-5 2655 4.915 0.924 0.956 - 0.956 0.792 0.759 - 0.528 SNF chromatin remodeling Complex component [Source:RefSeq peptide;Acc:NP_497890]
68. M04F3.2 M04F3.2 835 4.906 0.950 0.865 - 0.865 0.826 0.777 - 0.623
69. R12E2.2 suco-1 10408 4.896 0.936 0.966 - 0.966 0.576 0.753 - 0.699 SUn (SUN) domain Containing Ossification factor homolog [Source:RefSeq peptide;Acc:NP_491321]
70. F45G2.3 exo-1 1969 4.88 0.873 0.950 - 0.950 0.834 0.736 - 0.537 EXOnuclease [Source:RefSeq peptide;Acc:NP_499770]
71. Y53G8AR.9 Y53G8AR.9 6571 4.879 0.680 0.950 - 0.950 0.826 0.844 - 0.629
72. C03D6.4 npp-14 4889 4.877 0.850 0.957 - 0.957 0.848 0.749 - 0.516 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
73. F21F3.7 F21F3.7 4924 4.829 0.953 0.922 - 0.922 0.658 0.774 - 0.600
74. T28F3.1 nra-1 7034 4.804 0.866 0.950 - 0.950 0.745 0.705 - 0.588 Nicotinic receptor-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB9]
75. Y44E3A.3 trx-4 4796 4.804 0.795 0.807 - 0.807 0.815 0.955 - 0.625 Thioredoxin [Source:RefSeq peptide;Acc:NP_491142]
76. F18A1.5 rpa-1 3109 4.789 0.877 0.957 - 0.957 0.775 0.691 - 0.532 Probable replication factor A 73 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19537]
77. F10G8.7 ercc-1 4210 4.787 0.905 0.951 - 0.951 0.765 0.710 - 0.505 ERCC (DNA excision repair protein) homolog [Source:RefSeq peptide;Acc:NP_492652]
78. F25B5.4 ubq-1 19910 4.784 0.937 0.953 - 0.953 0.607 0.687 - 0.647 Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71]
79. F36F2.4 syx-7 3556 4.783 0.858 0.954 - 0.954 0.649 0.789 - 0.579 SYntaXin [Source:RefSeq peptide;Acc:NP_492422]
80. B0334.4 B0334.4 8071 4.775 0.781 0.950 - 0.950 0.651 0.859 - 0.584
81. K07G5.2 xpa-1 1390 4.769 0.886 0.965 - 0.965 0.689 0.719 - 0.545 human XPA (Xeroderma pigmentosum comp grp A) related [Source:RefSeq peptide;Acc:NP_492025]
82. Y50D4A.2 wrb-1 3549 4.734 0.896 0.954 - 0.954 0.742 0.695 - 0.493 WRB (human W(tryptophan)-Rich Basic nuclear protein) homolog [Source:RefSeq peptide;Acc:NP_001255994]
83. Y39G10AR.14 mcm-4 4312 4.726 0.885 0.957 - 0.957 0.819 0.688 - 0.420 yeast MCM (licensing factor) related [Source:RefSeq peptide;Acc:NP_001293322]
84. C52E4.4 rpt-1 16724 4.717 0.896 0.951 - 0.951 0.705 0.697 - 0.517 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
85. ZK40.1 acl-9 4364 4.623 0.951 0.962 - 0.962 0.589 0.559 - 0.600 ACyLtransferase-like [Source:RefSeq peptide;Acc:NP_504644]
86. C41C4.8 cdc-48.2 7843 4.578 0.958 0.931 - 0.931 0.659 0.667 - 0.432 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
87. ZC168.3 orc-5 2186 4.533 0.885 0.953 - 0.953 0.668 0.602 - 0.472 ORC (Origin Recognition Complex) subunit [Source:RefSeq peptide;Acc:NP_001255506]
88. F26E4.10 drsh-1 2174 4.4 0.886 0.951 - 0.951 0.803 0.809 - - Ribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:O01326]
89. M02B7.5 bris-1 5153 4.385 0.906 0.954 - 0.954 0.741 0.830 - - BRag/Iqsec/Schizo related Arf GEF family member [Source:RefSeq peptide;Acc:NP_500420]
90. K01G5.7 tbb-1 26039 4.343 0.944 0.955 - 0.955 0.541 0.562 - 0.386 TuBulin, Beta [Source:RefSeq peptide;Acc:NP_499367]
91. K09H11.3 rga-3 6319 4.267 0.953 0.951 - 0.951 0.614 0.468 - 0.330 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_504503]
92. Y60A3A.9 Y60A3A.9 7429 4.259 0.740 0.882 - 0.882 0.777 0.978 - -
93. B0238.11 B0238.11 9926 3.915 0.958 0.875 - 0.875 0.532 0.405 - 0.270
94. C27A2.3 ify-1 13926 3.865 0.919 0.956 - 0.956 0.465 0.369 - 0.200 Interactor of FizzY protein [Source:RefSeq peptide;Acc:NP_494931]
95. F01G12.1 F01G12.1 0 3.636 0.953 - - - 0.862 0.951 - 0.870
96. T20D4.3 T20D4.3 0 3.597 0.939 - - - 0.870 0.957 - 0.831
97. Y38C1AA.6 Y38C1AA.6 0 3.596 0.882 - - - 0.923 0.962 - 0.829
98. F46C5.10 F46C5.10 2492 3.431 0.882 - - - 0.866 0.960 - 0.723
99. ZC412.10 ZC412.10 1629 3.263 0.773 - - - 0.854 0.953 - 0.683
100. Y53C10A.6 Y53C10A.6 2389 3.111 0.585 0.960 - 0.960 0.209 0.291 - 0.106

There are 16 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA