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Results for R07E5.3

Gene ID Gene Name Reads Transcripts Annotation
R07E5.3 snfc-5 2655 R07E5.3.1, R07E5.3.2 SNF chromatin remodeling Complex component [Source:RefSeq peptide;Acc:NP_497890]

Genes with expression patterns similar to R07E5.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R07E5.3 snfc-5 2655 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SNF chromatin remodeling Complex component [Source:RefSeq peptide;Acc:NP_497890]
2. C47G2.5 saps-1 7555 7.598 0.961 0.959 0.950 0.959 0.988 0.931 0.937 0.913 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
3. C13B4.2 usp-14 9000 7.562 0.975 0.950 0.945 0.950 0.969 0.903 0.957 0.913 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
4. C14B9.4 plk-1 18785 7.554 0.968 0.956 0.969 0.956 0.957 0.922 0.931 0.895 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
5. Y50D4A.2 wrb-1 3549 7.553 0.937 0.964 0.948 0.964 0.968 0.942 0.925 0.905 WRB (human W(tryptophan)-Rich Basic nuclear protein) homolog [Source:RefSeq peptide;Acc:NP_001255994]
6. F17C11.10 F17C11.10 4355 7.551 0.963 0.957 0.920 0.957 0.975 0.933 0.925 0.921
7. R01H2.6 ubc-18 13394 7.551 0.961 0.967 0.960 0.967 0.981 0.914 0.914 0.887 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
8. ZK287.5 rbx-1 13546 7.545 0.960 0.972 0.942 0.972 0.970 0.898 0.931 0.900 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
9. C09G4.3 cks-1 17852 7.544 0.968 0.961 0.955 0.961 0.965 0.904 0.913 0.917 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
10. B0334.5 B0334.5 4713 7.542 0.956 0.950 0.972 0.950 0.967 0.926 0.950 0.871
11. T21B10.5 set-17 5292 7.54 0.955 0.973 0.969 0.973 0.975 0.938 0.876 0.881 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_495902]
12. K08D12.1 pbs-1 21677 7.54 0.954 0.963 0.962 0.963 0.975 0.897 0.923 0.903 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
13. D2089.1 rsp-7 11057 7.539 0.938 0.950 0.949 0.950 0.983 0.949 0.909 0.911 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
14. T28D6.9 pen-2 2311 7.537 0.949 0.962 0.945 0.962 0.972 0.945 0.934 0.868 Gamma-secretase subunit pen-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U357]
15. F55B12.3 sel-10 10304 7.536 0.981 0.960 0.966 0.960 0.953 0.898 0.931 0.887 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
16. T10C6.4 srx-44 8454 7.527 0.965 0.952 0.959 0.952 0.984 0.922 0.893 0.900 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
17. T20H4.4 adr-2 5495 7.526 0.914 0.945 0.949 0.945 0.968 0.926 0.945 0.934 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
18. R06C7.1 wago-1 4303 7.524 0.952 0.945 0.952 0.945 0.947 0.956 0.930 0.897 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
19. Y46G5A.12 vps-2 5685 7.516 0.962 0.971 0.939 0.971 0.987 0.904 0.923 0.859 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
20. Y38A8.2 pbs-3 18117 7.516 0.953 0.950 0.948 0.950 0.976 0.920 0.903 0.916 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
21. ZK858.1 gld-4 14162 7.513 0.964 0.972 0.981 0.972 0.976 0.915 0.909 0.824 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
22. Y73F8A.34 tag-349 7966 7.511 0.968 0.970 0.972 0.970 0.941 0.932 0.879 0.879
23. F23F1.8 rpt-4 14303 7.51 0.961 0.967 0.953 0.967 0.967 0.906 0.937 0.852 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
24. Y113G7B.23 swsn-1 13766 7.506 0.935 0.955 0.935 0.955 0.983 0.904 0.932 0.907 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
25. C29E4.2 kle-2 5527 7.505 0.963 0.958 0.950 0.958 0.963 0.942 0.945 0.826 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
26. ZK20.3 rad-23 35070 7.504 0.958 0.956 0.947 0.956 0.975 0.889 0.921 0.902
27. F10G7.8 rpn-5 16014 7.501 0.969 0.952 0.951 0.952 0.965 0.859 0.928 0.925 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
28. Y50E8A.4 unc-61 8599 7.499 0.958 0.968 0.947 0.968 0.963 0.942 0.908 0.845
29. T12D8.6 mlc-5 19567 7.498 0.971 0.952 0.926 0.952 0.975 0.905 0.909 0.908 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
30. T06D8.8 rpn-9 11282 7.496 0.966 0.929 0.956 0.929 0.973 0.952 0.902 0.889 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
31. F59B2.7 rab-6.1 10749 7.496 0.959 0.923 0.943 0.923 0.986 0.919 0.937 0.906 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
32. Y77E11A.13 npp-20 5777 7.495 0.953 0.931 0.943 0.931 0.976 0.918 0.950 0.893 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
33. K07C5.8 cash-1 10523 7.494 0.958 0.968 0.944 0.968 0.961 0.915 0.912 0.868 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
34. H06H21.6 ubxn-6 9202 7.493 0.961 0.941 0.964 0.941 0.965 0.915 0.924 0.882 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
35. C12D8.10 akt-1 12100 7.493 0.971 0.948 0.959 0.948 0.952 0.887 0.938 0.890 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
36. B0205.1 B0205.1 2403 7.488 0.974 0.938 0.975 0.938 0.939 0.937 0.903 0.884
37. Y18D10A.20 pfn-1 33871 7.487 0.948 0.963 0.968 0.963 0.973 0.903 0.837 0.932 Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]
38. EEED8.7 rsp-4 13043 7.487 0.955 0.934 0.946 0.934 0.945 0.943 0.895 0.935 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
39. F37A4.8 isw-1 9337 7.486 0.961 0.969 0.948 0.969 0.970 0.917 0.925 0.827 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
40. F57C2.6 spat-1 5615 7.485 0.925 0.971 0.956 0.971 0.941 0.971 0.931 0.819 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
41. T06D8.6 cchl-1 26292 7.483 0.937 0.947 0.905 0.947 0.979 0.930 0.928 0.910 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
42. F23B2.6 aly-2 7301 7.483 0.941 0.943 0.956 0.943 0.974 0.920 0.898 0.908 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
43. F01G4.1 swsn-4 14710 7.483 0.948 0.950 0.963 0.950 0.944 0.917 0.933 0.878 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
44. F39H11.5 pbs-7 13631 7.482 0.950 0.943 0.950 0.943 0.977 0.916 0.923 0.880 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
45. CD4.6 pas-6 18332 7.481 0.957 0.945 0.943 0.945 0.974 0.902 0.910 0.905 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
46. T20F5.7 T20F5.7 5210 7.481 0.939 0.904 0.968 0.904 0.987 0.950 0.920 0.909
47. C25A1.5 C25A1.5 9135 7.48 0.922 0.939 0.929 0.939 0.985 0.928 0.952 0.886
48. Y53C12A.4 mop-25.2 7481 7.48 0.952 0.950 0.949 0.950 0.969 0.906 0.950 0.854 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
49. W09C5.2 unc-59 5784 7.479 0.923 0.966 0.974 0.966 0.942 0.895 0.932 0.881
50. T20F5.2 pbs-4 8985 7.476 0.958 0.939 0.955 0.939 0.956 0.924 0.916 0.889 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
51. T27A3.2 usp-5 11388 7.475 0.953 0.956 0.947 0.956 0.916 0.896 0.924 0.927 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
52. C09G12.9 tsg-101 9451 7.475 0.967 0.936 0.975 0.936 0.962 0.921 0.943 0.835 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
53. W02B12.2 rsp-2 14764 7.475 0.951 0.940 0.924 0.940 0.971 0.912 0.940 0.897 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
54. T28F3.1 nra-1 7034 7.474 0.881 0.970 0.941 0.970 0.951 0.892 0.952 0.917 Nicotinic receptor-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB9]
55. C17E4.5 pabp-2 12843 7.474 0.957 0.934 0.918 0.934 0.978 0.940 0.932 0.881 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
56. Y43C5A.6 rad-51 5327 7.472 0.948 0.926 0.963 0.926 0.969 0.935 0.932 0.873 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
57. Y110A7A.14 pas-3 6831 7.469 0.937 0.928 0.930 0.928 0.973 0.939 0.905 0.929 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
58. C10C6.6 catp-8 8079 7.469 0.928 0.951 0.932 0.951 0.979 0.930 0.929 0.869 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
59. F35B12.5 sas-5 4606 7.468 0.940 0.961 0.975 0.961 0.965 0.902 0.892 0.872 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
60. K11D2.3 unc-101 5587 7.467 0.924 0.934 0.899 0.934 0.978 0.925 0.956 0.917 AP-1 complex subunit mu-1-I [Source:UniProtKB/Swiss-Prot;Acc:P35602]
61. C36B1.3 rpb-3 4442 7.466 0.941 0.952 0.963 0.952 0.939 0.924 0.885 0.910 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
62. T14G10.7 hpo-5 3021 7.463 0.939 0.955 0.961 0.955 0.975 0.914 0.896 0.868
63. C18G1.4 pgl-3 5291 7.462 0.958 0.936 0.977 0.936 0.964 0.915 0.928 0.848 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
64. C39E9.13 rfc-3 9443 7.462 0.952 0.963 0.971 0.963 0.965 0.876 0.885 0.887 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
65. F16D3.2 rsd-6 8211 7.462 0.917 0.963 0.953 0.963 0.966 0.926 0.924 0.850
66. F33H1.2 gpd-4 5618 7.462 0.932 0.969 0.936 0.969 0.963 0.878 0.927 0.888 Glyceraldehyde-3-phosphate dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:P17331]
67. K12D12.1 top-2 18694 7.462 0.922 0.944 0.929 0.944 0.956 0.938 0.920 0.909 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
68. T01G1.3 sec-31 10504 7.46 0.917 0.938 0.927 0.938 0.983 0.939 0.892 0.926 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
69. Y71D11A.2 smr-1 4976 7.46 0.934 0.930 0.948 0.930 0.965 0.924 0.923 0.906 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
70. K10B2.1 lin-23 15896 7.458 0.963 0.960 0.956 0.960 0.963 0.890 0.929 0.837 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
71. R06C1.1 hda-3 1998 7.457 0.940 0.929 0.921 0.929 0.972 0.926 0.949 0.891 Histone deacetylase [Source:RefSeq peptide;Acc:NP_493026]
72. T05G5.3 cdk-1 14112 7.456 0.976 0.968 0.979 0.968 0.951 0.862 0.908 0.844 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
73. Y55D9A.1 efa-6 10012 7.456 0.925 0.940 0.961 0.940 0.960 0.958 0.955 0.817 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
74. K10C3.2 ensa-1 19836 7.454 0.962 0.963 0.966 0.963 0.963 0.895 0.893 0.849 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
75. F02E9.2 lin-28 4607 7.452 0.964 0.937 0.974 0.937 0.931 0.931 0.889 0.889
76. F18E2.3 scc-3 13464 7.452 0.951 0.933 0.943 0.933 0.969 0.922 0.942 0.859 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
77. C34G6.5 cdc-7 2956 7.451 0.920 0.967 0.955 0.967 0.979 0.879 0.918 0.866 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491705]
78. F44B9.8 F44B9.8 1978 7.45 0.956 0.978 0.935 0.978 0.960 0.911 0.875 0.857 Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]
79. C36B1.4 pas-4 13140 7.45 0.936 0.927 0.907 0.927 0.978 0.958 0.945 0.872 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
80. F58G11.1 letm-1 13414 7.449 0.952 0.944 0.919 0.944 0.962 0.932 0.924 0.872 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
81. C09G4.1 hyl-1 8815 7.449 0.949 0.942 0.934 0.942 0.964 0.936 0.918 0.864 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
82. T24F1.2 samp-1 8422 7.448 0.963 0.961 0.987 0.961 0.980 0.909 0.913 0.774 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
83. F58G11.2 rde-12 6935 7.448 0.968 0.943 0.957 0.943 0.965 0.923 0.872 0.877 DEAD-box ATP-dependent RNA helicase rde-12 [Source:UniProtKB/Swiss-Prot;Acc:P90897]
84. T24D1.4 tag-179 3757 7.447 0.953 0.951 0.936 0.951 0.945 0.936 0.889 0.886
85. T21E12.4 dhc-1 20370 7.446 0.948 0.926 0.930 0.926 0.983 0.909 0.917 0.907 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
86. F11A10.1 lex-1 13720 7.443 0.930 0.967 0.970 0.967 0.965 0.892 0.948 0.804 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
87. W01B6.9 ndc-80 4670 7.442 0.965 0.966 0.937 0.966 0.964 0.927 0.867 0.850 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
88. ZK973.3 pdp-1 3966 7.441 0.940 0.957 0.946 0.957 0.968 0.919 0.901 0.853 Pyruvate Dehydrogenase Phosphatase homolog [Source:RefSeq peptide;Acc:NP_491357]
89. C33H5.7 swd-2.2 2185 7.441 0.916 0.950 0.934 0.950 0.973 0.871 0.922 0.925 Set1 WD40 repeat protein homolog [Source:RefSeq peptide;Acc:NP_501280]
90. C02F5.9 pbs-6 20120 7.44 0.946 0.949 0.934 0.949 0.971 0.900 0.923 0.868 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
91. F10G8.3 rae-1 7542 7.439 0.925 0.947 0.927 0.947 0.952 0.913 0.888 0.940 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
92. C30B5.4 C30B5.4 5274 7.439 0.985 0.938 0.982 0.938 0.922 0.866 0.907 0.901
93. C05C8.4 gei-6 6026 7.439 0.943 0.939 0.973 0.939 0.968 0.938 0.904 0.835 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
94. T04A8.14 emb-5 11746 7.438 0.939 0.967 0.934 0.967 0.945 0.917 0.880 0.889 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
95. K10B2.5 ani-2 11397 7.437 0.950 0.966 0.971 0.966 0.970 0.864 0.925 0.825 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
96. W03F9.5 ttb-1 8682 7.437 0.947 0.953 0.953 0.953 0.960 0.933 0.893 0.845 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
97. F11A10.8 cpsf-4 2079 7.436 0.955 0.943 0.947 0.943 0.968 0.933 0.887 0.860 Cleavage and Polyadenylation Specificity Factor [Source:RefSeq peptide;Acc:NP_001023126]
98. F12F6.5 srgp-1 9048 7.436 0.888 0.963 0.970 0.963 0.960 0.890 0.931 0.871 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
99. F32D1.9 fipp-1 10239 7.436 0.950 0.940 0.939 0.940 0.939 0.939 0.919 0.870 Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
100. F12F6.3 rib-1 10524 7.435 0.934 0.961 0.969 0.961 0.971 0.872 0.923 0.844 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA