C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C52E4.4

Gene ID Gene Name Reads Transcripts Annotation
C52E4.4 rpt-1 16724 C52E4.4.1, C52E4.4.2 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]

Genes with expression patterns similar to C52E4.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C52E4.4 rpt-1 16724 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
2. F29G9.5 rpt-2 18618 7.841 0.981 0.976 0.977 0.976 0.990 0.983 0.980 0.978 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
3. F10G7.8 rpn-5 16014 7.822 0.983 0.979 0.982 0.979 0.979 0.989 0.953 0.978 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
4. C06A1.1 cdc-48.1 52743 7.792 0.965 0.966 0.967 0.966 0.989 0.986 0.970 0.983 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
5. C50C3.8 bath-42 18053 7.766 0.967 0.968 0.970 0.968 0.979 0.986 0.965 0.963 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
6. Y40B10A.1 lbp-9 30119 7.763 0.976 0.970 0.957 0.970 0.984 0.981 0.945 0.980 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
7. F49C12.8 rpn-7 15688 7.758 0.967 0.972 0.971 0.972 0.993 0.976 0.956 0.951 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
8. F23F1.8 rpt-4 14303 7.748 0.973 0.969 0.960 0.969 0.975 0.982 0.942 0.978 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
9. Y92C3B.2 uaf-1 14981 7.745 0.968 0.974 0.967 0.974 0.961 0.976 0.948 0.977 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
10. R12E2.3 rpn-8 11194 7.738 0.973 0.961 0.960 0.961 0.984 0.989 0.964 0.946 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
11. F16A11.3 ppfr-1 12640 7.733 0.970 0.966 0.961 0.966 0.978 0.983 0.972 0.937 Protein Phosphatase Four Regulatory subunit [Source:RefSeq peptide;Acc:NP_001122456]
12. H19N07.2 math-33 10570 7.733 0.964 0.970 0.959 0.970 0.954 0.981 0.961 0.974 Ubiquitin carboxyl-terminal hydrolase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q7JKC3]
13. T27A3.2 usp-5 11388 7.729 0.964 0.972 0.976 0.972 0.984 0.982 0.938 0.941 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
14. F56H1.4 rpt-5 16849 7.728 0.966 0.963 0.966 0.963 0.978 0.978 0.958 0.956 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
15. C30C11.2 rpn-3 14437 7.718 0.964 0.980 0.972 0.980 0.972 0.991 0.903 0.956 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
16. F55B12.3 sel-10 10304 7.71 0.952 0.974 0.936 0.974 0.980 0.986 0.929 0.979 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
17. C02F5.9 pbs-6 20120 7.707 0.967 0.964 0.964 0.964 0.968 0.982 0.920 0.978 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
18. F20G4.3 nmy-2 27210 7.706 0.963 0.973 0.962 0.973 0.984 0.977 0.926 0.948 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
19. D2030.2 D2030.2 6741 7.698 0.941 0.942 0.982 0.942 0.971 0.984 0.970 0.966
20. F59E12.5 npl-4.2 5567 7.697 0.964 0.971 0.948 0.971 0.978 0.969 0.941 0.955 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495094]
21. F30A10.10 usp-48 11536 7.696 0.945 0.958 0.967 0.958 0.981 0.986 0.935 0.966 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
22. Y49E10.1 rpt-6 7806 7.696 0.951 0.957 0.963 0.957 0.984 0.956 0.968 0.960 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_499609]
23. B0348.6 ife-3 26859 7.692 0.954 0.972 0.949 0.972 0.972 0.978 0.943 0.952 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
24. T21E12.4 dhc-1 20370 7.691 0.963 0.973 0.963 0.973 0.940 0.976 0.944 0.959 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
25. K11D9.1 klp-7 14582 7.684 0.930 0.963 0.965 0.963 0.964 0.978 0.960 0.961 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001022677]
26. C12D8.10 akt-1 12100 7.683 0.958 0.942 0.967 0.942 0.983 0.975 0.942 0.974 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
27. ZK287.5 rbx-1 13546 7.68 0.971 0.973 0.973 0.973 0.947 0.987 0.894 0.962 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
28. D1037.4 rab-8 14097 7.675 0.954 0.968 0.977 0.968 0.993 0.954 0.903 0.958 RAB family [Source:RefSeq peptide;Acc:NP_491199]
29. B0205.3 rpn-10 16966 7.667 0.950 0.953 0.961 0.953 0.974 0.953 0.970 0.953 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
30. C23G10.4 rpn-2 17587 7.663 0.960 0.971 0.969 0.971 0.986 0.969 0.907 0.930 26S proteasome non-ATPase regulatory subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18115]
31. F49D11.9 tag-296 7973 7.659 0.949 0.946 0.956 0.946 0.969 0.979 0.952 0.962
32. T09E8.1 noca-1 12494 7.658 0.954 0.966 0.971 0.966 0.977 0.985 0.908 0.931 NOn-Centrosomal microtubule Array [Source:RefSeq peptide;Acc:NP_872199]
33. K08E3.6 cyk-4 8158 7.658 0.955 0.970 0.948 0.970 0.949 0.967 0.962 0.937 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
34. F23F12.6 rpt-3 6433 7.657 0.963 0.965 0.937 0.965 0.979 0.963 0.936 0.949 Probable 26S protease regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502]
35. C13B4.2 usp-14 9000 7.656 0.962 0.976 0.964 0.976 0.942 0.975 0.907 0.954 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
36. C05C10.6 ufd-3 6304 7.656 0.941 0.965 0.975 0.965 0.957 0.951 0.939 0.963 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
37. F53C11.5 F53C11.5 7387 7.653 0.980 0.973 0.985 0.973 0.985 0.957 0.921 0.879
38. ZK858.7 ZK858.7 2817 7.653 0.927 0.959 0.963 0.959 0.977 0.981 0.943 0.944
39. Y94H6A.9 ubxn-2 7082 7.651 0.968 0.956 0.954 0.956 0.949 0.986 0.920 0.962 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
40. T05G5.3 cdk-1 14112 7.649 0.963 0.975 0.960 0.975 0.943 0.964 0.935 0.934 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
41. ZK353.8 ubxn-4 6411 7.649 0.930 0.956 0.965 0.956 0.955 0.984 0.940 0.963 UBX domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34631]
42. C03C10.1 kin-19 53180 7.648 0.933 0.952 0.952 0.952 0.978 0.976 0.942 0.963 Casein kinase I isoform alpha [Source:UniProtKB/Swiss-Prot;Acc:P42168]
43. C30B5.4 C30B5.4 5274 7.646 0.924 0.971 0.946 0.971 0.961 0.978 0.943 0.952
44. T20F5.2 pbs-4 8985 7.644 0.931 0.949 0.971 0.949 0.963 0.977 0.922 0.982 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
45. DY3.2 lmn-1 22449 7.644 0.961 0.968 0.961 0.968 0.938 0.942 0.950 0.956 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
46. W02B12.2 rsp-2 14764 7.643 0.922 0.952 0.954 0.952 0.951 0.976 0.960 0.976 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
47. F59E12.4 npl-4.1 3224 7.64 0.938 0.950 0.949 0.950 0.973 0.981 0.949 0.950 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495097]
48. F44A2.1 tag-153 16535 7.64 0.975 0.960 0.975 0.960 0.940 0.951 0.923 0.956
49. C34C12.3 pph-6 12139 7.639 0.944 0.946 0.948 0.946 0.986 0.985 0.933 0.951 Putative serine/threonine-protein phosphatase pph-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09496]
50. F52E1.13 lmd-3 25047 7.638 0.956 0.964 0.973 0.964 0.986 0.937 0.923 0.935 LysM Domain (peptidoglycan binding) protein [Source:RefSeq peptide;Acc:NP_872149]
51. Y54G9A.6 bub-3 9123 7.638 0.960 0.980 0.951 0.980 0.957 0.971 0.890 0.949 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
52. Y45F10D.9 sas-6 9563 7.638 0.943 0.955 0.963 0.955 0.980 0.974 0.943 0.925 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
53. Y119D3B.15 dss-1 19116 7.636 0.937 0.959 0.958 0.959 0.958 0.963 0.919 0.983 Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
54. F30A10.6 sac-1 4596 7.635 0.891 0.958 0.945 0.958 0.975 0.975 0.972 0.961 SAC1 PIP phosphatase (yeast Suppressor of ACtin) homolog [Source:RefSeq peptide;Acc:NP_492518]
55. T19A5.2 gck-1 7679 7.635 0.958 0.946 0.957 0.946 0.971 0.982 0.941 0.934 Germinal center kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:H2L099]
56. T22D1.9 rpn-1 25674 7.633 0.963 0.950 0.945 0.950 0.985 0.958 0.954 0.928 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_501064]
57. ZK20.3 rad-23 35070 7.632 0.970 0.971 0.955 0.971 0.944 0.955 0.889 0.977
58. R04F11.5 R04F11.5 4201 7.632 0.969 0.934 0.957 0.934 0.978 0.975 0.942 0.943
59. D2085.3 D2085.3 2166 7.631 0.983 0.906 0.964 0.906 0.973 0.986 0.943 0.970
60. B0464.5 spk-1 35112 7.63 0.983 0.963 0.955 0.963 0.965 0.961 0.903 0.937 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
61. F39H11.5 pbs-7 13631 7.63 0.946 0.979 0.968 0.979 0.946 0.961 0.882 0.969 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
62. C41C4.8 cdc-48.2 7843 7.628 0.936 0.957 0.950 0.957 0.974 0.974 0.934 0.946 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
63. F37A4.8 isw-1 9337 7.626 0.976 0.982 0.952 0.982 0.947 0.962 0.884 0.941 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
64. T16H12.5 bath-43 10021 7.621 0.930 0.947 0.972 0.947 0.987 0.986 0.922 0.930 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
65. C43G2.1 paqr-1 17585 7.62 0.944 0.943 0.971 0.943 0.962 0.974 0.916 0.967 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
66. F44E7.5 F44E7.5 1980 7.618 0.931 0.958 0.945 0.958 0.957 0.970 0.962 0.937
67. C03E10.4 gly-20 10739 7.618 0.943 0.946 0.973 0.946 0.969 0.976 0.936 0.929 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
68. K04G2.11 scbp-2 9123 7.618 0.963 0.957 0.956 0.957 0.968 0.967 0.898 0.952 SECIS (SeCis) Binding Protein homolog, partial [Source:RefSeq peptide;Acc:NP_492214]
69. C14B9.4 plk-1 18785 7.618 0.949 0.973 0.972 0.973 0.942 0.940 0.943 0.926 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
70. W08F4.8 cdc-37 23424 7.616 0.940 0.967 0.961 0.967 0.959 0.970 0.948 0.904 Probable Hsp90 co-chaperone cdc37 [Source:UniProtKB/Swiss-Prot;Acc:O02108]
71. M03D4.1 zen-4 8185 7.615 0.940 0.956 0.963 0.956 0.968 0.953 0.968 0.911 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
72. F09G2.8 F09G2.8 2899 7.615 0.966 0.961 0.976 0.961 0.980 0.951 0.902 0.918 Probable phospholipase D F09G2.8 [Source:UniProtKB/Swiss-Prot;Acc:O17405]
73. F01G4.1 swsn-4 14710 7.614 0.945 0.954 0.957 0.954 0.975 0.965 0.920 0.944 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
74. F23C8.4 ubxn-1 25368 7.614 0.933 0.934 0.925 0.934 0.978 0.987 0.951 0.972 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
75. T20G5.1 chc-1 32620 7.613 0.969 0.964 0.939 0.964 0.961 0.948 0.923 0.945 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
76. R11D1.1 R11D1.1 2431 7.61 0.961 0.924 0.978 0.924 0.984 0.982 0.938 0.919
77. D1022.7 aka-1 10681 7.61 0.950 0.973 0.973 0.973 0.962 0.956 0.895 0.928 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
78. H06H21.6 ubxn-6 9202 7.609 0.966 0.952 0.950 0.952 0.949 0.964 0.938 0.938 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
79. F11A10.4 mon-2 6726 7.608 0.960 0.936 0.950 0.936 0.968 0.974 0.939 0.945 Monensin-resistant homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19338]
80. Y71F9B.7 plk-2 6594 7.608 0.962 0.963 0.945 0.963 0.980 0.958 0.949 0.888 Serine/threonine-protein kinase plk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N2L7]
81. F32B6.8 tbc-3 9252 7.605 0.961 0.947 0.977 0.947 0.961 0.981 0.906 0.925 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
82. F25B4.7 F25B4.7 2461 7.602 0.954 0.937 0.962 0.937 0.978 0.963 0.926 0.945
83. C03B8.4 lin-13 7489 7.602 0.940 0.963 0.964 0.963 0.935 0.977 0.922 0.938 Zinc finger protein lin-13 [Source:UniProtKB/Swiss-Prot;Acc:Q11107]
84. ZK1248.10 tbc-2 5875 7.602 0.926 0.961 0.953 0.961 0.964 0.985 0.917 0.935 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_495156]
85. T09B4.2 T09B4.2 2820 7.601 0.931 0.964 0.958 0.964 0.964 0.984 0.914 0.922
86. F31D4.3 fkb-6 21313 7.6 0.959 0.952 0.937 0.952 0.940 0.959 0.929 0.972 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
87. C54G10.2 rfc-1 8814 7.6 0.914 0.973 0.952 0.973 0.977 0.969 0.902 0.940 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
88. F49E8.3 pam-1 25149 7.599 0.949 0.938 0.959 0.938 0.964 0.977 0.910 0.964
89. K08D12.1 pbs-1 21677 7.597 0.978 0.970 0.951 0.970 0.927 0.953 0.895 0.953 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
90. ZC518.2 sec-24.2 13037 7.596 0.975 0.949 0.952 0.949 0.956 0.969 0.909 0.937 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
91. K08F9.2 aipl-1 4352 7.595 0.931 0.971 0.980 0.971 0.950 0.953 0.902 0.937 AIP1 (Actin Interacting Protein 1) Like [Source:RefSeq peptide;Acc:NP_506733]
92. Y48B6A.14 hmg-1.1 88723 7.595 0.954 0.946 0.963 0.946 0.957 0.959 0.901 0.969 HMG [Source:RefSeq peptide;Acc:NP_496970]
93. E01A2.6 akir-1 25022 7.594 0.976 0.961 0.973 0.961 0.978 0.944 0.930 0.871 AKIRin (conserved nuclear protein family) homolog [Source:RefSeq peptide;Acc:NP_491304]
94. W10D5.3 gei-17 8809 7.591 0.975 0.967 0.972 0.967 0.974 0.964 0.903 0.869 E3 SUMO-protein ligase gei-17 [Source:UniProtKB/Swiss-Prot;Acc:Q94361]
95. ZC404.3 spe-39 7397 7.587 0.926 0.931 0.953 0.931 0.955 0.979 0.968 0.944 Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
96. K10C8.3 istr-1 14718 7.586 0.989 0.960 0.985 0.960 0.980 0.937 0.885 0.890 Increased Sodium Tolerance Related [Source:RefSeq peptide;Acc:NP_506170]
97. F21H12.6 tpp-2 4159 7.585 0.959 0.951 0.943 0.951 0.945 0.966 0.950 0.920 Tripeptidyl-peptidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09541]
98. Y75B7AL.4 rga-4 7903 7.585 0.938 0.959 0.978 0.959 0.970 0.960 0.924 0.897 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_001041201]
99. T09E8.3 cni-1 13269 7.584 0.920 0.954 0.938 0.954 0.967 0.968 0.938 0.945 Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22361]
100. Y71H2B.10 apb-1 10457 7.583 0.942 0.958 0.961 0.958 0.973 0.945 0.945 0.901 AP complex subunit beta [Source:RefSeq peptide;Acc:NP_001022937]

There are 2515 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA