C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F10G8.7

Gene ID Gene Name Reads Transcripts Annotation
F10G8.7 ercc-1 4210 F10G8.7.1, F10G8.7.2 ERCC (DNA excision repair protein) homolog [Source:RefSeq peptide;Acc:NP_492652]

Genes with expression patterns similar to F10G8.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F10G8.7 ercc-1 4210 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ERCC (DNA excision repair protein) homolog [Source:RefSeq peptide;Acc:NP_492652]
2. Y119D3B.15 dss-1 19116 7.624 0.962 0.949 0.945 0.949 0.987 0.968 0.933 0.931 Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
3. F55B12.3 sel-10 10304 7.62 0.980 0.968 0.948 0.968 0.976 0.964 0.909 0.907 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
4. F39H11.5 pbs-7 13631 7.596 0.962 0.956 0.974 0.956 0.980 0.958 0.930 0.880 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
5. B0205.1 B0205.1 2403 7.589 0.960 0.949 0.974 0.949 0.942 0.987 0.945 0.883
6. Y54G9A.6 bub-3 9123 7.589 0.940 0.951 0.966 0.951 0.976 0.989 0.947 0.869 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
7. B0348.6 ife-3 26859 7.586 0.983 0.946 0.974 0.946 0.977 0.990 0.898 0.872 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
8. Y40B10A.1 lbp-9 30119 7.578 0.959 0.961 0.979 0.961 0.977 0.961 0.872 0.908 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
9. ZK287.5 rbx-1 13546 7.577 0.954 0.966 0.946 0.966 0.970 0.973 0.902 0.900 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
10. R01H2.6 ubc-18 13394 7.576 0.983 0.952 0.927 0.952 0.986 0.982 0.881 0.913 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
11. Y48B6A.14 hmg-1.1 88723 7.574 0.933 0.927 0.977 0.927 0.951 0.988 0.958 0.913 HMG [Source:RefSeq peptide;Acc:NP_496970]
12. T20F5.2 pbs-4 8985 7.573 0.987 0.933 0.971 0.933 0.965 0.965 0.891 0.928 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
13. F10G7.8 rpn-5 16014 7.563 0.956 0.963 0.963 0.963 0.980 0.942 0.892 0.904 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
14. C03B8.4 lin-13 7489 7.563 0.933 0.967 0.971 0.967 0.965 0.975 0.864 0.921 Zinc finger protein lin-13 [Source:UniProtKB/Swiss-Prot;Acc:Q11107]
15. F37A4.8 isw-1 9337 7.562 0.947 0.962 0.983 0.962 0.985 0.993 0.870 0.860 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
16. K07C5.8 cash-1 10523 7.558 0.971 0.959 0.986 0.959 0.974 0.983 0.897 0.829 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
17. T09E8.3 cni-1 13269 7.556 0.975 0.954 0.935 0.954 0.976 0.956 0.931 0.875 Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22361]
18. T10C6.4 srx-44 8454 7.552 0.984 0.954 0.967 0.954 0.964 0.940 0.896 0.893 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
19. W02B12.2 rsp-2 14764 7.548 0.975 0.935 0.963 0.935 0.984 0.962 0.890 0.904 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
20. C35D10.7 C35D10.7 2964 7.539 0.937 0.960 0.975 0.960 0.944 0.953 0.911 0.899
21. F23F1.8 rpt-4 14303 7.535 0.973 0.962 0.978 0.962 0.973 0.962 0.843 0.882 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
22. Y92C3B.2 uaf-1 14981 7.534 0.962 0.949 0.961 0.949 0.976 0.980 0.873 0.884 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
23. W05B10.1 his-74 21926 7.53 0.970 0.938 0.963 0.938 0.992 0.973 0.889 0.867 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
24. C02F5.9 pbs-6 20120 7.525 0.959 0.943 0.965 0.943 0.972 0.967 0.879 0.897 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
25. F56H1.4 rpt-5 16849 7.524 0.965 0.952 0.991 0.952 0.975 0.938 0.884 0.867 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
26. ZK20.3 rad-23 35070 7.524 0.980 0.950 0.984 0.950 0.968 0.946 0.859 0.887
27. F17C11.10 F17C11.10 4355 7.523 0.961 0.962 0.980 0.962 0.962 0.954 0.906 0.836
28. K08D12.1 pbs-1 21677 7.522 0.971 0.956 0.970 0.956 0.967 0.950 0.894 0.858 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
29. F44A2.1 tag-153 16535 7.521 0.957 0.936 0.964 0.936 0.978 0.967 0.905 0.878
30. F18A1.5 rpa-1 3109 7.518 0.936 0.961 0.926 0.961 0.982 0.981 0.906 0.865 Probable replication factor A 73 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19537]
31. T05G5.3 cdk-1 14112 7.518 0.963 0.960 0.974 0.960 0.969 0.978 0.877 0.837 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
32. H06H21.6 ubxn-6 9202 7.516 0.963 0.943 0.987 0.943 0.972 0.971 0.894 0.843 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
33. C50C3.8 bath-42 18053 7.515 0.970 0.949 0.968 0.949 0.971 0.962 0.890 0.856 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
34. Y38A8.2 pbs-3 18117 7.511 0.981 0.957 0.977 0.957 0.963 0.940 0.875 0.861 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
35. C14B9.4 plk-1 18785 7.509 0.972 0.939 0.967 0.939 0.981 0.984 0.869 0.858 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
36. F31D4.3 fkb-6 21313 7.506 0.965 0.915 0.954 0.915 0.975 0.982 0.917 0.883 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
37. C09G4.3 cks-1 17852 7.506 0.971 0.935 0.961 0.935 0.951 0.940 0.941 0.872 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
38. F19B6.2 ufd-1 15357 7.504 0.975 0.928 0.934 0.928 0.949 0.953 0.942 0.895 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
39. Y110A7A.14 pas-3 6831 7.504 0.976 0.946 0.951 0.946 0.973 0.943 0.895 0.874 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
40. C42C1.12 C42C1.12 3010 7.503 0.959 0.943 0.937 0.943 0.977 0.946 0.891 0.907
41. CD4.6 pas-6 18332 7.501 0.964 0.939 0.955 0.939 0.969 0.971 0.888 0.876 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
42. W10D5.3 gei-17 8809 7.495 0.926 0.960 0.964 0.960 0.970 0.958 0.869 0.888 E3 SUMO-protein ligase gei-17 [Source:UniProtKB/Swiss-Prot;Acc:Q94361]
43. Y54E2A.11 eif-3.B 13795 7.495 0.950 0.924 0.939 0.924 0.975 0.968 0.953 0.862 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
44. T21E12.4 dhc-1 20370 7.493 0.951 0.948 0.980 0.948 0.983 0.961 0.837 0.885 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
45. T07E3.5 brc-2 3212 7.492 0.938 0.951 0.972 0.951 0.984 0.973 0.865 0.858 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_498502]
46. F30A10.10 usp-48 11536 7.489 0.973 0.913 0.989 0.913 0.977 0.981 0.809 0.934 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
47. K11D2.3 unc-101 5587 7.489 0.954 0.951 0.955 0.951 0.972 0.979 0.891 0.836 AP-1 complex subunit mu-1-I [Source:UniProtKB/Swiss-Prot;Acc:P35602]
48. F32D1.9 fipp-1 10239 7.488 0.977 0.931 0.957 0.931 0.951 0.980 0.900 0.861 Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
49. K01G5.9 K01G5.9 2321 7.486 0.964 0.941 0.966 0.941 0.951 0.932 0.887 0.904
50. K10D2.4 emb-1 3182 7.481 0.967 0.913 0.937 0.913 0.957 0.974 0.961 0.859
51. EEED8.7 rsp-4 13043 7.481 0.947 0.923 0.954 0.923 0.967 0.979 0.931 0.857 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
52. F02E9.2 lin-28 4607 7.475 0.959 0.909 0.956 0.909 0.950 0.973 0.935 0.884
53. T12D8.3 acbp-5 6816 7.475 0.950 0.952 0.955 0.952 0.933 0.961 0.940 0.832 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
54. F59B2.7 rab-6.1 10749 7.473 0.979 0.926 0.981 0.926 0.977 0.963 0.891 0.830 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
55. F59A3.4 F59A3.4 11625 7.473 0.940 0.943 0.993 0.943 0.961 0.978 0.873 0.842
56. F39B2.2 uev-1 13597 7.471 0.951 0.952 0.961 0.952 0.968 0.890 0.942 0.855 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
57. T20F5.7 T20F5.7 5210 7.47 0.914 0.912 0.987 0.912 0.982 0.980 0.931 0.852
58. T05F1.6 hsr-9 13312 7.469 0.949 0.959 0.986 0.959 0.958 0.977 0.889 0.792
59. T10B5.6 knl-3 3516 7.468 0.965 0.926 0.973 0.926 0.961 0.989 0.892 0.836 Kinetochore NuLl [Source:RefSeq peptide;Acc:NP_503520]
60. F41H10.6 hda-6 3325 7.467 0.978 0.936 0.949 0.936 0.951 0.977 0.938 0.802 Histone deacetylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20296]
61. Y110A7A.17 mat-1 3797 7.466 0.923 0.931 0.957 0.931 0.975 0.968 0.893 0.888 Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_001021714]
62. F56A8.6 cpf-2 2730 7.465 0.956 0.975 0.959 0.975 0.936 0.973 0.877 0.814 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
63. F44B9.8 F44B9.8 1978 7.463 0.949 0.945 0.960 0.945 0.957 0.931 0.924 0.852 Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]
64. M7.2 klc-1 4706 7.462 0.969 0.926 0.969 0.926 0.972 0.971 0.889 0.840 Kinesin Light Chain [Source:RefSeq peptide;Acc:NP_001255535]
65. T01G9.4 npp-2 5361 7.462 0.909 0.946 0.960 0.946 0.971 0.948 0.949 0.833 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
66. R12E2.3 rpn-8 11194 7.461 0.967 0.943 0.958 0.943 0.957 0.945 0.859 0.889 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
67. C25A1.5 C25A1.5 9135 7.461 0.937 0.919 0.967 0.919 0.983 0.977 0.884 0.875
68. DY3.2 lmn-1 22449 7.461 0.973 0.942 0.963 0.942 0.968 0.945 0.818 0.910 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
69. F09G2.8 F09G2.8 2899 7.46 0.970 0.945 0.970 0.945 0.967 0.936 0.868 0.859 Probable phospholipase D F09G2.8 [Source:UniProtKB/Swiss-Prot;Acc:O17405]
70. C08C3.4 cyk-7 12075 7.459 0.957 0.933 0.968 0.933 0.968 0.978 0.886 0.836 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
71. ZC168.3 orc-5 2186 7.456 0.926 0.975 0.971 0.975 0.954 0.956 0.871 0.828 ORC (Origin Recognition Complex) subunit [Source:RefSeq peptide;Acc:NP_001255506]
72. T27A3.2 usp-5 11388 7.454 0.969 0.958 0.974 0.958 0.945 0.954 0.834 0.862 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
73. T06D8.8 rpn-9 11282 7.453 0.969 0.927 0.961 0.927 0.962 0.967 0.872 0.868 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
74. C07D10.2 bath-44 6288 7.452 0.931 0.921 0.951 0.921 0.975 0.973 0.885 0.895 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_495550]
75. Y48A6B.11 rsa-2 1931 7.45 0.931 0.955 0.913 0.955 0.974 0.978 0.860 0.884 Regulator of Spindle Assembly [Source:RefSeq peptide;Acc:NP_001022886]
76. W03F9.5 ttb-1 8682 7.45 0.957 0.945 0.969 0.945 0.969 0.979 0.893 0.793 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
77. C13F10.6 C13F10.6 1811 7.45 0.950 0.914 0.940 0.914 0.980 0.946 0.887 0.919
78. F39B2.11 mtx-1 8526 7.449 0.967 0.929 0.966 0.929 0.959 0.932 0.917 0.850 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
79. F40G9.3 ubc-20 16785 7.449 0.959 0.940 0.942 0.940 0.970 0.949 0.894 0.855 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
80. M117.2 par-5 64868 7.449 0.944 0.907 0.920 0.907 0.959 0.961 0.942 0.909 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
81. K08F9.2 aipl-1 4352 7.448 0.929 0.953 0.960 0.953 0.981 0.982 0.849 0.841 AIP1 (Actin Interacting Protein 1) Like [Source:RefSeq peptide;Acc:NP_506733]
82. T20G5.11 rde-4 3966 7.447 0.952 0.971 0.974 0.971 0.937 0.946 0.920 0.776 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
83. C52E4.4 rpt-1 16724 7.447 0.935 0.961 0.949 0.961 0.949 0.959 0.828 0.905 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
84. W01B6.9 ndc-80 4670 7.446 0.957 0.956 0.954 0.956 0.958 0.980 0.892 0.793 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
85. Y73F8A.34 tag-349 7966 7.445 0.954 0.971 0.976 0.971 0.934 0.958 0.895 0.786
86. F21C3.3 hint-1 7078 7.444 0.944 0.913 0.931 0.913 0.969 0.938 0.938 0.898 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
87. F20D12.1 csr-1 16351 7.443 0.913 0.938 0.960 0.938 0.983 0.975 0.877 0.859 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
88. Y18D10A.20 pfn-1 33871 7.441 0.946 0.933 0.970 0.933 0.978 0.922 0.881 0.878 Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]
89. T12D8.6 mlc-5 19567 7.441 0.976 0.948 0.958 0.948 0.965 0.906 0.855 0.885 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
90. Y71G12B.1 chaf-2 3451 7.44 0.939 0.959 0.939 0.959 0.952 0.945 0.922 0.825 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
91. B0432.2 djr-1.1 8628 7.44 0.933 0.922 0.918 0.922 0.965 0.991 0.928 0.861 Glutathione-independent glyoxalase DJR-1.1 [Source:UniProtKB/Swiss-Prot;Acc:P90994]
92. C29H12.1 rars-2 3803 7.439 0.948 0.941 0.946 0.941 0.976 0.983 0.855 0.849 arginyl(R) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_495227]
93. C36B1.4 pas-4 13140 7.438 0.979 0.928 0.955 0.928 0.968 0.965 0.871 0.844 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
94. C30C11.2 rpn-3 14437 7.436 0.964 0.958 0.969 0.958 0.955 0.943 0.853 0.836 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
95. B0464.5 spk-1 35112 7.436 0.934 0.946 0.968 0.946 0.964 0.947 0.877 0.854 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
96. F18E2.3 scc-3 13464 7.436 0.952 0.937 0.970 0.937 0.970 0.966 0.889 0.815 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
97. D1037.4 rab-8 14097 7.436 0.958 0.954 0.974 0.954 0.969 0.906 0.813 0.908 RAB family [Source:RefSeq peptide;Acc:NP_491199]
98. C16A11.6 fbxc-44 1910 7.436 0.961 0.980 0.956 0.980 0.904 0.903 0.880 0.872 F-box C protein [Source:RefSeq peptide;Acc:NP_494746]
99. D1054.2 pas-2 11518 7.435 0.982 0.923 0.939 0.923 0.960 0.961 0.879 0.868 Proteasome subunit alpha type-2 [Source:UniProtKB/Swiss-Prot;Acc:Q27488]
100. F26E4.1 sur-6 16191 7.435 0.932 0.947 0.944 0.947 0.962 0.945 0.892 0.866 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]

There are 2248 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA