C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y40D12A.1

Gene ID Gene Name Reads Transcripts Annotation
Y40D12A.1 Y40D12A.1 2030 Y40D12A.1a, Y40D12A.1b

Genes with expression patterns similar to Y40D12A.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y40D12A.1 Y40D12A.1 2030 2 - 1.000 - 1.000 - - - -
2. Y73B6BL.3 exos-2 2624 1.964 - 0.982 - 0.982 - - - - EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
3. F29C4.7 grld-1 5426 1.96 - 0.980 - 0.980 - - - - Glutamate Receptor Level Decreased [Source:RefSeq peptide;Acc:NP_741283]
4. T27F2.1 skp-1 3532 1.958 - 0.979 - 0.979 - - - - mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
5. ZK632.10 ZK632.10 28231 1.956 - 0.978 - 0.978 - - - - UPF0057 membrane protein ZK632.10 [Source:UniProtKB/Swiss-Prot;Acc:P34655]
6. Y110A2AR.2 ubc-15 15884 1.956 - 0.978 - 0.978 - - - - UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_494397]
7. K04G7.11 K04G7.11 6153 1.954 - 0.977 - 0.977 - - - - Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
8. Y57G11C.9 Y57G11C.9 5293 1.954 - 0.977 - 0.977 - - - -
9. T19A5.1 T19A5.1 4360 1.954 - 0.977 - 0.977 - - - -
10. C27A2.6 dsh-2 2481 1.952 - 0.976 - 0.976 - - - - LOW QUALITY PROTEIN: DiSHevelled related [Source:RefSeq peptide;Acc:NP_494937]
11. C34D4.12 cyn-12 7363 1.952 - 0.976 - 0.976 - - - - CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
12. K08D9.3 apx-1 7784 1.952 - 0.976 - 0.976 - - - - Anterior pharynx in excess protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41990]
13. T09A5.7 T09A5.7 5907 1.95 - 0.975 - 0.975 - - - -
14. T10C6.4 srx-44 8454 1.95 - 0.975 - 0.975 - - - - Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
15. T07D4.3 rha-1 5898 1.95 - 0.975 - 0.975 - - - - Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
16. F44G4.1 F44G4.1 4086 1.95 - 0.975 - 0.975 - - - - Brix domain-containing protein F44G4.1 [Source:UniProtKB/Swiss-Prot;Acc:P54073]
17. F25H2.4 F25H2.4 3895 1.948 - 0.974 - 0.974 - - - -
18. D2096.2 praf-3 18471 1.948 - 0.974 - 0.974 - - - - Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
19. F56C9.3 F56C9.3 7447 1.946 - 0.973 - 0.973 - - - -
20. Y62E10A.11 mdt-9 5971 1.946 - 0.973 - 0.973 - - - - MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
21. T21C9.4 T21C9.4 5937 1.946 - 0.973 - 0.973 - - - - Enhancer of rudimentary homolog [Source:UniProtKB/Swiss-Prot;Acc:Q22640]
22. C18H9.3 C18H9.3 9681 1.946 - 0.973 - 0.973 - - - - GYF domain-containing protein C18H9.3 [Source:UniProtKB/Swiss-Prot;Acc:Q09237]
23. Y37E3.3 rpb-10 4051 1.946 - 0.973 - 0.973 - - - - DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
24. R09B3.4 ubc-12 7667 1.944 - 0.972 - 0.972 - - - - NEDD8-conjugating enzyme ubc-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVK5]
25. C25A1.4 C25A1.4 15507 1.944 - 0.972 - 0.972 - - - -
26. F44B9.5 F44B9.5 4875 1.944 - 0.972 - 0.972 - - - - Ancient ubiquitous protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34426]
27. R01H2.6 ubc-18 13394 1.944 - 0.972 - 0.972 - - - - UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
28. F12F6.5 srgp-1 9048 1.944 - 0.972 - 0.972 - - - - Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
29. Y40B10A.1 lbp-9 30119 1.944 - 0.972 - 0.972 - - - - Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
30. T16H12.4 T16H12.4 3288 1.944 - 0.972 - 0.972 - - - - General transcription factor IIH subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P34567]
31. ZK287.5 rbx-1 13546 1.944 - 0.972 - 0.972 - - - - RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
32. C47E12.2 C47E12.2 2898 1.944 - 0.972 - 0.972 - - - -
33. K07H8.3 daf-31 10678 1.942 - 0.971 - 0.971 - - - - N-alpha-acetyltransferase daf-31 [Source:UniProtKB/Swiss-Prot;Acc:O61219]
34. W06E11.4 sbds-1 6701 1.942 - 0.971 - 0.971 - - - - Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
35. C15H11.4 dhs-22 21674 1.942 - 0.971 - 0.971 - - - - DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
36. W05F2.6 W05F2.6 7609 1.942 - 0.971 - 0.971 - - - -
37. H06H21.11 H06H21.11 3653 1.942 - 0.971 - 0.971 - - - -
38. B0464.6 B0464.6 3542 1.94 - 0.970 - 0.970 - - - -
39. T12D8.3 acbp-5 6816 1.94 - 0.970 - 0.970 - - - - Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
40. Y23H5A.3 Y23H5A.3 4195 1.94 - 0.970 - 0.970 - - - -
41. T20H4.4 adr-2 5495 1.94 - 0.970 - 0.970 - - - - Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
42. E04F6.5 acdh-12 6267 1.94 - 0.970 - 0.970 - - - - Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_001022062]
43. K01G5.4 ran-1 32379 1.94 - 0.970 - 0.970 - - - - GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
44. ZK546.13 mdt-4 4080 1.94 - 0.970 - 0.970 - - - - Mediator of RNA polymerase II transcription subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23523]
45. R11E3.6 eor-1 2839 1.94 - 0.970 - 0.970 - - - - EOR-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDU4]
46. F11A10.5 F11A10.5 8554 1.94 - 0.970 - 0.970 - - - - Protein ST7 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19337]
47. F23H11.1 bra-2 7561 1.938 - 0.969 - 0.969 - - - - BMP Receptor Associated protein family [Source:RefSeq peptide;Acc:NP_497292]
48. ZK328.2 eftu-2 7040 1.938 - 0.969 - 0.969 - - - - Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
49. Y47G6A.8 crn-1 3494 1.938 - 0.969 - 0.969 - - - - Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
50. C56A3.5 C56A3.5 2260 1.938 - 0.969 - 0.969 - - - -
51. Y38A8.2 pbs-3 18117 1.938 - 0.969 - 0.969 - - - - Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
52. M01E5.5 top-1 25458 1.938 - 0.969 - 0.969 - - - - DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
53. B0464.7 baf-1 10161 1.938 - 0.969 - 0.969 - - - - Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
54. T01E8.6 mrps-14 9328 1.938 - 0.969 - 0.969 - - - - Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
55. C09G12.9 tsg-101 9451 1.938 - 0.969 - 0.969 - - - - Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
56. W03F9.10 W03F9.10 7361 1.938 - 0.969 - 0.969 - - - -
57. ZK20.5 rpn-12 9173 1.938 - 0.969 - 0.969 - - - - 26S proteasome non-ATPase regulatory subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q23449]
58. F52C12.3 tsen-54 496 1.938 - 0.969 - 0.969 - - - - Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_500146]
59. Y51H1A.6 mcd-1 3250 1.938 - 0.969 - 0.969 - - - - Modifier of Cell Death phenotype [Source:RefSeq peptide;Acc:NP_001254412]
60. K07D4.3 rpn-11 8834 1.938 - 0.969 - 0.969 - - - - 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
61. F41H10.6 hda-6 3325 1.938 - 0.969 - 0.969 - - - - Histone deacetylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20296]
62. Y71H2B.2 Y71H2B.2 7536 1.938 - 0.969 - 0.969 - - - -
63. E02D9.1 E02D9.1 10394 1.936 - 0.968 - 0.968 - - - -
64. F56D1.4 clr-1 8615 1.936 - 0.968 - 0.968 - - - - Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
65. Y46G5A.12 vps-2 5685 1.936 - 0.968 - 0.968 - - - - related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
66. F35G12.12 F35G12.12 5761 1.936 - 0.968 - 0.968 - - - -
67. R53.2 dtmk-1 6821 1.936 - 0.968 - 0.968 - - - - Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
68. T23B3.1 T23B3.1 12084 1.936 - 0.968 - 0.968 - - - -
69. C44B9.4 athp-1 1278 1.936 - 0.968 - 0.968 - - - - AT Hook plus PHD finger transcription factor [Source:RefSeq peptide;Acc:NP_499397]
70. Y59A8B.10 Y59A8B.10 5873 1.936 - 0.968 - 0.968 - - - -
71. T16G12.6 T16G12.6 4579 1.936 - 0.968 - 0.968 - - - -
72. C56C10.3 vps-32.1 24107 1.936 - 0.968 - 0.968 - - - - related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495337]
73. K08E3.8 mdt-29 4678 1.936 - 0.968 - 0.968 - - - - Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
74. F45H11.2 ned-8 13247 1.936 - 0.968 - 0.968 - - - - NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
75. F46B6.3 smg-4 4959 1.936 - 0.968 - 0.968 - - - - Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
76. C44B7.2 C44B7.2 3742 1.936 - 0.968 - 0.968 - - - -
77. F08B4.7 F08B4.7 7729 1.936 - 0.968 - 0.968 - - - - U1 small nuclear ribonucleoprotein C [Source:UniProtKB/Swiss-Prot;Acc:P90815]
78. F46F11.1 F46F11.1 5655 1.936 - 0.968 - 0.968 - - - - Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Source:UniProtKB/Swiss-Prot;Acc:P91309]
79. B0361.6 B0361.6 3112 1.936 - 0.968 - 0.968 - - - - Putative methyltransferase B0361.6 [Source:UniProtKB/Swiss-Prot;Acc:Q10950]
80. Y14H12B.1 Y14H12B.1 8987 1.936 - 0.968 - 0.968 - - - -
81. F23F1.8 rpt-4 14303 1.936 - 0.968 - 0.968 - - - - Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
82. C48B4.6 C48B4.6 4197 1.936 - 0.968 - 0.968 - - - -
83. W01A8.5 tofu-5 5678 1.934 - 0.967 - 0.967 - - - - Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
84. C48E7.3 lpd-2 10330 1.934 - 0.967 - 0.967 - - - - LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
85. D2030.8 D2030.8 2645 1.934 - 0.967 - 0.967 - - - -
86. Y32F6A.3 pap-1 11972 1.934 - 0.967 - 0.967 - - - - Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
87. C08B11.2 hda-2 2313 1.934 - 0.967 - 0.967 - - - - Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
88. F23F1.10 F23F1.10 3354 1.934 - 0.967 - 0.967 - - - -
89. CD4.6 pas-6 18332 1.934 - 0.967 - 0.967 - - - - Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
90. T11G6.5 T11G6.5 9723 1.934 - 0.967 - 0.967 - - - -
91. T16G1.11 eif-3.K 14014 1.934 - 0.967 - 0.967 - - - - Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
92. ZK686.4 snu-23 9040 1.934 - 0.967 - 0.967 - - - - Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
93. T20F5.2 pbs-4 8985 1.934 - 0.967 - 0.967 - - - - Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
94. Y65B4BL.3 Y65B4BL.3 6152 1.934 - 0.967 - 0.967 - - - -
95. C43E11.3 met-1 7581 1.934 - 0.967 - 0.967 - - - - Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]
96. F22D6.3 nars-1 18624 1.934 - 0.967 - 0.967 - - - - Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
97. F22B5.10 F22B5.10 8038 1.934 - 0.967 - 0.967 - - - -
98. W01G7.3 rpb-11 7826 1.934 - 0.967 - 0.967 - - - - Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
99. Y47D3A.16 rsks-1 16858 1.934 - 0.967 - 0.967 - - - - Ribosomal protein S6 kinase [Source:RefSeq peptide;Acc:NP_499447]
100. C53D5.6 imb-3 28921 1.932 - 0.966 - 0.966 - - - - IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]

There are 715 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA