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Results for ZK546.13

Gene ID Gene Name Reads Transcripts Annotation
ZK546.13 mdt-4 4080 ZK546.13 Mediator of RNA polymerase II transcription subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23523]

Genes with expression patterns similar to ZK546.13

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK546.13 mdt-4 4080 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mediator of RNA polymerase II transcription subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23523]
2. T05C12.7 cct-1 41264 7.565 0.973 0.966 0.931 0.966 0.945 0.916 0.942 0.926 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
3. T21B10.7 cct-2 13999 7.545 0.972 0.952 0.943 0.952 0.939 0.893 0.964 0.930 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
4. K07D4.3 rpn-11 8834 7.54 0.919 0.967 0.931 0.967 0.951 0.953 0.953 0.899 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
5. T24F1.1 raga-1 16171 7.531 0.944 0.956 0.944 0.956 0.939 0.962 0.944 0.886 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
6. C07G2.3 cct-5 44703 7.53 0.971 0.950 0.917 0.950 0.932 0.928 0.956 0.926 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
7. F01F1.8 cct-6 29460 7.517 0.967 0.963 0.913 0.963 0.930 0.908 0.957 0.916 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
8. Y73B6BL.32 lsm-8 11002 7.502 0.983 0.960 0.952 0.960 0.937 0.931 0.877 0.902 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
9. T21B10.1 mrpl-50 14595 7.5 0.958 0.959 0.928 0.959 0.939 0.899 0.946 0.912 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
10. C15H11.4 dhs-22 21674 7.497 0.957 0.990 0.935 0.990 0.940 0.919 0.875 0.891 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
11. C08F8.1 pfd-1 10199 7.494 0.967 0.959 0.917 0.959 0.928 0.943 0.914 0.907 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
12. F43G9.5 cfim-1 9169 7.493 0.964 0.960 0.932 0.960 0.923 0.919 0.939 0.896 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
13. K07C5.1 arx-2 20142 7.486 0.953 0.968 0.956 0.968 0.940 0.911 0.910 0.880 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
14. Y41D4B.13 ced-2 10100 7.483 0.914 0.972 0.923 0.972 0.926 0.954 0.920 0.902 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
15. R07E5.14 rnp-4 11659 7.479 0.954 0.961 0.938 0.961 0.932 0.932 0.948 0.853 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
16. M01B12.3 arx-7 7584 7.478 0.936 0.959 0.944 0.959 0.949 0.928 0.933 0.870 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
17. C38C10.2 slc-17.2 6819 7.477 0.908 0.947 0.910 0.947 0.967 0.963 0.947 0.888 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
18. C16A11.3 C16A11.3 3250 7.468 0.963 0.964 0.939 0.964 0.919 0.957 0.934 0.828
19. Y62E10A.11 mdt-9 5971 7.463 0.972 0.974 0.935 0.974 0.928 0.928 0.878 0.874 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
20. C52E4.3 snr-4 19308 7.459 0.981 0.952 0.912 0.952 0.950 0.931 0.874 0.907 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
21. Y55F3AM.12 dcap-1 8679 7.453 0.964 0.974 0.942 0.974 0.892 0.897 0.954 0.856 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
22. Y40G12A.1 ubh-3 4142 7.446 0.961 0.959 0.940 0.959 0.896 0.930 0.923 0.878 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
23. ZK863.6 dpy-30 16177 7.445 0.948 0.978 0.930 0.978 0.939 0.912 0.911 0.849 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
24. K11D12.2 pqn-51 15951 7.444 0.965 0.967 0.929 0.967 0.941 0.920 0.883 0.872 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
25. R06A4.4 imb-2 10302 7.438 0.937 0.972 0.923 0.972 0.922 0.901 0.921 0.890 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
26. T19B4.2 npp-7 13073 7.437 0.965 0.965 0.923 0.965 0.927 0.904 0.910 0.878 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
27. W06E11.4 sbds-1 6701 7.437 0.934 0.969 0.954 0.969 0.916 0.880 0.901 0.914 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
28. F59E12.11 sam-4 8179 7.435 0.967 0.962 0.951 0.962 0.939 0.908 0.884 0.862
29. F38A5.1 odr-8 5283 7.435 0.950 0.959 0.932 0.959 0.935 0.905 0.893 0.902 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
30. T20D3.7 vps-26 9349 7.434 0.973 0.957 0.943 0.957 0.867 0.937 0.921 0.879 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
31. ZK616.6 perm-3 16186 7.433 0.974 0.982 0.936 0.982 0.936 0.921 0.854 0.848 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
32. K07A1.12 lin-53 15817 7.433 0.920 0.974 0.938 0.974 0.898 0.930 0.941 0.858 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
33. F21C3.4 rde-2 6286 7.432 0.944 0.974 0.943 0.974 0.890 0.885 0.924 0.898
34. B0285.1 cdk-12 5900 7.431 0.956 0.970 0.952 0.970 0.953 0.911 0.847 0.872 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
35. C34E10.2 gop-2 5684 7.43 0.958 0.971 0.937 0.971 0.898 0.897 0.918 0.880 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
36. T26E3.3 par-6 8650 7.429 0.938 0.980 0.904 0.980 0.939 0.955 0.840 0.893 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
37. D2023.6 D2023.6 5595 7.429 0.945 0.966 0.924 0.966 0.934 0.922 0.878 0.894
38. F54A3.3 cct-3 25183 7.428 0.972 0.934 0.886 0.934 0.943 0.919 0.936 0.904 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
39. F43G6.9 patr-1 23000 7.428 0.870 0.971 0.904 0.971 0.937 0.944 0.902 0.929 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
40. C41C4.6 ulp-4 13338 7.424 0.897 0.959 0.964 0.959 0.888 0.915 0.934 0.908 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
41. K08E7.1 eak-7 18960 7.423 0.945 0.967 0.912 0.967 0.935 0.954 0.861 0.882 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
42. Y55F3AR.3 cct-8 17979 7.421 0.977 0.943 0.927 0.943 0.891 0.909 0.942 0.889 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
43. Y41C4A.10 elb-1 9743 7.421 0.933 0.952 0.924 0.952 0.937 0.936 0.903 0.884 ELongin B [Source:RefSeq peptide;Acc:NP_499517]
44. C25A1.4 C25A1.4 15507 7.42 0.960 0.977 0.934 0.977 0.923 0.915 0.888 0.846
45. B0261.4 mrpl-47 8210 7.42 0.954 0.948 0.931 0.948 0.943 0.893 0.905 0.898 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
46. C18E9.3 szy-20 6819 7.418 0.966 0.948 0.947 0.948 0.910 0.903 0.912 0.884 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
47. B0205.9 B0205.9 3651 7.418 0.964 0.960 0.895 0.960 0.927 0.933 0.918 0.861
48. C49H3.10 xpo-3 9101 7.417 0.933 0.954 0.952 0.954 0.859 0.920 0.917 0.928 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
49. ZK177.8 ZK177.8 3403 7.417 0.921 0.932 0.966 0.932 0.942 0.888 0.941 0.895
50. C55A6.2 ttll-5 5158 7.417 0.937 0.962 0.923 0.962 0.923 0.918 0.911 0.881 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
51. H21P03.1 mbf-1 25586 7.416 0.970 0.972 0.919 0.972 0.954 0.925 0.865 0.839 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
52. F56F3.1 ifet-1 25772 7.415 0.973 0.960 0.920 0.960 0.929 0.916 0.884 0.873 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
53. Y116A8C.42 snr-1 17062 7.415 0.980 0.974 0.936 0.974 0.923 0.858 0.922 0.848 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
54. C25D7.8 otub-1 7941 7.414 0.975 0.974 0.945 0.974 0.932 0.909 0.837 0.868 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
55. D2023.5 mpst-1 10328 7.414 0.963 0.955 0.892 0.955 0.919 0.915 0.924 0.891 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
56. T10B5.5 cct-7 24616 7.413 0.938 0.965 0.907 0.965 0.935 0.905 0.906 0.892 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
57. F13G3.4 dylt-1 21345 7.413 0.962 0.964 0.919 0.964 0.954 0.926 0.840 0.884 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
58. Y41D4B.19 npp-8 12992 7.411 0.917 0.968 0.931 0.968 0.916 0.926 0.913 0.872 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
59. F26F4.11 rpb-8 7601 7.409 0.959 0.956 0.927 0.956 0.940 0.905 0.892 0.874 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
60. T06G6.9 pfd-3 10945 7.408 0.967 0.953 0.923 0.953 0.941 0.868 0.898 0.905 Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
61. D2013.2 wdfy-2 7286 7.408 0.959 0.965 0.944 0.965 0.936 0.929 0.804 0.906 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
62. B0205.11 mrpl-9 9162 7.406 0.965 0.948 0.914 0.948 0.949 0.934 0.873 0.875 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
63. T03F6.5 lis-1 8818 7.406 0.972 0.938 0.902 0.938 0.931 0.928 0.900 0.897 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
64. T10B11.3 ztf-4 5161 7.406 0.894 0.974 0.950 0.974 0.942 0.923 0.911 0.838 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
65. F53F10.5 npp-11 3378 7.404 0.934 0.972 0.951 0.972 0.923 0.900 0.873 0.879 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
66. C43E11.10 cdc-6 5331 7.404 0.937 0.954 0.940 0.954 0.913 0.870 0.925 0.911 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
67. W02D3.2 dhod-1 3816 7.404 0.946 0.942 0.863 0.942 0.933 0.952 0.901 0.925 Dihydroorotate dehydrogenase (quinone), mitochondrial [Source:RefSeq peptide;Acc:NP_491930]
68. C36A4.5 maph-1.3 15493 7.401 0.881 0.955 0.921 0.955 0.908 0.922 0.958 0.901 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
69. B0303.15 mrpl-11 9889 7.399 0.976 0.949 0.932 0.949 0.927 0.926 0.901 0.839 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
70. W06H3.3 ctps-1 8363 7.398 0.968 0.936 0.901 0.936 0.943 0.905 0.925 0.884 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
71. F09G2.9 attf-2 14771 7.398 0.959 0.973 0.939 0.973 0.894 0.907 0.921 0.832 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
72. T12G3.5 mrpl-51 5192 7.395 0.965 0.942 0.933 0.942 0.910 0.942 0.885 0.876 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
73. ZC410.2 mppb-1 3991 7.393 0.953 0.935 0.924 0.935 0.921 0.916 0.905 0.904 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
74. F33D4.7 emc-6 6534 7.392 0.958 0.938 0.933 0.938 0.926 0.944 0.892 0.863 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
75. B0464.7 baf-1 10161 7.391 0.966 0.974 0.916 0.974 0.917 0.923 0.870 0.851 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
76. F32A5.7 lsm-4 3785 7.388 0.955 0.957 0.938 0.957 0.916 0.928 0.902 0.835 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
77. C53A5.3 hda-1 18413 7.385 0.928 0.965 0.928 0.965 0.919 0.920 0.904 0.856 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
78. T26A5.9 dlc-1 59038 7.383 0.951 0.962 0.938 0.962 0.932 0.914 0.871 0.853 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
79. R151.9 pfd-5 6951 7.381 0.964 0.925 0.936 0.925 0.928 0.937 0.912 0.854 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
80. Y116A8C.34 cyn-13 2972 7.379 0.965 0.955 0.941 0.955 0.899 0.935 0.882 0.847 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
81. C34D4.12 cyn-12 7363 7.379 0.948 0.980 0.933 0.980 0.903 0.871 0.946 0.818 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
82. F55F10.1 F55F10.1 9760 7.379 0.952 0.919 0.904 0.919 0.930 0.938 0.919 0.898 Midasin [Source:RefSeq peptide;Acc:NP_500551]
83. R09B3.5 mag-1 7496 7.379 0.941 0.952 0.957 0.952 0.901 0.933 0.885 0.858 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
84. Y47D3A.27 teg-1 5171 7.378 0.898 0.960 0.917 0.960 0.922 0.922 0.916 0.883 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_499455]
85. K08F4.2 gtbp-1 25222 7.377 0.969 0.951 0.916 0.951 0.917 0.869 0.942 0.862 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
86. F40F8.9 lsm-1 5917 7.377 0.926 0.951 0.898 0.951 0.898 0.934 0.941 0.878 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_496385]
87. C06A1.5 rpb-6 7515 7.377 0.960 0.958 0.933 0.958 0.912 0.881 0.898 0.877 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
88. Y57E12AL.5 mdt-6 3828 7.377 0.934 0.959 0.931 0.959 0.889 0.914 0.924 0.867 Mediator of RNA polymerase II transcription subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N337]
89. F53E4.1 F53E4.1 7979 7.375 0.913 0.962 0.954 0.962 0.898 0.924 0.913 0.849
90. K03B4.2 K03B4.2 21796 7.374 0.966 0.973 0.921 0.973 0.890 0.895 0.890 0.866
91. F08F8.3 kap-1 31437 7.372 0.978 0.957 0.939 0.957 0.926 0.890 0.863 0.862 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
92. W08E3.3 ola-1 20885 7.372 0.958 0.946 0.876 0.946 0.936 0.947 0.879 0.884 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
93. T01E8.6 mrps-14 9328 7.37 0.963 0.968 0.887 0.968 0.934 0.913 0.878 0.859 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
94. F43C1.6 mrpl-21 2778 7.37 0.959 0.957 0.857 0.957 0.918 0.906 0.948 0.868 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
95. C48B6.3 C48B6.3 6610 7.368 0.968 0.935 0.928 0.935 0.913 0.919 0.887 0.883
96. T03F1.2 coq-4 3093 7.368 0.958 0.941 0.931 0.941 0.920 0.936 0.894 0.847 Ubiquinone biosynthesis protein coq-4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P91428]
97. W08E3.1 snr-2 14849 7.367 0.973 0.946 0.944 0.946 0.869 0.888 0.923 0.878 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
98. T19A6.3 nepr-1 6606 7.367 0.956 0.968 0.932 0.968 0.876 0.917 0.891 0.859 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
99. C26B2.6 elpc-4 3600 7.364 0.936 0.957 0.882 0.957 0.921 0.883 0.936 0.892 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
100. Y14H12B.2 Y14H12B.2 6496 7.364 0.946 0.974 0.937 0.974 0.864 0.887 0.937 0.845

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA