C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R12E2.11

Gene ID Gene Name Reads Transcripts Annotation
R12E2.11 R12E2.11 7296 R12E2.11

Genes with expression patterns similar to R12E2.11

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R12E2.11 R12E2.11 7296 2 - 1.000 - 1.000 - - - -
2. K08F11.3 cif-1 10218 1.958 - 0.979 - 0.979 - - - - COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
3. ZK1058.4 ccdc-47 8879 1.956 - 0.978 - 0.978 - - - - CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
4. F56D1.7 daz-1 23684 1.952 - 0.976 - 0.976 - - - - DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
5. C52E4.3 snr-4 19308 1.95 - 0.975 - 0.975 - - - - Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
6. F01F1.8 cct-6 29460 1.95 - 0.975 - 0.975 - - - - T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
7. M106.8 M106.8 5309 1.946 - 0.973 - 0.973 - - - -
8. T08G11.1 T08G11.1 21522 1.944 - 0.972 - 0.972 - - - -
9. H19N07.1 erfa-3 19869 1.944 - 0.972 - 0.972 - - - - Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
10. C41C4.6 ulp-4 13338 1.944 - 0.972 - 0.972 - - - - Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
11. F14E5.2 F14E5.2 6373 1.942 - 0.971 - 0.971 - - - - Golgi apparatus protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19459]
12. F33H1.4 F33H1.4 2447 1.942 - 0.971 - 0.971 - - - -
13. T20B12.1 trd-1 2860 1.942 - 0.971 - 0.971 - - - - Tetratricopeptide repeat-containing protein trd-1 [Source:UniProtKB/Swiss-Prot;Acc:P41842]
14. Y54E10A.10 Y54E10A.10 9302 1.942 - 0.971 - 0.971 - - - - Ribosome production factor 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F0]
15. C50C3.1 C50C3.1 3829 1.94 - 0.970 - 0.970 - - - -
16. F26B1.2 F26B1.2 16220 1.94 - 0.970 - 0.970 - - - -
17. E02D9.1 E02D9.1 10394 1.94 - 0.970 - 0.970 - - - -
18. T08B2.9 fars-1 12650 1.94 - 0.970 - 0.970 - - - - Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
19. Y39A3CL.1 Y39A3CL.1 2105 1.94 - 0.970 - 0.970 - - - -
20. Y47D3A.21 Y47D3A.21 6853 1.94 - 0.970 - 0.970 - - - - Density-regulated protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NAH4]
21. C04G2.6 dis-3 5048 1.938 - 0.969 - 0.969 - - - - Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
22. T28A8.4 T28A8.4 4472 1.938 - 0.969 - 0.969 - - - -
23. F58E10.3 ddx-17 15107 1.938 - 0.969 - 0.969 - - - - DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
24. T28D9.2 rsp-5 6460 1.938 - 0.969 - 0.969 - - - - Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
25. F45H11.3 hpo-35 8299 1.938 - 0.969 - 0.969 - - - -
26. C34E10.5 prmt-5 12277 1.938 - 0.969 - 0.969 - - - - Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
27. T02G5.9 kars-1 9763 1.936 - 0.968 - 0.968 - - - - Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
28. M18.5 ddb-1 3823 1.936 - 0.968 - 0.968 - - - - DNA damage-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21554]
29. W01G7.3 rpb-11 7826 1.936 - 0.968 - 0.968 - - - - Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
30. T21B10.1 mrpl-50 14595 1.936 - 0.968 - 0.968 - - - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
31. T23B3.1 T23B3.1 12084 1.934 - 0.967 - 0.967 - - - -
32. M03C11.3 M03C11.3 9388 1.934 - 0.967 - 0.967 - - - -
33. F08H9.1 coh-3 2202 1.934 - 0.967 - 0.967 - - - - COHesin family [Source:RefSeq peptide;Acc:NP_506583]
34. ZK430.1 toe-1 2458 1.934 - 0.967 - 0.967 - - - - HEAT repeat-containing protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23495]
35. F23B12.7 F23B12.7 9244 1.934 - 0.967 - 0.967 - - - -
36. C07G2.3 cct-5 44703 1.934 - 0.967 - 0.967 - - - - T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
37. H06H21.3 eif-1.A 40990 1.934 - 0.967 - 0.967 - - - - Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
38. ZK637.3 lnkn-1 16095 1.934 - 0.967 - 0.967 - - - - Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
39. Y110A7A.14 pas-3 6831 1.932 - 0.966 - 0.966 - - - - Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
40. T12A2.2 stt-3 18807 1.932 - 0.966 - 0.966 - - - - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3 [Source:UniProtKB/Swiss-Prot;Acc:P46975]
41. ZK20.4 ZK20.4 5647 1.932 - 0.966 - 0.966 - - - - Cytochrome c oxidase assembly factor 7 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23450]
42. K05C4.1 pbs-5 17648 1.932 - 0.966 - 0.966 - - - - Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
43. F28B3.8 imb-1 7515 1.932 - 0.966 - 0.966 - - - - IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
44. F44G4.1 F44G4.1 4086 1.932 - 0.966 - 0.966 - - - - Brix domain-containing protein F44G4.1 [Source:UniProtKB/Swiss-Prot;Acc:P54073]
45. B0511.10 eif-3.E 10041 1.932 - 0.966 - 0.966 - - - - Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
46. C46A5.9 hcf-1 6295 1.932 - 0.966 - 0.966 - - - - human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
47. ZK652.1 snr-5 5993 1.932 - 0.966 - 0.966 - - - - Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
48. T10F2.1 gars-1 7204 1.932 - 0.966 - 0.966 - - - - Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
49. C27B7.2 C27B7.2 2168 1.932 - 0.966 - 0.966 - - - -
50. C08B6.8 C08B6.8 2579 1.932 - 0.966 - 0.966 - - - - Probable oligoribonuclease [Source:UniProtKB/Swiss-Prot;Acc:Q17819]
51. F08D12.1 srpa-72 9890 1.93 - 0.965 - 0.965 - - - - Signal recognition particle subunit SRP72 [Source:UniProtKB/Swiss-Prot;Acc:P91240]
52. C33H5.12 rsp-6 23342 1.93 - 0.965 - 0.965 - - - - Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
53. Y116A8A.9 map-2 5122 1.93 - 0.965 - 0.965 - - - - Methionine aminopeptidase 2 [Source:RefSeq peptide;Acc:NP_001255907]
54. B0035.12 sart-3 7188 1.93 - 0.965 - 0.965 - - - - human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
55. C28H8.3 C28H8.3 16960 1.93 - 0.965 - 0.965 - - - - Uncharacterized helicase C28H8.3 [Source:UniProtKB/Swiss-Prot;Acc:Q09475]
56. Y23H5A.3 Y23H5A.3 4195 1.93 - 0.965 - 0.965 - - - -
57. F44E2.8 F44E2.8 12814 1.93 - 0.965 - 0.965 - - - -
58. T13F2.2 T13F2.2 4196 1.93 - 0.965 - 0.965 - - - - Putative RNA polymerase II transcriptional coactivator [Source:UniProtKB/Swiss-Prot;Acc:Q94045]
59. C08C3.4 cyk-7 12075 1.93 - 0.965 - 0.965 - - - - Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
60. C18A3.3 C18A3.3 9387 1.93 - 0.965 - 0.965 - - - - Probable rRNA-processing protein EBP2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09958]
61. Y73B6BL.6 sqd-1 41708 1.93 - 0.965 - 0.965 - - - - homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
62. C46C2.1 wnk-1 15184 1.93 - 0.965 - 0.965 - - - - Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
63. Y59E9AL.4 Y59E9AL.4 4025 1.93 - 0.965 - 0.965 - - - -
64. T01E8.6 mrps-14 9328 1.928 - 0.964 - 0.964 - - - - Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
65. ZK1127.4 ZK1127.4 3088 1.928 - 0.964 - 0.964 - - - - Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
66. ZK637.2 ZK637.2 13153 1.928 - 0.964 - 0.964 - - - -
67. F13G3.4 dylt-1 21345 1.928 - 0.964 - 0.964 - - - - DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
68. C23G10.8 C23G10.8 4642 1.928 - 0.964 - 0.964 - - - -
69. R144.7 larp-1 24669 1.928 - 0.964 - 0.964 - - - - La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
70. Y38E10A.6 ceh-100 5505 1.928 - 0.964 - 0.964 - - - - C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
71. C40H1.1 cpb-1 7617 1.928 - 0.964 - 0.964 - - - - Cytoplasmic polyadenylation element-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03571]
72. F14B4.3 rpoa-2 7549 1.928 - 0.964 - 0.964 - - - - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
73. E01A2.2 E01A2.2 12356 1.928 - 0.964 - 0.964 - - - - Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
74. C01F6.9 C01F6.9 14696 1.928 - 0.964 - 0.964 - - - - Nx; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDA6]
75. Y39E4B.2 snpc-1.2 5800 1.928 - 0.964 - 0.964 - - - - SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
76. T04A8.15 him-18 1428 1.926 - 0.963 - 0.963 - - - - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_497968]
77. T01G9.6 kin-10 27360 1.926 - 0.963 - 0.963 - - - - Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
78. T24G10.2 T24G10.2 7910 1.926 - 0.963 - 0.963 - - - -
79. T27F7.3 eif-1 28176 1.926 - 0.963 - 0.963 - - - - Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
80. B0464.1 dars-1 12331 1.926 - 0.963 - 0.963 - - - - Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
81. C18D11.4 rsp-8 18308 1.926 - 0.963 - 0.963 - - - - SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
82. C25A1.4 C25A1.4 15507 1.926 - 0.963 - 0.963 - - - -
83. W08E3.3 ola-1 20885 1.926 - 0.963 - 0.963 - - - - Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
84. C30A5.3 C30A5.3 16475 1.926 - 0.963 - 0.963 - - - -
85. ZK616.6 perm-3 16186 1.926 - 0.963 - 0.963 - - - - PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
86. K07F5.14 K07F5.14 4570 1.926 - 0.963 - 0.963 - - - -
87. R10D12.13 R10D12.13 35596 1.926 - 0.963 - 0.963 - - - -
88. Y54G2A.31 ubc-13 22367 1.926 - 0.963 - 0.963 - - - - Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
89. F58D5.1 hrp-2 17211 1.926 - 0.963 - 0.963 - - - - human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
90. W04B5.4 mrpl-30 4938 1.926 - 0.963 - 0.963 - - - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497550]
91. Y37E3.9 phb-1 29211 1.926 - 0.963 - 0.963 - - - - Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
92. B0205.7 kin-3 29775 1.924 - 0.962 - 0.962 - - - - Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
93. C34B2.7 sdha-2 3043 1.924 - 0.962 - 0.962 - - - - Succinate dehydrogenase [Source:RefSeq peptide;Acc:NP_492798]
94. Y23H5B.6 Y23H5B.6 5886 1.924 - 0.962 - 0.962 - - - -
95. Y73B6BL.5 seu-1 8719 1.924 - 0.962 - 0.962 - - - - Suppressor of Ectopic Unc-5 [Source:RefSeq peptide;Acc:NP_001293775]
96. T06A10.1 mel-46 4407 1.924 - 0.962 - 0.962 - - - - MEL-46; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED26]
97. F54A3.3 cct-3 25183 1.924 - 0.962 - 0.962 - - - - T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
98. Y41D4B.11 Y41D4B.11 7043 1.924 - 0.962 - 0.962 - - - -
99. ZK265.6 ZK265.6 3565 1.924 - 0.962 - 0.962 - - - - Nucleolar protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q94402]
100. Y50D7A.9 taco-1 5949 1.924 - 0.962 - 0.962 - - - - Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]

There are 330 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA