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Results for C55B7.9

Gene ID Gene Name Reads Transcripts Annotation
C55B7.9 mdt-18 2592 C55B7.9.1, C55B7.9.2 Mediator of RNA polymerase II transcription subunit 18 [Source:UniProtKB/Swiss-Prot;Acc:Q966M5]

Genes with expression patterns similar to C55B7.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C55B7.9 mdt-18 2592 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mediator of RNA polymerase II transcription subunit 18 [Source:UniProtKB/Swiss-Prot;Acc:Q966M5]
2. C55A6.2 ttll-5 5158 7.341 0.892 0.957 0.950 0.957 0.944 0.953 0.822 0.866 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
3. ZK863.6 dpy-30 16177 7.34 0.893 0.958 0.916 0.958 0.955 0.948 0.935 0.777 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
4. T24F1.1 raga-1 16171 7.321 0.893 0.936 0.936 0.936 0.935 0.950 0.884 0.851 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
5. T05C12.7 cct-1 41264 7.321 0.849 0.946 0.948 0.946 0.945 0.963 0.871 0.853 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
6. F01F1.8 cct-6 29460 7.315 0.880 0.952 0.953 0.952 0.947 0.901 0.910 0.820 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
7. ZK637.3 lnkn-1 16095 7.314 0.897 0.962 0.918 0.962 0.945 0.953 0.868 0.809 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
8. F43G6.9 patr-1 23000 7.305 0.913 0.960 0.917 0.960 0.946 0.957 0.861 0.791 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
9. K07D4.3 rpn-11 8834 7.298 0.880 0.942 0.945 0.942 0.974 0.913 0.915 0.787 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
10. F38A5.1 odr-8 5283 7.294 0.899 0.953 0.945 0.953 0.929 0.932 0.854 0.829 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
11. C53A5.3 hda-1 18413 7.267 0.872 0.956 0.912 0.956 0.928 0.955 0.891 0.797 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
12. T21B10.1 mrpl-50 14595 7.265 0.897 0.939 0.940 0.939 0.952 0.916 0.865 0.817 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
13. T19C3.8 fem-2 9225 7.259 0.879 0.963 0.932 0.963 0.957 0.897 0.890 0.778 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
14. T26E3.3 par-6 8650 7.259 0.874 0.946 0.920 0.946 0.959 0.917 0.910 0.787 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
15. T26A5.9 dlc-1 59038 7.255 0.868 0.934 0.934 0.934 0.903 0.955 0.888 0.839 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
16. C17G10.4 cdc-14 6262 7.254 0.911 0.956 0.940 0.956 0.923 0.915 0.831 0.822 Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
17. F08F8.3 kap-1 31437 7.245 0.874 0.955 0.923 0.955 0.907 0.963 0.862 0.806 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
18. F55A12.3 ppk-1 8598 7.24 0.876 0.958 0.960 0.958 0.937 0.887 0.799 0.865 PIP Kinase [Source:RefSeq peptide;Acc:NP_491576]
19. T10B5.5 cct-7 24616 7.239 0.841 0.929 0.955 0.929 0.933 0.954 0.901 0.797 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
20. F53E4.1 F53E4.1 7979 7.237 0.868 0.952 0.904 0.952 0.930 0.930 0.861 0.840
21. C17H12.13 anat-1 12995 7.236 0.902 0.959 0.937 0.959 0.939 0.862 0.891 0.787 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
22. C07G2.3 cct-5 44703 7.234 0.828 0.932 0.910 0.932 0.958 0.950 0.897 0.827 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
23. F26H11.2 nurf-1 13015 7.233 0.888 0.943 0.946 0.943 0.896 0.951 0.817 0.849 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
24. R06A4.4 imb-2 10302 7.219 0.851 0.958 0.938 0.958 0.949 0.900 0.902 0.763 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
25. K07C5.1 arx-2 20142 7.219 0.877 0.954 0.908 0.954 0.956 0.923 0.873 0.774 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
26. Y49A3A.1 cept-2 8916 7.219 0.831 0.929 0.921 0.929 0.952 0.943 0.823 0.891 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
27. T08B2.9 fars-1 12650 7.216 0.853 0.968 0.929 0.968 0.936 0.917 0.860 0.785 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
28. F18C12.2 rme-8 5128 7.216 0.875 0.958 0.946 0.958 0.886 0.903 0.835 0.855 Receptor Mediated Endocytosis [Source:RefSeq peptide;Acc:NP_492222]
29. C43E11.10 cdc-6 5331 7.214 0.883 0.967 0.920 0.967 0.910 0.887 0.888 0.792 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
30. F28H1.3 aars-2 13537 7.212 0.896 0.945 0.952 0.945 0.921 0.935 0.873 0.745 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
31. ZK742.1 xpo-1 20741 7.21 0.894 0.946 0.952 0.946 0.943 0.922 0.865 0.742 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
32. R07E5.14 rnp-4 11659 7.209 0.884 0.956 0.945 0.956 0.939 0.924 0.913 0.692 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
33. ZK1128.8 vps-29 5118 7.209 0.873 0.954 0.921 0.954 0.909 0.946 0.834 0.818 Vacuolar protein sorting-associated protein 29 [Source:RefSeq peptide;Acc:NP_001022987]
34. K07A1.12 lin-53 15817 7.207 0.879 0.970 0.919 0.970 0.939 0.905 0.895 0.730 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
35. C08F8.1 pfd-1 10199 7.203 0.830 0.944 0.905 0.944 0.952 0.953 0.857 0.818 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
36. R151.9 pfd-5 6951 7.202 0.860 0.920 0.926 0.920 0.931 0.950 0.886 0.809 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
37. H21P03.1 mbf-1 25586 7.2 0.802 0.955 0.912 0.955 0.927 0.952 0.895 0.802 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
38. C07G2.2 atf-7 17768 7.199 0.889 0.939 0.952 0.939 0.944 0.934 0.706 0.896 ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_497914]
39. F33D4.7 emc-6 6534 7.197 0.834 0.956 0.943 0.956 0.906 0.921 0.880 0.801 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
40. C36A4.5 maph-1.3 15493 7.191 0.911 0.957 0.928 0.957 0.945 0.882 0.905 0.706 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
41. R07B7.3 pqn-53 10459 7.191 0.825 0.959 0.942 0.959 0.941 0.946 0.850 0.769 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
42. ZK792.6 let-60 16967 7.189 0.903 0.946 0.954 0.946 0.897 0.891 0.782 0.870 Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
43. Y79H2A.6 arx-3 17398 7.188 0.878 0.951 0.935 0.951 0.901 0.935 0.816 0.821 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
44. F58E10.3 ddx-17 15107 7.179 0.916 0.952 0.940 0.952 0.904 0.913 0.865 0.737 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
45. Y54G2A.31 ubc-13 22367 7.175 0.832 0.940 0.966 0.940 0.935 0.949 0.848 0.765 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
46. F53G2.7 mnat-1 10966 7.175 0.788 0.924 0.918 0.924 0.952 0.940 0.874 0.855 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
47. F54A3.3 cct-3 25183 7.173 0.810 0.929 0.924 0.929 0.934 0.955 0.894 0.798 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
48. F09G2.9 attf-2 14771 7.171 0.870 0.960 0.933 0.960 0.955 0.879 0.881 0.733 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
49. T21B10.7 cct-2 13999 7.171 0.869 0.914 0.936 0.914 0.962 0.906 0.857 0.813 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
50. Y41D4B.13 ced-2 10100 7.17 0.872 0.954 0.935 0.954 0.936 0.905 0.909 0.705 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
51. Y6D11A.2 arx-4 3777 7.168 0.849 0.954 0.895 0.954 0.949 0.884 0.827 0.856 Probable actin-related protein 2/3 complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8WTM6]
52. K08E7.1 eak-7 18960 7.167 0.900 0.928 0.915 0.928 0.927 0.950 0.877 0.742 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
53. Y71G12B.12 atg-5 5575 7.166 0.804 0.964 0.939 0.964 0.895 0.965 0.828 0.807 Autophagy protein 5 [Source:RefSeq peptide;Acc:NP_001293440]
54. F21C3.4 rde-2 6286 7.161 0.847 0.952 0.942 0.952 0.930 0.879 0.883 0.776
55. R07E5.10 pdcd-2 5211 7.155 0.849 0.943 0.958 0.943 0.941 0.906 0.821 0.794 Vacuolar ATPase assembly integral membrane protein VMA21 homolog [Source:UniProtKB/Swiss-Prot;Acc:A5JYQ9]
56. Y54E5B.4 ubc-16 8386 7.153 0.863 0.945 0.893 0.945 0.959 0.906 0.850 0.792 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
57. ZK1058.4 ccdc-47 8879 7.149 0.881 0.963 0.922 0.963 0.929 0.934 0.812 0.745 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
58. ZK1290.4 nfi-1 5353 7.148 0.877 0.952 0.942 0.952 0.953 0.899 0.787 0.786 NFI (Nuclear Factor I) family [Source:RefSeq peptide;Acc:NP_001022505]
59. R06C1.2 fdps-1 4504 7.146 0.884 0.961 0.908 0.961 0.917 0.890 0.901 0.724 Farnesyl DiPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_493027]
60. Y71F9B.4 snr-7 13542 7.146 0.852 0.954 0.947 0.954 0.943 0.909 0.905 0.682 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
61. Y24F12A.2 ragc-1 3950 7.144 0.846 0.965 0.916 0.965 0.942 0.912 0.759 0.839 RAs-related GTP binding protein C homolog [Source:RefSeq peptide;Acc:NP_001293887]
62. F59E12.11 sam-4 8179 7.144 0.829 0.947 0.949 0.947 0.956 0.918 0.843 0.755
63. D2096.2 praf-3 18471 7.143 0.865 0.955 0.931 0.955 0.903 0.922 0.784 0.828 Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
64. C48G7.3 rin-1 9029 7.142 0.888 0.952 0.931 0.952 0.938 0.921 0.788 0.772 RIN (Ras/Rab INteractor) homolog [Source:RefSeq peptide;Acc:NP_001263893]
65. T10B11.3 ztf-4 5161 7.141 0.896 0.968 0.940 0.968 0.909 0.905 0.806 0.749 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
66. B0205.11 mrpl-9 9162 7.141 0.837 0.956 0.937 0.956 0.940 0.912 0.888 0.715 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
67. C52E4.3 snr-4 19308 7.141 0.840 0.957 0.912 0.957 0.939 0.955 0.826 0.755 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
68. T12E12.3 T12E12.3 3844 7.139 0.898 0.920 0.913 0.920 0.951 0.929 0.824 0.784
69. K11D12.2 pqn-51 15951 7.137 0.884 0.959 0.933 0.959 0.929 0.917 0.850 0.706 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
70. M01E5.4 M01E5.4 7638 7.134 0.904 0.925 0.932 0.925 0.915 0.961 0.844 0.728
71. F13G3.4 dylt-1 21345 7.128 0.892 0.957 0.918 0.957 0.925 0.929 0.827 0.723 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
72. ZK1251.9 dcaf-1 10926 7.126 0.865 0.953 0.932 0.953 0.940 0.923 0.861 0.699 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
73. F43G9.5 cfim-1 9169 7.125 0.864 0.950 0.929 0.950 0.947 0.881 0.901 0.703 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
74. Y57G11C.13 arl-8 26649 7.125 0.862 0.955 0.925 0.955 0.925 0.853 0.802 0.848 ARF-Like [Source:RefSeq peptide;Acc:NP_502791]
75. C27B7.8 rap-1 11965 7.123 0.840 0.955 0.944 0.955 0.945 0.881 0.769 0.834 Ras-related protein Rap-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18246]
76. Y73B6BL.32 lsm-8 11002 7.121 0.861 0.949 0.926 0.949 0.954 0.907 0.866 0.709 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
77. K08F4.2 gtbp-1 25222 7.118 0.851 0.940 0.934 0.940 0.952 0.884 0.901 0.716 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
78. F58G11.6 ccz-1 5655 7.118 0.905 0.955 0.938 0.955 0.941 0.831 0.876 0.717
79. B0041.2 ain-2 13092 7.116 0.887 0.954 0.951 0.954 0.901 0.906 0.744 0.819 ALG-1 INteracting protein [Source:RefSeq peptide;Acc:NP_001249682]
80. F36H1.2 kdin-1 6118 7.116 0.854 0.919 0.926 0.919 0.909 0.953 0.771 0.865 KiDINs220 (vertebrate scaffold protein) homolog [Source:RefSeq peptide;Acc:NP_001040942]
81. F26F4.7 nhl-2 13541 7.114 0.880 0.952 0.941 0.952 0.934 0.901 0.812 0.742 NHL (ring finger b-box coiled coil) domain containing [Source:RefSeq peptide;Acc:NP_498026]
82. F18A1.2 lin-26 8503 7.113 0.895 0.957 0.935 0.957 0.912 0.872 0.910 0.675 Transcription factor lin-26 [Source:UniProtKB/Swiss-Prot;Acc:Q27355]
83. R07G3.1 cdc-42 35737 7.109 0.908 0.966 0.945 0.966 0.850 0.898 0.691 0.885 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
84. F22D3.1 ceh-38 8237 7.107 0.875 0.941 0.912 0.941 0.923 0.962 0.886 0.667 Homeobox protein ceh-38 [Source:UniProtKB/Swiss-Prot;Acc:Q19720]
85. ZK930.1 vps-15 2445 7.104 0.898 0.926 0.913 0.926 0.955 0.921 0.865 0.700 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_001254323]
86. Y53C10A.12 hsf-1 7899 7.104 0.850 0.960 0.898 0.960 0.904 0.901 0.914 0.717 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
87. ZK616.6 perm-3 16186 7.096 0.877 0.964 0.937 0.964 0.887 0.902 0.827 0.738 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
88. T18H9.7 tag-232 8234 7.095 0.886 0.953 0.917 0.953 0.946 0.863 0.791 0.786
89. T23H2.1 npp-12 12425 7.094 0.895 0.943 0.952 0.943 0.898 0.894 0.850 0.719 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
90. C16A11.3 C16A11.3 3250 7.093 0.845 0.929 0.915 0.929 0.959 0.916 0.900 0.700
91. Y54G11A.11 Y54G11A.11 14933 7.091 0.932 0.951 0.939 0.951 0.840 0.882 0.806 0.790 Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]
92. C06H2.6 lmtr-3 11122 7.091 0.878 0.943 0.919 0.943 0.870 0.961 0.798 0.779 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
93. T12D8.1 set-16 5542 7.09 0.892 0.871 0.927 0.871 0.921 0.951 0.802 0.855 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_499819]
94. F47D12.4 hmg-1.2 13779 7.09 0.866 0.960 0.918 0.960 0.899 0.921 0.722 0.844 High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
95. F45E12.2 brf-1 4667 7.09 0.874 0.952 0.910 0.952 0.917 0.885 0.863 0.737 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
96. ZK484.4 ZK484.4 6097 7.09 0.861 0.954 0.928 0.954 0.888 0.816 0.876 0.813
97. ZK1010.3 frg-1 3533 7.087 0.892 0.956 0.926 0.956 0.923 0.876 0.840 0.718 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
98. T20D3.5 T20D3.5 3036 7.08 0.829 0.895 0.900 0.895 0.970 0.939 0.883 0.769
99. R12B2.5 mdt-15 19784 7.076 0.840 0.956 0.928 0.956 0.884 0.958 0.752 0.802 Mediator of RNA polymerase II transcription subunit 15 [Source:UniProtKB/Swiss-Prot;Acc:Q21955]
100. Y47D3A.16 rsks-1 16858 7.076 0.867 0.951 0.941 0.951 0.902 0.940 0.749 0.775 Ribosomal protein S6 kinase [Source:RefSeq peptide;Acc:NP_499447]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA