C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C04D8.1

Gene ID Gene Name Reads Transcripts Annotation
C04D8.1 pac-1 11331 C04D8.1a, C04D8.1b, C04D8.1c, C04D8.1d, C04D8.1e, C04D8.1f, C04D8.1g GTPase-activating protein pac-1 [Source:UniProtKB/Swiss-Prot;Acc:P34288]

Genes with expression patterns similar to C04D8.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C04D8.1 pac-1 11331 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GTPase-activating protein pac-1 [Source:UniProtKB/Swiss-Prot;Acc:P34288]
2. R10E11.1 cbp-1 20447 7.422 0.913 0.983 0.973 0.983 0.946 0.911 0.822 0.891
3. F57F5.5 pkc-1 13592 7.419 0.947 0.956 0.984 0.956 0.916 0.917 0.853 0.890 Protein kinase C-like 1B [Source:UniProtKB/Swiss-Prot;Acc:P34885]
4. F27D4.2 lsy-22 6520 7.406 0.929 0.971 0.972 0.971 0.942 0.911 0.835 0.875
5. R05F9.1 btbd-10 10716 7.364 0.953 0.980 0.977 0.980 0.957 0.897 0.715 0.905 BTB/POZ Domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_740982]
6. C33H5.17 zgpa-1 7873 7.363 0.919 0.980 0.974 0.980 0.951 0.921 0.767 0.871 Zinc finger G-PAtch domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_501296]
7. Y59A8B.1 dpy-21 8126 7.355 0.910 0.972 0.971 0.972 0.898 0.913 0.805 0.914 DumPY: shorter than wild-type [Source:RefSeq peptide;Acc:NP_001024266]
8. T04D1.3 unc-57 12126 7.354 0.960 0.987 0.978 0.987 0.959 0.896 0.757 0.830 Endophilin [Source:UniProtKB/TrEMBL;Acc:Q6TM46]
9. F57B9.2 let-711 8592 7.344 0.932 0.974 0.946 0.974 0.916 0.884 0.824 0.894 NTL-1a; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q20937]
10. F43C1.2 mpk-1 13166 7.341 0.936 0.972 0.960 0.972 0.908 0.891 0.793 0.909 Mitogen-activated protein kinase mpk-1 [Source:UniProtKB/Swiss-Prot;Acc:P39745]
11. C01G6.5 C01G6.5 10996 7.329 0.925 0.983 0.970 0.983 0.918 0.897 0.782 0.871
12. Y111B2A.11 epc-1 8915 7.318 0.964 0.961 0.951 0.961 0.956 0.909 0.773 0.843 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]
13. C10C6.1 kin-4 13566 7.313 0.959 0.985 0.983 0.985 0.914 0.881 0.758 0.848 KIN-4 protein; Protein KINase [Source:UniProtKB/TrEMBL;Acc:G5EFA4]
14. F54F2.8 prx-19 15821 7.312 0.912 0.964 0.954 0.964 0.965 0.942 0.716 0.895 Putative peroxisomal biogenesis factor 19 [Source:UniProtKB/Swiss-Prot;Acc:P34453]
15. B0041.2 ain-2 13092 7.304 0.929 0.975 0.981 0.975 0.928 0.843 0.770 0.903 ALG-1 INteracting protein [Source:RefSeq peptide;Acc:NP_001249682]
16. C04A2.3 egl-27 15782 7.298 0.923 0.962 0.967 0.962 0.954 0.848 0.826 0.856 Egg-laying defective protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q09228]
17. C01G10.11 unc-76 13558 7.297 0.948 0.971 0.983 0.971 0.949 0.922 0.751 0.802 UNC-76 [Source:UniProtKB/TrEMBL;Acc:Q7JNU9]
18. F25D1.1 ppm-1 16992 7.294 0.954 0.984 0.976 0.984 0.947 0.877 0.685 0.887 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
19. C46C2.1 wnk-1 15184 7.281 0.926 0.972 0.978 0.972 0.940 0.878 0.741 0.874 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
20. Y57A10A.18 pqn-87 31844 7.273 0.929 0.976 0.959 0.976 0.932 0.925 0.732 0.844 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
21. F26G5.9 tam-1 11602 7.269 0.927 0.960 0.971 0.960 0.907 0.869 0.803 0.872 Tandem Array expression Modifier [Source:RefSeq peptide;Acc:NP_504335]
22. Y46G5A.17 cpt-1 14412 7.258 0.941 0.974 0.954 0.974 0.924 0.913 0.683 0.895 Carnitine Palmitoyl Transferase [Source:RefSeq peptide;Acc:NP_496721]
23. K10C3.2 ensa-1 19836 7.255 0.924 0.981 0.989 0.981 0.936 0.902 0.727 0.815 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
24. T04H1.5 T04H1.5 1060 7.253 0.958 0.919 0.982 0.919 0.948 0.893 0.735 0.899
25. R12B2.5 mdt-15 19784 7.251 0.915 0.960 0.946 0.960 0.879 0.841 0.838 0.912 Mediator of RNA polymerase II transcription subunit 15 [Source:UniProtKB/Swiss-Prot;Acc:Q21955]
26. F43E2.7 mtch-1 30689 7.25 0.889 0.959 0.947 0.959 0.922 0.923 0.797 0.854 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
27. H39E23.1 par-1 9972 7.249 0.941 0.943 0.954 0.943 0.926 0.908 0.765 0.869 Serine/threonine-protein kinase par-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TW45]
28. C52E12.4 lst-6 5520 7.239 0.939 0.978 0.975 0.978 0.842 0.851 0.754 0.922 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_495437]
29. ZK792.6 let-60 16967 7.235 0.922 0.973 0.968 0.973 0.905 0.869 0.757 0.868 Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
30. C32E8.3 tppp-1 10716 7.23 0.896 0.961 0.947 0.961 0.936 0.886 0.782 0.861 Tubulin polymerization-promoting protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P91127]
31. T23H2.5 rab-10 31382 7.23 0.939 0.963 0.974 0.963 0.920 0.879 0.765 0.827 RAB family [Source:RefSeq peptide;Acc:NP_491857]
32. F40F9.7 drap-1 10298 7.228 0.950 0.969 0.961 0.969 0.924 0.925 0.771 0.759 DRAP1 corepressor homolog [Source:RefSeq peptide;Acc:NP_001023907]
33. C06C3.1 mel-11 10375 7.227 0.931 0.970 0.920 0.970 0.951 0.901 0.702 0.882 MEL-11; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEB3]
34. F47D12.4 hmg-1.2 13779 7.225 0.930 0.977 0.965 0.977 0.876 0.832 0.749 0.919 High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
35. F36D4.3 hum-2 16493 7.224 0.968 0.971 0.978 0.971 0.935 0.877 0.708 0.816 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
36. W02B9.1 hmr-1 13240 7.223 0.900 0.972 0.959 0.972 0.918 0.876 0.765 0.861 Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]
37. H21P03.3 sms-1 7737 7.219 0.942 0.970 0.970 0.970 0.891 0.836 0.785 0.855 Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3D4]
38. Y92H12A.1 src-1 6186 7.218 0.941 0.948 0.973 0.948 0.944 0.860 0.748 0.856 Tyrosine protein-kinase src-1 [Source:UniProtKB/Swiss-Prot;Acc:G5EE56]
39. F56D1.4 clr-1 8615 7.217 0.927 0.970 0.963 0.970 0.941 0.858 0.733 0.855 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
40. F55C5.7 rskd-1 4814 7.216 0.946 0.968 0.969 0.968 0.859 0.869 0.721 0.916 Ribosomal protein S6 Kinase Delta homolog [Source:RefSeq peptide;Acc:NP_506082]
41. F40F12.5 cyld-1 10757 7.215 0.959 0.971 0.968 0.971 0.923 0.901 0.700 0.822 CYLinDromatosis (human disease gene) homolog [Source:RefSeq peptide;Acc:NP_001255045]
42. T27C4.4 lin-40 16565 7.209 0.933 0.976 0.974 0.976 0.953 0.893 0.660 0.844
43. T24C4.6 zer-1 16051 7.208 0.922 0.972 0.978 0.972 0.935 0.889 0.686 0.854 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
44. C07G1.3 pct-1 10635 7.207 0.960 0.972 0.984 0.972 0.912 0.853 0.687 0.867 Cyclin-dependent kinase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8I7M8]
45. F46F3.4 ape-1 8747 7.206 0.954 0.959 0.949 0.959 0.930 0.873 0.753 0.829 Apoptotic enhancer 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9XVN3]
46. R07G3.1 cdc-42 35737 7.206 0.937 0.977 0.972 0.977 0.923 0.833 0.708 0.879 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
47. ZK675.1 ptc-1 18468 7.201 0.932 0.924 0.964 0.924 0.950 0.912 0.759 0.836 Protein patched homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09614]
48. Y71G12B.15 ubc-3 9409 7.201 0.921 0.957 0.964 0.957 0.924 0.917 0.677 0.884 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001293441]
49. Y56A3A.20 ccf-1 18463 7.198 0.928 0.985 0.964 0.985 0.938 0.882 0.713 0.803 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
50. R08D7.6 pde-2 9491 7.196 0.942 0.967 0.983 0.967 0.889 0.874 0.675 0.899 Probable 3',5'-cyclic phosphodiesterase pde-2 [Source:UniProtKB/Swiss-Prot;Acc:P30645]
51. F26E4.1 sur-6 16191 7.194 0.940 0.981 0.964 0.981 0.933 0.893 0.695 0.807 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
52. B0286.4 ntl-2 14207 7.191 0.938 0.970 0.974 0.970 0.927 0.881 0.752 0.779 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
53. Y41C4A.4 crh-1 18112 7.188 0.914 0.943 0.977 0.943 0.856 0.896 0.778 0.881 CREB Homolog [Source:RefSeq peptide;Acc:NP_001022861]
54. C35B1.1 ubc-1 13805 7.187 0.871 0.937 0.955 0.937 0.940 0.910 0.747 0.890 Ubiquitin-conjugating enzyme E2 1 [Source:UniProtKB/Swiss-Prot;Acc:P52478]
55. F08F8.3 kap-1 31437 7.186 0.921 0.971 0.947 0.971 0.924 0.881 0.717 0.854 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
56. ZC518.3 ccr-4 15531 7.185 0.930 0.966 0.976 0.966 0.928 0.914 0.702 0.803 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
57. C09G12.9 tsg-101 9451 7.18 0.917 0.958 0.982 0.958 0.934 0.879 0.717 0.835 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
58. F40F11.2 mig-38 5836 7.18 0.960 0.977 0.965 0.977 0.865 0.864 0.768 0.804
59. F38H4.9 let-92 25368 7.177 0.926 0.977 0.953 0.977 0.931 0.890 0.696 0.827 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
60. T24A11.1 mtm-3 18086 7.176 0.931 0.971 0.982 0.971 0.917 0.873 0.688 0.843 Myotubularin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q22712]
61. F44B9.3 cit-1.2 5762 7.171 0.904 0.969 0.977 0.969 0.887 0.871 0.803 0.791 Cyclin-T1.2 [Source:UniProtKB/Swiss-Prot;Acc:P34424]
62. W02A11.2 vps-25 4015 7.17 0.924 0.955 0.935 0.955 0.916 0.864 0.802 0.819 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_493230]
63. D1014.3 snap-1 16776 7.168 0.949 0.975 0.983 0.975 0.929 0.856 0.668 0.833 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
64. ZK593.4 rbr-2 10600 7.165 0.940 0.963 0.951 0.963 0.842 0.862 0.739 0.905 Lysine-specific demethylase rbr-2 [Source:UniProtKB/Swiss-Prot;Acc:Q23541]
65. C26C6.5 dcp-66 9828 7.161 0.918 0.948 0.967 0.948 0.906 0.917 0.712 0.845 Deacetylase Complex Protein [Source:RefSeq peptide;Acc:NP_492111]
66. C04G6.3 pld-1 6341 7.16 0.964 0.930 0.938 0.930 0.963 0.893 0.625 0.917 PhosphoLipase D [Source:RefSeq peptide;Acc:NP_494939]
67. K07G5.1 crml-1 7787 7.159 0.944 0.975 0.970 0.975 0.917 0.865 0.626 0.887 CARMIL (Capping, ARp2/3, Myosin I Linker protein) homolog [Source:RefSeq peptide;Acc:NP_492024]
68. R07B5.9 lsy-12 8400 7.159 0.948 0.984 0.984 0.984 0.902 0.877 0.735 0.745 Histone acetyltransferase [Source:RefSeq peptide;Acc:NP_001256148]
69. T05H10.5 ufd-2 30044 7.156 0.887 0.938 0.930 0.938 0.951 0.918 0.762 0.832 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
70. F26H11.2 nurf-1 13015 7.156 0.950 0.974 0.955 0.974 0.885 0.868 0.697 0.853 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
71. K04G7.3 ogt-1 8245 7.155 0.915 0.980 0.971 0.980 0.889 0.825 0.733 0.862 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Source:UniProtKB/Swiss-Prot;Acc:O18158]
72. D1022.1 ubc-6 9722 7.154 0.939 0.985 0.968 0.985 0.898 0.841 0.703 0.835 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
73. T13F2.3 pis-1 4560 7.15 0.951 0.964 0.977 0.964 0.923 0.859 0.678 0.834 PIS (Pax-2, IA-1/6, Smad-2 interacting protein) homolog [Source:RefSeq peptide;Acc:NP_501749]
74. C43E11.3 met-1 7581 7.15 0.945 0.961 0.968 0.961 0.911 0.887 0.686 0.831 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]
75. C49H3.5 ntl-4 5258 7.149 0.927 0.956 0.962 0.956 0.932 0.886 0.756 0.774 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001294150]
76. C06H2.6 lmtr-3 11122 7.147 0.937 0.979 0.985 0.979 0.888 0.856 0.690 0.833 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
77. T26A5.9 dlc-1 59038 7.145 0.888 0.957 0.968 0.957 0.924 0.859 0.726 0.866 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
78. C07A9.3 tlk-1 12572 7.145 0.944 0.961 0.973 0.961 0.908 0.904 0.733 0.761 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
79. K02A11.1 gfi-2 8382 7.142 0.935 0.959 0.973 0.959 0.813 0.794 0.804 0.905 GEI-4 (Four) Interacting protein [Source:RefSeq peptide;Acc:NP_492587]
80. Y119C1B.8 bet-1 5991 7.141 0.934 0.947 0.967 0.947 0.930 0.877 0.667 0.872 Bromodomain-containing protein bet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y80]
81. B0379.4 scpl-1 14783 7.14 0.879 0.977 0.967 0.977 0.884 0.861 0.734 0.861 SCP (Small C-terminal domain Phosphatase)-Like phosphatase [Source:RefSeq peptide;Acc:NP_740911]
82. K10B2.1 lin-23 15896 7.138 0.961 0.978 0.983 0.978 0.925 0.865 0.655 0.793 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
83. T07A5.6 unc-69 6910 7.138 0.953 0.948 0.971 0.948 0.943 0.897 0.680 0.798 Short coiled-coil domain-containing protein UNC-69 splice variant T07A5.6b; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDQ5]
84. R74.5 asd-1 6481 7.138 0.950 0.968 0.979 0.968 0.864 0.862 0.716 0.831 RNA-binding protein ASD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEW7]
85. W07B3.2 gei-4 15206 7.134 0.936 0.968 0.976 0.968 0.861 0.811 0.748 0.866 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_497188]
86. F33D11.11 vpr-1 18001 7.133 0.908 0.963 0.942 0.963 0.939 0.887 0.697 0.834 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
87. R53.7 aakg-5 8491 7.131 0.927 0.972 0.973 0.972 0.958 0.859 0.682 0.788 AMP-Activated protein Kinase Gamma subunit [Source:RefSeq peptide;Acc:NP_871971]
88. F56C9.11 F56C9.11 4388 7.13 0.955 0.973 0.972 0.973 0.864 0.834 0.630 0.929
89. Y79H2A.6 arx-3 17398 7.127 0.932 0.965 0.967 0.965 0.895 0.859 0.670 0.874 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
90. F17C11.8 vps-36 3882 7.127 0.857 0.931 0.954 0.931 0.955 0.908 0.746 0.845 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505798]
91. Y49A3A.1 cept-2 8916 7.126 0.918 0.959 0.977 0.959 0.851 0.870 0.739 0.853 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
92. C56C10.13 dnj-8 5329 7.123 0.933 0.974 0.968 0.974 0.928 0.867 0.659 0.820 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001040753]
93. C25H3.6 mdt-26 9423 7.122 0.930 0.960 0.966 0.960 0.935 0.838 0.727 0.806 MeDiaTor [Source:RefSeq peptide;Acc:NP_495108]
94. F26E4.11 hrdl-1 14721 7.122 0.929 0.972 0.969 0.972 0.915 0.872 0.671 0.822 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
95. ZK637.3 lnkn-1 16095 7.12 0.936 0.959 0.937 0.959 0.885 0.890 0.695 0.859 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
96. Y106G6E.6 csnk-1 11517 7.119 0.931 0.964 0.958 0.964 0.933 0.891 0.702 0.776 Casein kinase I gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8WQ99]
97. C39E9.14 dli-1 5650 7.118 0.937 0.963 0.955 0.963 0.921 0.882 0.694 0.803 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
98. F08F8.2 hmgr-1 6483 7.113 0.893 0.967 0.947 0.967 0.940 0.845 0.634 0.920 3-hydroxy-3-methylglutaryl coenzyme A reductase [Source:RefSeq peptide;Acc:NP_498626]
99. M04B2.1 mep-1 14260 7.112 0.947 0.983 0.975 0.983 0.863 0.838 0.705 0.818 MOG interacting and ectopic P-granules protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21502]
100. F55H2.7 F55H2.7 1670 7.11 0.888 0.964 0.896 0.964 0.907 0.925 0.783 0.783

There are 2435 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA