C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F54F2.8

Gene ID Gene Name Reads Transcripts Annotation
F54F2.8 prx-19 15821 F54F2.8.1, F54F2.8.2 Putative peroxisomal biogenesis factor 19 [Source:UniProtKB/Swiss-Prot;Acc:P34453]

Genes with expression patterns similar to F54F2.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54F2.8 prx-19 15821 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Putative peroxisomal biogenesis factor 19 [Source:UniProtKB/Swiss-Prot;Acc:P34453]
2. T05H10.5 ufd-2 30044 7.626 0.956 0.965 0.978 0.965 0.959 0.955 0.909 0.939 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
3. F43E2.7 mtch-1 30689 7.613 0.962 0.979 0.984 0.979 0.945 0.962 0.870 0.932 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
4. Y71G12B.15 ubc-3 9409 7.584 0.960 0.968 0.957 0.968 0.967 0.953 0.905 0.906 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001293441]
5. R10E11.1 cbp-1 20447 7.555 0.969 0.973 0.964 0.973 0.964 0.934 0.855 0.923
6. Y63D3A.8 Y63D3A.8 9808 7.543 0.914 0.965 0.932 0.965 0.968 0.948 0.892 0.959
7. Y57G11C.12 nuo-3 34963 7.521 0.948 0.948 0.967 0.948 0.970 0.934 0.904 0.902 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_502790]
8. C33A12.3 C33A12.3 8034 7.517 0.947 0.937 0.929 0.937 0.963 0.949 0.923 0.932
9. T26A5.9 dlc-1 59038 7.515 0.984 0.966 0.987 0.966 0.938 0.901 0.852 0.921 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
10. M7.1 let-70 85699 7.514 0.977 0.975 0.982 0.975 0.939 0.907 0.863 0.896 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
11. T04D1.3 unc-57 12126 7.511 0.968 0.971 0.959 0.971 0.961 0.926 0.857 0.898 Endophilin [Source:UniProtKB/TrEMBL;Acc:Q6TM46]
12. F42G9.1 F42G9.1 16349 7.501 0.893 0.939 0.941 0.939 0.972 0.958 0.916 0.943 Probable protein phosphatase 2C F42G9.1 [Source:UniProtKB/Swiss-Prot;Acc:P49595]
13. F25D1.1 ppm-1 16992 7.489 0.958 0.977 0.971 0.977 0.962 0.895 0.856 0.893 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
14. C34E10.1 gop-3 11393 7.478 0.930 0.957 0.984 0.957 0.950 0.955 0.848 0.897 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
15. C35B1.1 ubc-1 13805 7.473 0.947 0.927 0.980 0.927 0.941 0.950 0.864 0.937 Ubiquitin-conjugating enzyme E2 1 [Source:UniProtKB/Swiss-Prot;Acc:P52478]
16. ZK637.3 lnkn-1 16095 7.467 0.957 0.980 0.985 0.980 0.906 0.914 0.844 0.901 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
17. F38H4.9 let-92 25368 7.462 0.973 0.975 0.962 0.975 0.950 0.895 0.831 0.901 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
18. Y57A10A.18 pqn-87 31844 7.459 0.928 0.959 0.976 0.959 0.950 0.923 0.825 0.939 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
19. ZK370.5 pdhk-2 9358 7.459 0.970 0.978 0.969 0.978 0.965 0.895 0.850 0.854 Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q02332]
20. F10D11.1 sod-2 7480 7.458 0.977 0.975 0.979 0.975 0.963 0.920 0.810 0.859 Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P31161]
21. F23B12.5 dlat-1 15659 7.457 0.907 0.918 0.941 0.918 0.971 0.945 0.892 0.965 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19749]
22. F08F8.3 kap-1 31437 7.455 0.958 0.969 0.964 0.969 0.938 0.919 0.842 0.896 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
23. ZK809.5 ZK809.5 5228 7.452 0.919 0.953 0.923 0.953 0.962 0.915 0.915 0.912
24. R05F9.1 btbd-10 10716 7.449 0.968 0.950 0.929 0.950 0.953 0.922 0.898 0.879 BTB/POZ Domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_740982]
25. B0286.4 ntl-2 14207 7.447 0.955 0.976 0.945 0.976 0.957 0.885 0.864 0.889 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
26. R05D11.3 ran-4 15494 7.447 0.978 0.977 0.981 0.977 0.905 0.901 0.839 0.889 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
27. F40F9.7 drap-1 10298 7.443 0.967 0.972 0.950 0.972 0.953 0.926 0.864 0.839 DRAP1 corepressor homolog [Source:RefSeq peptide;Acc:NP_001023907]
28. R07G3.1 cdc-42 35737 7.438 0.983 0.984 0.977 0.984 0.943 0.847 0.809 0.911 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
29. T12D8.6 mlc-5 19567 7.431 0.983 0.979 0.966 0.979 0.959 0.884 0.848 0.833 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
30. C39F7.4 rab-1 44088 7.431 0.979 0.980 0.977 0.980 0.961 0.862 0.793 0.899 RAB family [Source:RefSeq peptide;Acc:NP_503397]
31. W02B12.9 mfn-1 7309 7.431 0.909 0.967 0.953 0.967 0.938 0.908 0.893 0.896 Mitoferrin [Source:UniProtKB/Swiss-Prot;Acc:Q23125]
32. Y45G12B.1 nuo-5 30790 7.424 0.911 0.906 0.927 0.906 0.965 0.958 0.930 0.921 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_503733]
33. F43G9.1 idha-1 35495 7.423 0.919 0.910 0.934 0.910 0.965 0.965 0.891 0.929 Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93714]
34. Y73B6BL.6 sqd-1 41708 7.42 0.932 0.968 0.977 0.968 0.933 0.911 0.845 0.886 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
35. F33D11.11 vpr-1 18001 7.418 0.970 0.975 0.959 0.975 0.950 0.912 0.780 0.897 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
36. F26E4.1 sur-6 16191 7.415 0.959 0.976 0.941 0.976 0.943 0.897 0.857 0.866 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
37. Y54G2A.2 atln-1 16823 7.415 0.972 0.970 0.967 0.970 0.947 0.875 0.781 0.933 ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
38. F35G12.2 idhg-1 30065 7.41 0.945 0.944 0.978 0.944 0.960 0.916 0.857 0.866 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
39. ZC518.3 ccr-4 15531 7.409 0.962 0.958 0.929 0.958 0.937 0.926 0.872 0.867 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
40. T23H2.5 rab-10 31382 7.408 0.975 0.975 0.962 0.975 0.941 0.880 0.795 0.905 RAB family [Source:RefSeq peptide;Acc:NP_491857]
41. F08F8.2 hmgr-1 6483 7.408 0.946 0.963 0.984 0.963 0.938 0.895 0.814 0.905 3-hydroxy-3-methylglutaryl coenzyme A reductase [Source:RefSeq peptide;Acc:NP_498626]
42. C16A3.6 C16A3.6 11397 7.407 0.924 0.901 0.891 0.901 0.979 0.971 0.882 0.958
43. Y62E10A.10 emc-3 8138 7.404 0.954 0.973 0.964 0.973 0.967 0.869 0.860 0.844 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_502575]
44. Y56A3A.20 ccf-1 18463 7.403 0.954 0.962 0.965 0.962 0.950 0.924 0.828 0.858 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
45. R10E12.1 alx-1 10631 7.402 0.961 0.961 0.958 0.961 0.949 0.890 0.810 0.912 Apoptosis-linked gene 2-interacting protein X 1 [Source:UniProtKB/Swiss-Prot;Acc:P34552]
46. F39B2.10 dnj-12 35162 7.402 0.956 0.963 0.964 0.963 0.968 0.878 0.826 0.884 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
47. Y56A3A.22 Y56A3A.22 2747 7.395 0.935 0.933 0.959 0.933 0.966 0.933 0.847 0.889
48. K10C3.2 ensa-1 19836 7.39 0.982 0.964 0.949 0.964 0.927 0.923 0.844 0.837 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
49. W10D5.2 nduf-7 21374 7.388 0.919 0.902 0.886 0.902 0.983 0.962 0.895 0.939 Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94360]
50. F29F11.6 gsp-1 27907 7.387 0.952 0.955 0.969 0.955 0.947 0.888 0.837 0.884 Serine/threonine-protein phosphatase PP1-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q27497]
51. D1014.3 snap-1 16776 7.381 0.978 0.969 0.963 0.969 0.954 0.874 0.782 0.892 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
52. B0205.7 kin-3 29775 7.38 0.947 0.942 0.980 0.942 0.943 0.894 0.871 0.861 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
53. ZK652.3 ufm-1 12647 7.379 0.978 0.958 0.970 0.958 0.943 0.855 0.805 0.912 Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
54. R05F9.10 sgt-1 35541 7.378 0.962 0.968 0.983 0.968 0.954 0.874 0.814 0.855 Small Glutamine-rich Tetratrico repeat protein [Source:RefSeq peptide;Acc:NP_494893]
55. K02B2.3 mcu-1 20448 7.375 0.976 0.971 0.968 0.971 0.894 0.854 0.867 0.874 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
56. K06A5.6 acdh-3 6392 7.369 0.951 0.978 0.924 0.978 0.942 0.896 0.855 0.845 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_491859]
57. H21P03.3 sms-1 7737 7.366 0.971 0.977 0.949 0.977 0.917 0.858 0.805 0.912 Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3D4]
58. F55C5.7 rskd-1 4814 7.361 0.963 0.971 0.934 0.971 0.848 0.895 0.840 0.939 Ribosomal protein S6 Kinase Delta homolog [Source:RefSeq peptide;Acc:NP_506082]
59. Y59A8B.9 ebp-3 6183 7.361 0.945 0.979 0.927 0.979 0.930 0.903 0.869 0.829 microtubule End Binding Protein [Source:RefSeq peptide;Acc:NP_507528]
60. F26H11.2 nurf-1 13015 7.359 0.976 0.971 0.974 0.971 0.874 0.896 0.802 0.895 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
61. K04G7.10 rnp-7 11219 7.358 0.900 0.950 0.964 0.950 0.947 0.920 0.846 0.881 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
62. K04G7.4 nuo-4 26042 7.357 0.907 0.900 0.914 0.900 0.957 0.942 0.926 0.911 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_741215]
63. F57B9.2 let-711 8592 7.355 0.959 0.955 0.949 0.955 0.917 0.904 0.805 0.911 NTL-1a; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q20937]
64. F53A3.4 pqn-41 6366 7.354 0.930 0.952 0.924 0.952 0.945 0.908 0.849 0.894 Polyglutamine-repeat protein pqn-41 [Source:UniProtKB/Swiss-Prot;Acc:C7IVR4]
65. C30H6.8 C30H6.8 3173 7.354 0.916 0.972 0.951 0.972 0.964 0.899 0.842 0.838
66. C16C10.11 har-1 65692 7.351 0.890 0.939 0.905 0.939 0.955 0.925 0.902 0.896 Hemiasterlin resistant protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09254]
67. W02F12.5 dlst-1 55841 7.351 0.938 0.891 0.944 0.891 0.946 0.950 0.846 0.945 DihydroLipoamide S-SuccinylTransferase [Source:RefSeq peptide;Acc:NP_504700]
68. C09G12.9 tsg-101 9451 7.351 0.974 0.949 0.947 0.949 0.933 0.880 0.834 0.885 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
69. B0261.2 let-363 8628 7.35 0.962 0.976 0.963 0.976 0.948 0.879 0.786 0.860 Target of rapamycin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Q95]
70. F36H9.3 dhs-13 21659 7.349 0.958 0.979 0.971 0.979 0.936 0.880 0.850 0.796 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_503501]
71. F41E6.9 vps-60 4469 7.348 0.956 0.965 0.969 0.965 0.932 0.902 0.828 0.831 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
72. C33H5.17 zgpa-1 7873 7.348 0.938 0.977 0.932 0.977 0.939 0.935 0.783 0.867 Zinc finger G-PAtch domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_501296]
73. F39B2.2 uev-1 13597 7.348 0.966 0.948 0.973 0.948 0.952 0.896 0.835 0.830 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
74. Y38A8.2 pbs-3 18117 7.348 0.970 0.952 0.967 0.952 0.966 0.876 0.825 0.840 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
75. ZK1248.14 fzo-1 3583 7.347 0.938 0.934 0.954 0.934 0.909 0.895 0.867 0.916 Transmembrane GTPase fzo-1 [Source:UniProtKB/Swiss-Prot;Acc:Q23424]
76. ZK792.6 let-60 16967 7.346 0.961 0.979 0.985 0.979 0.884 0.894 0.790 0.874 Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
77. F58G11.1 letm-1 13414 7.346 0.969 0.960 0.971 0.960 0.955 0.890 0.812 0.829 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
78. T03D3.5 T03D3.5 2636 7.345 0.873 0.921 0.894 0.921 0.939 0.964 0.891 0.942
79. F39B2.11 mtx-1 8526 7.343 0.967 0.963 0.969 0.963 0.937 0.916 0.784 0.844 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
80. M106.5 cap-2 11395 7.343 0.953 0.969 0.973 0.969 0.885 0.904 0.788 0.902 F-actin-capping protein subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P34686]
81. B0035.14 dnj-1 5412 7.343 0.966 0.963 0.959 0.963 0.964 0.878 0.851 0.799 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001263785]
82. C47G2.5 saps-1 7555 7.343 0.962 0.967 0.939 0.967 0.964 0.867 0.809 0.868 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
83. Y59A8B.7 ebp-1 6297 7.343 0.963 0.967 0.944 0.967 0.934 0.879 0.844 0.845 microtubule End Binding Protein [Source:RefSeq peptide;Acc:NP_507526]
84. C46C2.1 wnk-1 15184 7.341 0.921 0.971 0.958 0.971 0.945 0.867 0.793 0.915 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
85. C06C3.1 mel-11 10375 7.34 0.928 0.957 0.954 0.957 0.965 0.898 0.782 0.899 MEL-11; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEB3]
86. C17H12.1 dyci-1 9858 7.336 0.955 0.969 0.977 0.969 0.951 0.900 0.839 0.776 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
87. F48E8.5 paa-1 39773 7.336 0.958 0.972 0.975 0.972 0.933 0.903 0.768 0.855 Probable serine/threonine-protein phosphatase PP2A regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q09543]
88. Y79H2A.6 arx-3 17398 7.335 0.980 0.971 0.976 0.971 0.905 0.873 0.754 0.905 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
89. F10F2.1 sel-2 8706 7.335 0.942 0.955 0.978 0.955 0.946 0.910 0.761 0.888 Putative neurobeachin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19317]
90. Y102A5A.1 cand-1 11808 7.334 0.934 0.975 0.967 0.975 0.941 0.903 0.807 0.832 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
91. F56D2.1 ucr-1 38050 7.333 0.861 0.899 0.881 0.899 0.975 0.960 0.897 0.961 Cytochrome b-c1 complex subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P98080]
92. T24C4.6 zer-1 16051 7.332 0.952 0.976 0.933 0.976 0.958 0.875 0.778 0.884 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
93. C47E12.5 uba-1 36184 7.331 0.974 0.967 0.961 0.967 0.934 0.888 0.776 0.864 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
94. T19A6.3 nepr-1 6606 7.331 0.978 0.958 0.979 0.958 0.912 0.860 0.855 0.831 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
95. R04F11.3 R04F11.3 10000 7.33 0.868 0.964 0.857 0.964 0.956 0.946 0.856 0.919
96. K05C4.1 pbs-5 17648 7.329 0.973 0.965 0.966 0.965 0.967 0.879 0.783 0.831 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
97. Y32F6A.3 pap-1 11972 7.329 0.955 0.974 0.974 0.974 0.942 0.872 0.852 0.786 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
98. Y77E11A.13 npp-20 5777 7.329 0.978 0.960 0.964 0.960 0.945 0.858 0.795 0.869 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
99. C15H11.4 dhs-22 21674 7.329 0.969 0.962 0.979 0.962 0.924 0.877 0.797 0.859 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
100. T10E9.7 nuo-2 15230 7.326 0.924 0.909 0.961 0.909 0.967 0.932 0.853 0.871 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_491881]

There are 2323 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA