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Results for B0546.2

Gene ID Gene Name Reads Transcripts Annotation
B0546.2 otub-4 2466 B0546.2a, B0546.2b.1, B0546.2b.2, B0546.2b.3 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_500333]

Genes with expression patterns similar to B0546.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0546.2 otub-4 2466 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_500333]
2. F52C9.7 mog-3 9880 7.63 0.943 0.976 0.934 0.976 0.964 0.953 0.964 0.920 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
3. T19B4.2 npp-7 13073 7.615 0.947 0.959 0.922 0.959 0.963 0.971 0.985 0.909 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
4. C08B11.3 swsn-7 11608 7.604 0.955 0.970 0.969 0.970 0.938 0.952 0.914 0.936 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
5. C17E4.10 C17E4.10 7034 7.602 0.955 0.961 0.942 0.961 0.952 0.973 0.938 0.920
6. F32H2.1 snpc-4 7581 7.599 0.933 0.976 0.939 0.976 0.937 0.952 0.960 0.926 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
7. Y54E5A.4 npp-4 6288 7.589 0.975 0.958 0.929 0.958 0.960 0.981 0.948 0.880 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
8. F23F1.1 nfyc-1 9983 7.583 0.960 0.968 0.926 0.968 0.960 0.959 0.980 0.862 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
9. B0035.3 B0035.3 4118 7.581 0.956 0.960 0.936 0.960 0.947 0.979 0.954 0.889
10. C02B10.5 C02B10.5 9171 7.565 0.956 0.934 0.960 0.934 0.957 0.978 0.965 0.881
11. C37A2.2 pqn-20 10913 7.56 0.967 0.959 0.955 0.959 0.917 0.964 0.933 0.906 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
12. C10C5.6 daf-15 8724 7.56 0.943 0.973 0.959 0.973 0.953 0.969 0.920 0.870 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
13. C27B7.1 spr-2 14958 7.556 0.946 0.972 0.943 0.972 0.944 0.965 0.947 0.867 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
14. Y43F4B.4 npp-18 4780 7.551 0.955 0.949 0.973 0.949 0.953 0.958 0.969 0.845 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
15. F18A1.3 lir-1 2995 7.541 0.924 0.952 0.938 0.952 0.968 0.945 0.964 0.898 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
16. C07G1.3 pct-1 10635 7.541 0.938 0.980 0.962 0.980 0.954 0.966 0.927 0.834 Cyclin-dependent kinase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8I7M8]
17. C48E7.3 lpd-2 10330 7.538 0.937 0.955 0.915 0.955 0.971 0.957 0.962 0.886 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
18. ZK177.8 ZK177.8 3403 7.538 0.960 0.931 0.930 0.931 0.977 0.963 0.965 0.881
19. T10F2.4 prp-19 11298 7.537 0.958 0.949 0.900 0.949 0.962 0.958 0.940 0.921 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
20. C53A5.3 hda-1 18413 7.535 0.952 0.972 0.960 0.972 0.943 0.937 0.903 0.896 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
21. T12D8.3 acbp-5 6816 7.533 0.937 0.952 0.938 0.952 0.959 0.952 0.957 0.886 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
22. C43E11.3 met-1 7581 7.531 0.904 0.957 0.975 0.957 0.958 0.977 0.893 0.910 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]
23. C09G4.3 cks-1 17852 7.531 0.956 0.966 0.963 0.966 0.970 0.946 0.929 0.835 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
24. T05E11.4 spo-11 2806 7.53 0.975 0.967 0.963 0.967 0.949 0.938 0.894 0.877 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
25. W02F12.6 sna-1 7338 7.53 0.977 0.964 0.907 0.964 0.975 0.941 0.936 0.866 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
26. ZK856.12 hpo-40 7855 7.529 0.955 0.938 0.944 0.938 0.972 0.955 0.962 0.865
27. C02B10.2 snpn-1 5519 7.527 0.948 0.966 0.979 0.966 0.952 0.922 0.936 0.858 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
28. Y54E2A.3 tac-1 6308 7.527 0.966 0.944 0.917 0.944 0.971 0.968 0.967 0.850 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
29. Y105E8A.17 ekl-4 4732 7.524 0.955 0.957 0.952 0.957 0.967 0.948 0.915 0.873
30. Y56A3A.20 ccf-1 18463 7.523 0.970 0.961 0.923 0.961 0.944 0.969 0.916 0.879 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
31. CC4.3 smu-1 4169 7.522 0.946 0.970 0.928 0.970 0.933 0.935 0.916 0.924 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
32. K10C3.2 ensa-1 19836 7.522 0.940 0.969 0.960 0.969 0.938 0.944 0.931 0.871 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
33. ZK686.4 snu-23 9040 7.522 0.956 0.957 0.946 0.957 0.956 0.972 0.911 0.867 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
34. F32H2.4 thoc-3 3861 7.521 0.961 0.954 0.923 0.954 0.977 0.973 0.924 0.855 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
35. B0495.6 moa-2 6366 7.521 0.932 0.960 0.896 0.960 0.965 0.957 0.934 0.917
36. T05H10.2 apn-1 5628 7.521 0.939 0.964 0.946 0.964 0.955 0.959 0.946 0.848 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
37. C36B1.8 gls-1 8617 7.52 0.970 0.958 0.942 0.958 0.945 0.960 0.929 0.858 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
38. H38K22.1 evl-14 3704 7.52 0.923 0.971 0.961 0.971 0.968 0.959 0.864 0.903
39. F10G7.3 unc-85 5206 7.52 0.970 0.960 0.967 0.960 0.909 0.933 0.955 0.866 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
40. K08E3.8 mdt-29 4678 7.519 0.939 0.960 0.894 0.960 0.969 0.955 0.960 0.882 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
41. C08B11.5 sap-49 10553 7.517 0.933 0.952 0.898 0.952 0.969 0.972 0.962 0.879 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
42. F25B3.6 rtfo-1 11965 7.516 0.915 0.963 0.963 0.963 0.942 0.973 0.963 0.834 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
43. T10C6.4 srx-44 8454 7.516 0.962 0.965 0.929 0.965 0.953 0.967 0.938 0.837 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
44. T13F2.7 sna-2 4771 7.515 0.924 0.950 0.961 0.950 0.972 0.946 0.928 0.884 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
45. Y102A5A.1 cand-1 11808 7.514 0.932 0.967 0.918 0.967 0.959 0.963 0.941 0.867 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
46. K12D12.2 npp-3 6914 7.514 0.937 0.954 0.932 0.954 0.952 0.952 0.952 0.881 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
47. F25B3.1 ehbp-1 6409 7.513 0.946 0.963 0.956 0.963 0.963 0.918 0.921 0.883 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
48. Y37D8A.9 mrg-1 14369 7.513 0.946 0.960 0.960 0.960 0.935 0.937 0.947 0.868 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
49. ZK856.13 tftc-3 2960 7.51 0.932 0.955 0.951 0.955 0.950 0.925 0.945 0.897 Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_505626]
50. Y71G12B.9 lin-65 7476 7.51 0.963 0.961 0.901 0.961 0.953 0.950 0.950 0.871 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
51. Y41D4B.19 npp-8 12992 7.51 0.953 0.948 0.913 0.948 0.949 0.950 0.953 0.896 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
52. K11D12.2 pqn-51 15951 7.509 0.956 0.955 0.937 0.955 0.978 0.972 0.933 0.823 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
53. Y71D11A.2 smr-1 4976 7.509 0.939 0.962 0.949 0.962 0.967 0.965 0.908 0.857 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
54. Y46G5A.4 snrp-200 13827 7.509 0.943 0.939 0.929 0.939 0.970 0.952 0.968 0.869 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
55. E01A2.4 let-504 9788 7.508 0.936 0.956 0.883 0.956 0.984 0.935 0.955 0.903
56. F36D4.3 hum-2 16493 7.508 0.972 0.948 0.969 0.948 0.941 0.940 0.928 0.862 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
57. F54E7.3 par-3 8773 7.507 0.890 0.971 0.945 0.971 0.940 0.963 0.951 0.876 Partitioning defective protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q17353]
58. T26A5.7 set-1 6948 7.506 0.887 0.966 0.950 0.966 0.975 0.935 0.964 0.863 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
59. C28H8.9 dpff-1 8684 7.505 0.955 0.962 0.955 0.962 0.965 0.967 0.916 0.823 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
60. C15H11.4 dhs-22 21674 7.504 0.970 0.966 0.920 0.966 0.945 0.954 0.931 0.852 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
61. F32D1.10 mcm-7 21233 7.503 0.900 0.966 0.957 0.966 0.915 0.928 0.944 0.927 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
62. F53A3.2 polh-1 2467 7.503 0.933 0.945 0.961 0.945 0.926 0.955 0.966 0.872 POLH (DNA polymerase eta) homolog [Source:RefSeq peptide;Acc:NP_497480]
63. W03F9.5 ttb-1 8682 7.503 0.970 0.972 0.955 0.972 0.916 0.914 0.916 0.888 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
64. F56D1.4 clr-1 8615 7.503 0.873 0.977 0.963 0.977 0.947 0.964 0.925 0.877 Receptor-type tyrosine-protein phosphatase [Source:UniProtKB/Swiss-Prot;Acc:H2KZM6]
65. F32A5.7 lsm-4 3785 7.502 0.936 0.952 0.903 0.952 0.963 0.963 0.949 0.884 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
66. T09A5.8 cec-3 5813 7.502 0.905 0.971 0.914 0.971 0.958 0.958 0.954 0.871 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
67. W02D3.11 hrpf-1 4125 7.501 0.924 0.954 0.935 0.954 0.943 0.921 0.926 0.944 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_740877]
68. C25H3.6 mdt-26 9423 7.501 0.912 0.968 0.956 0.968 0.979 0.958 0.852 0.908 MeDiaTor [Source:RefSeq peptide;Acc:NP_495108]
69. R12C12.2 ran-5 14517 7.501 0.965 0.962 0.925 0.962 0.941 0.962 0.970 0.814 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
70. F58B6.3 par-2 3914 7.501 0.955 0.940 0.963 0.940 0.947 0.936 0.910 0.910
71. C36A4.8 brc-1 1664 7.501 0.959 0.961 0.907 0.961 0.943 0.924 0.961 0.885 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
72. ZK1320.12 taf-8 3558 7.501 0.965 0.959 0.928 0.959 0.953 0.883 0.959 0.895 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
73. T25G3.3 T25G3.3 7285 7.5 0.945 0.937 0.941 0.937 0.952 0.933 0.972 0.883
74. C26E6.7 eri-9 8069 7.499 0.941 0.971 0.938 0.971 0.901 0.947 0.967 0.863 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
75. C17G10.4 cdc-14 6262 7.498 0.962 0.944 0.943 0.944 0.960 0.933 0.913 0.899 Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
76. Y43E12A.1 cyb-2.1 12500 7.497 0.885 0.958 0.955 0.958 0.979 0.893 0.958 0.911 CYclin B [Source:RefSeq peptide;Acc:NP_502047]
77. Y55F3AM.12 dcap-1 8679 7.497 0.939 0.961 0.936 0.961 0.923 0.942 0.901 0.934 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
78. F18E2.3 scc-3 13464 7.493 0.969 0.957 0.950 0.957 0.953 0.926 0.905 0.876 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
79. C18G1.5 hil-4 21692 7.493 0.942 0.961 0.921 0.961 0.950 0.927 0.946 0.885 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
80. Y53H1A.5 nfya-2 4166 7.493 0.922 0.960 0.917 0.960 0.953 0.950 0.932 0.899 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
81. D1054.15 plrg-1 2282 7.492 0.959 0.967 0.925 0.967 0.928 0.922 0.952 0.872 PLeiotropic ReGulator (vertebrate) homolog [Source:RefSeq peptide;Acc:NP_001256260]
82. F26A1.1 F26A1.1 2622 7.491 0.971 0.969 0.948 0.969 0.945 0.957 0.868 0.864
83. Y11D7A.12 flh-1 4612 7.491 0.901 0.963 0.973 0.963 0.951 0.941 0.910 0.889 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
84. F42A6.7 hrp-1 28201 7.491 0.941 0.952 0.915 0.952 0.960 0.950 0.966 0.855 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
85. Y47G6A.2 inx-22 3576 7.491 0.929 0.961 0.952 0.961 0.949 0.931 0.882 0.926 Innexin [Source:RefSeq peptide;Acc:NP_491186]
86. C05C8.6 hpo-9 8263 7.49 0.962 0.954 0.945 0.954 0.965 0.959 0.952 0.799
87. Y46G5A.5 pisy-1 13040 7.49 0.958 0.946 0.957 0.946 0.928 0.939 0.951 0.865 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
88. T04A8.14 emb-5 11746 7.49 0.954 0.963 0.951 0.963 0.944 0.974 0.929 0.812 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
89. ZK742.1 xpo-1 20741 7.488 0.943 0.943 0.907 0.943 0.958 0.960 0.935 0.899 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
90. ZK858.1 gld-4 14162 7.488 0.974 0.970 0.914 0.970 0.955 0.958 0.863 0.884 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
91. K02F2.3 teg-4 3873 7.488 0.949 0.935 0.925 0.935 0.945 0.949 0.981 0.869 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
92. F49E8.1 nprl-2 1851 7.488 0.947 0.925 0.926 0.925 0.952 0.974 0.957 0.882 LOW QUALITY PROTEIN: Nitrogen Permease Regulator Like homolog [Source:RefSeq peptide;Acc:NP_001294159]
93. T18H9.6 mdt-27 5418 7.487 0.888 0.969 0.942 0.969 0.945 0.967 0.957 0.850 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]
94. Y39G10AR.7 ekl-7 7072 7.487 0.942 0.946 0.939 0.946 0.961 0.945 0.944 0.864
95. R05H5.3 R05H5.3 15041 7.487 0.935 0.965 0.946 0.965 0.960 0.899 0.900 0.917
96. F11A10.2 repo-1 2791 7.487 0.944 0.941 0.942 0.941 0.947 0.952 0.954 0.866 REversed POlarity in early embryos [Source:RefSeq peptide;Acc:NP_502290]
97. R144.4 wip-1 14168 7.487 0.942 0.965 0.956 0.965 0.941 0.936 0.956 0.826 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
98. ZC395.8 ztf-8 5521 7.486 0.910 0.952 0.938 0.952 0.982 0.939 0.929 0.884 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
99. F37E3.1 ncbp-1 5649 7.486 0.958 0.961 0.962 0.961 0.946 0.958 0.918 0.822 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
100. T10F2.3 ulp-1 8351 7.485 0.963 0.952 0.945 0.952 0.941 0.907 0.918 0.907 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA