C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm4, section s38.

Sample reads: 288,909. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 1010.00 3495.98 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. F54E7.2 rps-12 1010.00 3495.98 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
3. Y24D9A.4 rpl-7A 1010.00 3495.98 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
4. B0041.4 rpl-4 920.00 3184.46 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
5. F13B10.2 rpl-3 920.00 3184.46 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
6. C49H3.11 rps-2 885.00 3063.31 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
7. T27E9.1 ant-1.1 885.00 3063.31 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
8. F42C5.8 rps-8 855.00 2959.47 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
9. F59D8.2 vit-4 828.00 2866.01 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
10. T04C12.4 act-3 828.00 2866.01 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
11. C44B12.5 perm-4 804.00 2782.94 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
12. T04C12.6 act-1 804.00 2782.94 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
13. C42D8.2 vit-2 743.00 2571.80 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
14. K02F2.2 ahcy-1 725.00 2509.49 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
15. F57F4.4 F57F4.4 708.00 2450.65
16. C07H6.5 cgh-1 693.00 2398.73 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
17. R05G6.7 vdac-1 693.00 2398.73 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
18. Y18D10A.17 car-1 693.00 2398.73 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
19. E04A4.7 cyc-2.1 664.00 2298.35 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
20. F56E10.4 rps-27 651.00 2253.35 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
21. M03F4.2 act-4 639.00 2211.82 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
22. ZC434.2 rps-7 639.00 2211.82 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
23. B0250.1 rpl-2 616.00 2132.20 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
24. F02A9.3 far-2 616.00 2132.20 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
25. R13A5.8 rpl-9 605.00 2094.13 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
26. Y82E9BR.3 Y82E9BR.3 594.00 2056.05 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
27. W09C5.6 rpl-31 584.00 2021.44 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
28. Y71F9AL.13 rpl-1 584.00 2021.44 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
29. F10B5.1 rpl-10 575.00 1990.29 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
30. F40F11.1 rps-11 575.00 1990.29 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
31. C04F12.4 rpl-14 565.00 1955.67 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
32. F25H2.5 ndk-1 565.00 1955.67 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
33. C17F4.7 C17F4.7 556.00 1924.52
34. D1007.6 rps-10 556.00 1924.52 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
35. K08D12.6 K08D12.6 548.00 1896.83
36. Y105E8A.16 rps-20 548.00 1896.83 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
37. C56C10.8 icd-1 539.00 1865.68 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
38. D1054.11 D1054.11 539.00 1865.68
39. K07H8.10 K07H8.10 539.00 1865.68
40. F21F8.7 asp-6 531.00 1837.99 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
41. F59D8.1 vit-3 531.00 1837.99 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
42. Y71A12B.1 rps-6 531.00 1837.99 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
43. R10E11.8 vha-1 516.00 1786.07 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
44. RIT1P.688 516.00 1786.07
45. Y57G11C.15 sec-61 508.00 1758.38 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
46. T04C12.5 act-2 501.00 1734.15 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
47. T22F3.4 rpl-11.1 501.00 1734.15 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
48. F54C9.5 rpl-5 494.00 1709.92 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
49. K07H8.6 vit-6 494.00 1709.92 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
50. C14B9.7 rpl-21 487.00 1685.69 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
51. D2096.8 nap-1 481.00 1664.92 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
52. F57B9.5 byn-1 481.00 1664.92 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
53. T07A9.14 T07A9.14 481.00 1664.92
54. W08E12.7 W08E12.7 481.00 1664.92
55. F11C3.3 unc-54 474.00 1640.69 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
56. C42C1.14 rpl-34 468.00 1619.92 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
57. Y45F10D.12 rpl-18 468.00 1619.92 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
58. F01G4.6 F01G4.6 462.00 1599.15 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
59. M01F1.2 rpl-16 462.00 1599.15 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
60. Y106G6H.2 pab-1 456.00 1578.38 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
61. C08H9.2 vgln-1 450.00 1557.62 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
62. F28C6.7 rpl-26 450.00 1557.62 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
63. Y69A2AR.18 Y69A2AR.18 450.00 1557.62
64. F36A2.6 rps-15 444.00 1536.85 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
65. C34E10.6 atp-2 439.00 1519.54 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
66. C39D10.7 C39D10.7 439.00 1519.54
67. F40F8.10 rps-9 439.00 1519.54 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
68. M7.1 let-70 433.00 1498.77 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
69. F39B2.6 rps-26 422.00 1460.70 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
70. F46F11.2 cey-2 422.00 1460.70 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
71. F52B5.6 rpl-25.2 417.00 1443.39 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
72. F25H2.10 rla-0 412.00 1426.08 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
73. R151.3 rpl-6 412.00 1426.08 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
74. T05F1.3 rps-19 412.00 1426.08 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
75. K11H12.2 rpl-15 407.00 1408.78 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
76. Y39B6A.20 asp-1 402.00 1391.47 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_741677]
77. Y48B6A.2 rpl-43 402.00 1391.47 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
78. B0393.1 rps-0 393.00 1360.32 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
79. F09F7.2 mlc-3 388.00 1343.01 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
80. F07A5.7 unc-15 384.00 1329.17 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
81. H02I12.1 cbd-1 384.00 1329.17 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
82. F26D10.3 hsp-1 379.00 1311.86 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
83. F27C1.7 atp-3 375.00 1298.01 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
84. Y75B12B.2 cyn-7 375.00 1298.01 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
85. C44B12.1 perm-2 366.00 1266.86 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500042]
86. T01C3.6 rps-16 362.00 1253.02 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
87. Y71F9AM.6 trap-1 358.00 1239.17 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_491076]
88. C09H10.2 rpl-41 354.00 1225.33 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
89. F35C5.6 clec-63 354.00 1225.33 C-type LECtin [Source:RefSeq peptide;Acc:NP_496743]
90. F56F3.5 rps-1 354.00 1225.33 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
91. K02B2.5 rps-25 354.00 1225.33 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
92. T03E6.7 cpl-1 354.00 1225.33 CathePsin L family [Source:RefSeq peptide;Acc:NP_001256718]
93. Y48B6A.14 hmg-1.1 354.00 1225.33 HMG [Source:RefSeq peptide;Acc:NP_496970]
94. Y49A3A.3 Y49A3A.3 354.00 1225.33
95. F28D1.7 rps-23 350.00 1211.48 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
96. Y113G7B.17 prmt-1 350.00 1211.48 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
97. C06A1.1 cdc-48.1 346.00 1197.63 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
98. F57B1.4 col-160 346.00 1197.63 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
99. C49F5.1 sams-1 342.00 1183.79 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
100. C47E8.11 C47E8.11 339.00 1173.40
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA