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Experiment herm1, section s36.

Sample reads: 215,435. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 3180.00 14760.85 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. C04F12.4 rpl-14 1240.00 5755.80 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
3. F42C5.8 rps-8 1140.00 5291.63 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
4. F31E3.5 eef-1A.1 1060.00 4920.28 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
5. F40F11.1 rps-11 1060.00 4920.28 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
6. ZC434.2 rps-7 1060.00 4920.28 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
7. W09C5.6 rpl-31 1010.00 4688.20 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
8. D1007.6 rps-10 959.00 4451.46 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
9. C49H3.11 rps-2 885.00 4107.97 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
10. F13B10.2 rpl-3 885.00 4107.97 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
11. Y24D9A.4 rpl-7A 885.00 4107.97 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
12. Y71F9AL.13 rpl-1 885.00 4107.97 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
13. B0041.4 rpl-4 855.00 3968.72 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
14. F52B5.6 rpl-25.2 855.00 3968.72 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
15. C42C1.14 rpl-34 828.00 3843.39 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
16. Y105E8A.16 rps-20 828.00 3843.39 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
17. F56E10.4 rps-27 804.00 3731.99 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
18. RIT1P.688 804.00 3731.99
19. C14B9.7 rpl-21 782.00 3629.87 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
20. F25H2.5 ndk-1 782.00 3629.87 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
21. F10B5.1 rpl-10 761.00 3532.39 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
22. F39B2.6 rps-26 761.00 3532.39 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
23. Y48B6A.2 rpl-43 761.00 3532.39 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
24. C09H10.2 rpl-41 725.00 3365.29 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
25. F40F8.10 rps-9 708.00 3286.38 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
26. T22F3.4 rpl-11.1 708.00 3286.38 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
27. Y71A12B.1 rps-6 708.00 3286.38 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
28. E04A4.7 cyc-2.1 693.00 3216.75 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
29. F10E7.7 rpl-33 693.00 3216.75 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
30. F36A2.6 rps-15 693.00 3216.75 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
31. F37C12.9 rps-14 693.00 3216.75 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
32. T07A9.14 T07A9.14 693.00 3216.75
33. F28C6.7 rpl-26 678.00 3147.13 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
34. R09B3.3 R09B3.3 651.00 3021.80
35. B0250.1 rpl-2 627.00 2910.39 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
36. M01F1.2 rpl-16 605.00 2808.28 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
37. Y82E9BR.3 Y82E9BR.3 605.00 2808.28 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
38. ZK1010.1 ubq-2 605.00 2808.28 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
39. T05E11.1 rps-5 584.00 2710.80 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
40. R13A5.8 rpl-9 575.00 2669.02 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
41. R151.3 rpl-6 575.00 2669.02 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
42. T05G5.10 iff-1 575.00 2669.02 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
43. Y45F10D.12 rpl-18 575.00 2669.02 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
44. ZK652.4 rpl-35 575.00 2669.02 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
45. K02B2.5 rps-25 565.00 2622.60 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
46. F28D1.7 rps-23 556.00 2580.83 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
47. F53A3.3 rps-22 548.00 2543.69 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
48. F54C9.5 rpl-5 548.00 2543.69 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
49. F56F3.5 rps-1 539.00 2501.92 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
50. C06B8.8 rpl-38 531.00 2464.78 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
51. C37A2.7 C37A2.7 516.00 2395.16 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
52. T01C3.6 rps-16 516.00 2395.16 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
53. B0513.3 rpl-29 508.00 2358.02 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
54. B0393.1 rps-0 501.00 2325.53 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
55. C26F1.4 rps-30 494.00 2293.04 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
56. C27A2.2 rpl-22 494.00 2293.04 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
57. F37C12.4 rpl-36 487.00 2260.55 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
58. T05F1.3 rps-19 487.00 2260.55 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
59. C16A3.9 rps-13 481.00 2232.70 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
60. Y18D10A.17 car-1 481.00 2232.70 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
61. Y37E3.8 Y37E3.8 481.00 2232.70
62. Y37E3.7 rla-1 468.00 2172.35 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
63. T27E9.1 ant-1.1 462.00 2144.50 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
64. F53G12.10 rpl-7 456.00 2116.65 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
65. D1007.12 rpl-24.1 444.00 2060.95 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
66. Y48B6A.14 hmg-1.1 444.00 2060.95 HMG [Source:RefSeq peptide;Acc:NP_496970]
67. Y75B12B.2 cyn-7 444.00 2060.95 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
68. F25H2.10 rla-0 439.00 2037.74 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
69. T24B8.1 rpl-32 428.00 1986.68 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
70. C32E8.2 rpl-13 417.00 1935.62 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
71. Y62E10A.1 rla-2 417.00 1935.62 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
72. F46F11.2 cey-2 412.00 1912.41 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
73. F37C12.11 rps-21 407.00 1889.20 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
74. K08D12.3 K08D12.3 407.00 1889.20
75. K11H12.2 rpl-15 407.00 1889.20 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
76. C07H6.5 cgh-1 402.00 1865.99 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
77. Y48G8AL.8 rpl-17 402.00 1865.99 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
78. F02A9.3 far-2 388.00 1801.01 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
79. Y57G11C.16 rps-18 388.00 1801.01 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
80. C23G10.3 rps-3 384.00 1782.44 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
81. H06I04.4 ubl-1 384.00 1782.44 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
82. R05G6.7 vdac-1 375.00 1740.67 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
83. Y43B11AR.4 rps-4 375.00 1740.67 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
84. T04C12.6 act-1 371.00 1722.10 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
85. Y65B4BR.5 icd-2 371.00 1722.10 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
86. C09D4.5 rpl-19 366.00 1698.89 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
87. W01D2.1 W01D2.1 366.00 1698.89 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
88. C53H9.1 rpl-27 358.00 1661.76 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
89. C56C10.8 icd-1 358.00 1661.76 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
90. K07H8.10 K07H8.10 354.00 1643.19
91. D2096.8 nap-1 350.00 1624.62 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
92. T04C12.4 act-3 350.00 1624.62 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
93. T23G11.3 gld-1 350.00 1624.62 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
94. Y113G7B.17 prmt-1 350.00 1624.62 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
95. H02I12.1 cbd-1 346.00 1606.06 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
96. ZK354.5 msp-51 346.00 1606.06 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
97. B0336.9 swp-1 342.00 1587.49 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
98. R11D1.8 rpl-28 335.00 1555.00 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
99. C34E10.6 atp-2 331.00 1536.43 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
100. T04C12.5 act-2 321.00 1490.01 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA