C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm1, section s35.

Sample reads: 168,125. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 959.00 5704.12 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. F31E3.5 eef-1A.1 920.00 5472.15 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
3. F40F11.1 rps-11 885.00 5263.97 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
4. ZC434.2 rps-7 855.00 5085.53 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
5. C04F12.4 rpl-14 782.00 4651.32 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
6. F42C5.8 rps-8 782.00 4651.32 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
7. Y24D9A.4 rpl-7A 761.00 4526.42 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
8. RIT1P.688 693.00 4121.95
9. C42C1.14 rpl-34 664.00 3949.46 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
10. Y71F9AL.13 rpl-1 664.00 3949.46 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
11. F40F8.10 rps-9 651.00 3872.14 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
12. C49H3.11 rps-2 639.00 3800.76 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
13. F56E10.4 rps-27 639.00 3800.76 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
14. D1007.6 rps-10 627.00 3729.39 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
15. B0041.4 rpl-4 616.00 3663.96 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
16. F10B5.1 rpl-10 616.00 3663.96 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
17. F36A2.6 rps-15 616.00 3663.96 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
18. F52B5.6 rpl-25.2 605.00 3598.53 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
19. F25H2.5 ndk-1 594.00 3533.10 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
20. Y105E8A.16 rps-20 584.00 3473.62 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
21. W09C5.6 rpl-31 565.00 3360.61 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
22. F13B10.2 rpl-3 556.00 3307.08 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
23. B0513.3 rpl-29 548.00 3259.50 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
24. K02B2.5 rps-25 539.00 3205.96 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
25. E04A4.7 cyc-2.1 531.00 3158.38 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
26. Y82E9BR.3 Y82E9BR.3 531.00 3158.38 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
27. F37C12.4 rpl-36 523.00 3110.80 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
28. F39B2.6 rps-26 523.00 3110.80 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
29. Y71A12B.1 rps-6 523.00 3110.80 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
30. C14B9.7 rpl-21 516.00 3069.16 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
31. F28C6.7 rpl-26 516.00 3069.16 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
32. R09B3.3 R09B3.3 516.00 3069.16
33. ZK652.4 rpl-35 516.00 3069.16 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
34. T22F3.4 rpl-11.1 508.00 3021.58 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
35. F37C12.9 rps-14 501.00 2979.94 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
36. Y48B6A.2 rpl-43 494.00 2938.30 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
37. Y45F10D.12 rpl-18 487.00 2896.67 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
38. C06B8.8 rpl-38 474.00 2819.34 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
39. C09H10.2 rpl-41 474.00 2819.34 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
40. T01C3.6 rps-16 474.00 2819.34 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
41. F10E7.7 rpl-33 468.00 2783.66 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
42. F28D1.7 rps-23 468.00 2783.66 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
43. T07A9.14 T07A9.14 468.00 2783.66
44. T05F1.3 rps-19 456.00 2712.28 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
45. M01F1.2 rpl-16 450.00 2676.59 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
46. ZK1010.1 ubq-2 450.00 2676.59 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
47. F54C9.5 rpl-5 444.00 2640.91 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
48. R13A5.8 rpl-9 428.00 2545.74 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
49. R151.3 rpl-6 422.00 2510.05 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
50. T27E9.1 ant-1.1 422.00 2510.05 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
51. C16A3.9 rps-13 412.00 2450.57 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
52. T05E11.1 rps-5 412.00 2450.57 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
53. F02A9.3 far-2 398.00 2367.30 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
54. F56F3.5 rps-1 393.00 2337.56 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
55. K11H12.2 rpl-15 393.00 2337.56 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
56. C37A2.7 C37A2.7 384.00 2284.03 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
57. B0393.1 rps-0 379.00 2254.29 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
58. D1054.11 D1054.11 379.00 2254.29
59. T05G5.10 iff-1 366.00 2176.96 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
60. B0250.1 rpl-2 362.00 2153.17 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
61. C26F1.4 rps-30 358.00 2129.38 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
62. F53A3.3 rps-22 358.00 2129.38 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
63. F53G12.10 rpl-7 358.00 2129.38 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
64. T24B8.1 rpl-32 354.00 2105.59 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
65. W01D2.1 W01D2.1 354.00 2105.59 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
66. Y37D8A.19 Y37D8A.19 354.00 2105.59
67. Y43B11AR.4 rps-4 346.00 2058.00 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
68. D1007.12 rpl-24.1 339.00 2016.37 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
69. Y18D10A.17 car-1 331.00 1968.78 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
70. Y37E3.8 Y37E3.8 331.00 1968.78
71. T04C12.6 act-1 328.00 1950.94 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
72. C27A2.2 rpl-22 324.00 1927.15 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
73. Y75B12B.2 cyn-7 324.00 1927.15 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
74. C23G10.3 rps-3 321.00 1909.30 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
75. T04C12.4 act-3 321.00 1909.30 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
76. Y48G8AL.8 rpl-17 314.00 1867.67 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
77. Y48B6A.14 hmg-1.1 300.00 1784.40 HMG [Source:RefSeq peptide;Acc:NP_496970]
78. Y113G7B.17 prmt-1 297.00 1766.55 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
79. Y62H9A.6 Y62H9A.6 297.00 1766.55
80. ZC373.2 ZC373.2 297.00 1766.55
81. C32E8.2 rpl-13 294.00 1748.71 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
82. D2096.8 nap-1 294.00 1748.71 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
83. K07H8.10 K07H8.10 294.00 1748.71
84. Y37E3.7 rla-1 294.00 1748.71 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
85. R05G6.7 vdac-1 291.00 1730.86 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
86. R11D1.8 rpl-28 291.00 1730.86 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
87. H06I04.4 ubl-1 288.00 1713.02 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
88. C56C10.8 icd-1 285.00 1695.18 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
89. Y57G11C.16 rps-18 285.00 1695.18 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
90. F37C12.11 rps-21 282.00 1677.33 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
91. B0336.9 swp-1 276.00 1641.64 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
92. C34E10.6 atp-2 276.00 1641.64 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
93. C53H9.1 rpl-27 276.00 1641.64 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
94. F25H2.10 rla-0 276.00 1641.64 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
95. Y62E10A.1 rla-2 273.00 1623.80 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
96. F26D10.3 hsp-1 264.00 1570.27 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
97. T04C12.5 act-2 264.00 1570.27 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
98. C09D4.5 rpl-19 261.00 1552.42 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
99. K02F2.2 ahcy-1 251.00 1492.94 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
100. T23G11.3 gld-1 248.00 1475.10 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA