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Experiment herm2, region R9.

Sample reads: 743,945. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. RIT1P.688 3492.88 4695.07
2. F54E7.2 rps-12 3417.71 4594.03 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
3. F36A2.6 rps-15 3413.80 4588.79 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
4. F31E3.5 eef-1A.1 3376.71 4538.92 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
5. F13B10.2 rpl-3 3328.87 4474.62 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
6. E04A4.7 cyc-2.1 3310.32 4449.69 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
7. T27E9.1 ant-1.1 3308.37 4447.07 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
8. B0041.4 rpl-4 3303.49 4440.51 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
9. R13A5.8 rpl-9 3275.18 4402.45 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
10. Y105E8A.16 rps-20 3273.23 4399.83 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
11. C49H3.11 rps-2 3271.28 4397.20 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
12. Y18D10A.17 car-1 3271.28 4397.20 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
13. R05G6.7 vdac-1 3267.37 4391.95 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
14. Y24D9A.4 rpl-7A 3260.54 4382.77 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
15. Y75B12B.2 cyn-7 3251.75 4370.96 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
16. Y71F9AL.13 rpl-1 3243.94 4360.46 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
17. K02F2.2 ahcy-1 3241.01 4356.52 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
18. F59D8.2 vit-4 3239.06 4353.90 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
19. F25H2.5 ndk-1 3234.18 4347.34 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
20. Y69A2AR.18 Y69A2AR.18 3231.25 4343.40
21. K08D12.6 K08D12.6 3224.42 4334.22
22. F59D8.1 vit-3 3218.56 4326.34 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
23. C44B12.5 perm-4 3124.65 4200.11 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
24. F42C5.8 rps-8 1641.01 2205.82 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
25. F37C12.4 rpl-36 1605.86 2158.58 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
26. F56E10.4 rps-27 1605.86 2158.58 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
27. C42C1.14 rpl-34 1566.82 2106.09 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
28. T04C12.6 act-1 1557.05 2092.97 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
29. F57B1.4 col-160 1524.84 2049.67 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
30. F52B5.6 rpl-25.2 1518.00 2040.48 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
31. Y57G11C.15 sec-61 1488.72 2001.11 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
32. K08D12.3 K08D12.3 1486.77 1998.49
33. C04F12.4 rpl-14 1457.48 1959.12 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
34. B0513.3 rpl-29 1405.74 1889.58 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
35. F40F11.1 rps-11 1399.88 1881.70 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
36. ZC434.2 rps-7 1369.62 1841.03 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
37. W09C5.6 rpl-31 1357.91 1825.28 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
38. Y82E9BR.3 Y82E9BR.3 1352.05 1817.41 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
39. T04C12.4 act-3 1330.57 1788.54 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
40. Y71A12B.1 rps-6 1324.71 1780.66 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
41. C56C10.8 icd-1 1322.76 1778.04 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
42. Y45F10D.12 rpl-18 1322.76 1778.04 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
43. D1007.6 rps-10 1319.83 1774.10 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
44. Y56A3A.21 trap-4 1291.52 1736.05 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
45. C14B9.7 rpl-21 1283.71 1725.55 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
46. F10B5.1 rpl-10 1283.71 1725.55 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
47. T04C12.5 act-2 1274.54 1713.22 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
48. K07H8.6 vit-6 1257.55 1690.38 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
49. F39B2.6 rps-26 1241.74 1669.13 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
50. Y106G6H.2 pab-1 1232.95 1657.32 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
51. C07H6.5 cgh-1 1225.14 1646.82 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
52. B0250.1 rpl-2 1198.00 1610.34 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
53. T07A9.14 T07A9.14 1182.19 1589.08
54. T22F3.4 rpl-11.1 1176.33 1581.21 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
55. F57F4.4 F57F4.4 1156.42 1554.44
56. R151.3 rpl-6 1151.93 1548.40 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
57. R10E11.8 vha-1 1129.67 1518.49 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
58. Y48B6A.14 hmg-1.1 1122.64 1509.04 HMG [Source:RefSeq peptide;Acc:NP_496970]
59. M01F1.2 rpl-16 1120.69 1506.41 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
60. K11H12.2 rpl-15 1110.93 1493.29 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
61. W08E12.7 W08E12.7 1109.17 1490.93
62. C42D8.2 vit-2 1107.80 1489.09 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
63. F57B9.5 byn-1 1102.63 1482.14 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
64. M03F4.2 act-4 1091.40 1467.05 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
65. F28C6.7 rpl-26 1088.47 1463.11 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
66. D2096.8 nap-1 1077.73 1448.68 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
67. F02A9.3 far-2 1076.56 1447.10 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
68. B0393.1 rps-0 1069.92 1438.18 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
69. F01G4.6 F01G4.6 1068.36 1436.08 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
70. Y57G11C.16 rps-18 1065.63 1432.40 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
71. K02B2.5 rps-25 1061.14 1426.37 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
72. R09B3.3 R09B3.3 1053.33 1415.87
73. T23G11.3 gld-1 1051.28 1413.11 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
74. T01C3.6 rps-16 1050.40 1411.93 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
75. Y48B6A.2 rpl-43 1046.50 1406.69 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
76. C34F6.2 col-178 1045.52 1405.37 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
77. F26D10.3 hsp-1 1035.76 1392.25 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
78. F11C3.3 unc-54 1033.81 1389.63 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
79. K07H8.10 K07H8.10 1009.40 1356.82
80. C16A3.9 rps-13 1007.45 1354.20 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
81. F46F11.2 cey-2 1006.47 1352.88 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
82. C06B8.8 rpl-38 997.69 1341.07 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
83. F54C9.5 rpl-5 994.37 1336.61 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
84. F53G12.10 rpl-7 991.54 1332.81 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
85. W01D2.1 W01D2.1 983.04 1321.39 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
86. C06A1.1 cdc-48.1 980.50 1317.98 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
87. F40F8.10 rps-9 979.14 1316.14 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
88. F07A5.7 unc-15 972.50 1307.22 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
89. Y48G8AL.8 rpl-17 961.57 1292.52 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
90. Y38H6C.1 dct-16 958.44 1288.32 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
91. C44B12.1 perm-2 955.42 1284.26 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500042]
92. Y38F2AR.9 Y38F2AR.9 943.60 1268.38
93. C24F3.6 col-124 940.97 1264.84 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
94. M7.1 let-70 939.60 1263.00 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
95. C34E10.6 atp-2 913.73 1228.23 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
96. ZK1010.1 ubq-2 913.73 1228.23 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
97. D1054.11 D1054.11 912.17 1226.13
98. Y71F9AM.6 trap-1 906.31 1218.25 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_491076]
99. C09H10.2 rpl-41 903.97 1215.10 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
100. F28D1.7 rps-23 903.97 1215.10 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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